RNA–Protein interactions for RNA: ENST00000602574.5

COMMD3-215, Transcript of COMM domain containing 3, humanhuman

TSL 1 (best)

Gene COMMD3, Length 2,290 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-215ENST00000602574 DLSTP36957 453 aa8.03□□□□□ -1.12
COMMD3-215ENST00000602574 OPRD1P41143 372 aa8.03□□□□□ -1.12
COMMD3-215ENST00000602574 GLRBP48167 497 aa8.03□□□□□ -1.12
COMMD3-215ENST00000602574 RAB9AP51151 201 aa8.03□□□□□ -1.12
COMMD3-215ENST00000602574 CDH12P55289 794 aa8.03□□□□□ -1.12
COMMD3-215ENST00000602574 CAV3P56539 151 aa8.03□□□□□ -1.12
COMMD3-215ENST00000602574 DGCR2P98153 550 aa8.03□□□□□ -1.12
COMMD3-215ENST00000602574 ST3GAL3Q11203 375 aa8.03□□□□□ -1.12
COMMD3-215ENST00000602574 SNAI3Q3KNW1 292 aa8.03□□□□□ -1.12
COMMD3-215ENST00000602574 ZNF678Q5SXM1 525 aa8.03□□□□□ -1.12
COMMD3-215ENST00000602574 PRSS54Q6PEW0 395 aa8.03□□□□□ -1.12
COMMD3-215ENST00000602574 TMED4Q7Z7H5 227 aa8.03□□□□□ -1.12
COMMD3-215ENST00000602574 CALHM1Q8IU99 346 aa8.03□□□□□ -1.12
COMMD3-215ENST00000602574 ZFP41Q8N8Y5 198 aa8.03□□□□□ -1.12
COMMD3-215ENST00000602574 OR4P4Q8NGL7 312 aa8.03□□□□□ -1.12
COMMD3-215ENST00000602574 GLMPQ8WWB7 406 aa8.03□□□□□ -1.12
COMMD3-215ENST00000602574 THAP4Q8WY91 577 aa8.03□□□□□ -1.12
COMMD3-215ENST00000602574 COA1Q9GZY4 146 aa8.03□□□□□ -1.12
COMMD3-215ENST00000602574 MRPS18AQ9NVS2 196 aaKnown RBP8.03□□□□□ -1.12
COMMD3-215ENST00000602574 PLEKHJ1Q9NW61 149 aa8.03□□□□□ -1.12
COMMD3-215ENST00000602574 MARCH2Q9P0N8 246 aa8.03□□□□□ -1.12
COMMD3-215ENST00000602574 WRAP73Q9P2S5 460 aaPredicted RBP8.03□□□□□ -1.12
COMMD3-215ENST00000602574 CYP8B1Q9UNU6 501 aa8.03□□□□□ -1.12
COMMD3-215ENST00000602574 FRMPD3Q5JV73 1810 aa8.03□□□□□ -1.12
COMMD3-215ENST00000602574 TRBV5-3A0A0A0MS03 114 aa8.03□□□□□ -1.12
COMMD3-215ENST00000602574 A0A1B0GW64 132 aa8.03□□□□□ -1.12
COMMD3-215ENST00000602574 G3V4G9 280 aa8.03□□□□□ -1.12
COMMD3-215ENST00000602574 H3BN98 237 aa8.03□□□□□ -1.12
COMMD3-215ENST00000602574 GABARAPH6UMI1 98 aa8.03□□□□□ -1.12
COMMD3-215ENST00000602574 TLX2O43763 284 aaPredicted RBP8.03□□□□□ -1.12
COMMD3-215ENST00000602574 PGAM2P15259 253 aa8.03□□□□□ -1.12
COMMD3-215ENST00000602574 CXCR1P25024 350 aa8.03□□□□□ -1.12
COMMD3-215ENST00000602574 UCP1P25874 307 aa8.03□□□□□ -1.12
COMMD3-215ENST00000602574 ARL3P36405 182 aa8.03□□□□□ -1.12
COMMD3-215ENST00000602574 TFPI2P48307 235 aa8.03□□□□□ -1.12
COMMD3-215ENST00000602574 PNLIPRP1P54315 467 aa8.03□□□□□ -1.12
COMMD3-215ENST00000602574 ERVPABLB-1P60509 514 aa8.03□□□□□ -1.12
COMMD3-215ENST00000602574 UFM1P61960 85 aa8.03□□□□□ -1.12
COMMD3-215ENST00000602574 RPS13P62277 151 aaKnown RBP8.03□□□□□ -1.12
COMMD3-215ENST00000602574 JAG1P78504 1218 aa8.03□□□□□ -1.12
COMMD3-215ENST00000602574 AIMP2Q13155 320 aaKnown RBP8.03□□□□□ -1.12
COMMD3-215ENST00000602574 ZNF789Q5FWF6 425 aa8.03□□□□□ -1.12
COMMD3-215ENST00000602574 SLC25A30Q5SVS4 291 aa8.03□□□□□ -1.12
COMMD3-215ENST00000602574 DCAF15Q66K64 600 aa8.03□□□□□ -1.12
COMMD3-215ENST00000602574 PGBD2Q6P3X8 592 aa8.03□□□□□ -1.12
COMMD3-215ENST00000602574 TMEM220Q6QAJ8 160 aa8.03□□□□□ -1.12
COMMD3-215ENST00000602574 TEX43Q6ZNM6 134 aa8.03□□□□□ -1.12
COMMD3-215ENST00000602574 Q6ZVU0 165 aa8.03□□□□□ -1.12
COMMD3-215ENST00000602574 CTU1Q7Z7A3 348 aaKnown RBP8.03□□□□□ -1.12
COMMD3-215ENST00000602574 RBM45Q8IUH3 476 aaKnown RBP8.03□□□□□ -1.12
COMMD3-215ENST00000602574 SIDT2Q8NBJ9 832 aaKnown RBP8.03□□□□□ -1.12
COMMD3-215ENST00000602574 OR14K1Q8NGZ2 314 aa8.03□□□□□ -1.12
COMMD3-215ENST00000602574 RLN3Q8WXF3 142 aa8.03□□□□□ -1.12
COMMD3-215ENST00000602574 FRZBQ92765 325 aa8.03□□□□□ -1.12
COMMD3-215ENST00000602574 ZNF670Q9BS34 389 aa8.03□□□□□ -1.12
COMMD3-215ENST00000602574 ALG12Q9BV10 488 aa8.03□□□□□ -1.12
COMMD3-215ENST00000602574 MMP25Q9NPA2 562 aa8.03□□□□□ -1.12
COMMD3-215ENST00000602574 SEMA4BQ9NPR2 832 aaPredicted RBP8.03□□□□□ -1.12
COMMD3-215ENST00000602574 COPS7AQ9UBW8 275 aa8.03□□□□□ -1.12
COMMD3-215ENST00000602574 FTSJ1Q9UET6 329 aa8.03□□□□□ -1.12
COMMD3-215ENST00000602574 FBXO4Q9UKT5 387 aa8.03□□□□□ -1.12
COMMD3-215ENST00000602574 HIF3AQ9Y2N7 669 aa8.03□□□□□ -1.12
COMMD3-215ENST00000602574 ALPK3Q96L96 1907 aa8.02□□□□□ -1.13
COMMD3-215ENST00000602574 TRBV7-9A0A0J9YWB2 115 aa8.02□□□□□ -1.13
COMMD3-215ENST00000602574 A0A1B0GTI1 187 aa8.02□□□□□ -1.13
COMMD3-215ENST00000602574 RFXANKO14593 260 aa8.02□□□□□ -1.13
COMMD3-215ENST00000602574 TRGC2P03986 189 aa8.02□□□□□ -1.13
COMMD3-215ENST00000602574 CSF1P09603 554 aa8.02□□□□□ -1.13
COMMD3-215ENST00000602574 ARAFP10398 606 aa8.02□□□□□ -1.13
COMMD3-215ENST00000602574 ATF1P18846 271 aa8.02□□□□□ -1.13
COMMD3-215ENST00000602574 TNFSF4P23510 183 aa8.02□□□□□ -1.13
COMMD3-215ENST00000602574 SNCAP37840 140 aa8.02□□□□□ -1.13
COMMD3-215ENST00000602574 SLC6A8P48029 635 aa8.02□□□□□ -1.13
COMMD3-215ENST00000602574 UBE2KP61086 200 aa8.02□□□□□ -1.13
COMMD3-215ENST00000602574 HERV-K104P63124 156 aa8.02□□□□□ -1.13
COMMD3-215ENST00000602574 HYAL1Q12794 435 aa8.02□□□□□ -1.13
COMMD3-215ENST00000602574 TMEM164Q5U3C3 297 aa8.02□□□□□ -1.13
COMMD3-215ENST00000602574 DCAF12L2Q5VW00 463 aa8.02□□□□□ -1.13
COMMD3-215ENST00000602574 BRICD5Q6PL45 260 aa8.02□□□□□ -1.13
COMMD3-215ENST00000602574 NPNTQ6UXI9 565 aa8.02□□□□□ -1.13
COMMD3-215ENST00000602574 MARCH9Q86YJ5 346 aa8.02□□□□□ -1.13
COMMD3-215ENST00000602574 LINC00346Q8IVM7 164 aa8.02□□□□□ -1.13
COMMD3-215ENST00000602574 C20orf196Q8IYI0 205 aa8.02□□□□□ -1.13
COMMD3-215ENST00000602574 C1orf127Q8N9H9 656 aa8.02□□□□□ -1.13
COMMD3-215ENST00000602574 NOXO1Q8NFA2 376 aa8.02□□□□□ -1.13
COMMD3-215ENST00000602574 GPR150Q8NGU9 434 aa8.02□□□□□ -1.13
COMMD3-215ENST00000602574 PROKR1Q8TCW9 393 aa8.02□□□□□ -1.13
COMMD3-215ENST00000602574 NETO1Q8TDF5 533 aa8.02□□□□□ -1.13
COMMD3-215ENST00000602574 BRIX1Q8TDN6 353 aaKnown RBP8.02□□□□□ -1.13
COMMD3-215ENST00000602574 Q8WTZ3 238 aa8.02□□□□□ -1.13
COMMD3-215ENST00000602574 LRRN4Q8WUT4 740 aa8.02□□□□□ -1.13
COMMD3-215ENST00000602574 TMEM239Q8WW34 195 aa8.02□□□□□ -1.13
COMMD3-215ENST00000602574 EAF1Q96JC9 268 aaPredicted RBP8.02□□□□□ -1.13
COMMD3-215ENST00000602574 FCRL2Q96LA5 508 aaPredicted RBP8.02□□□□□ -1.13
COMMD3-215ENST00000602574 PRRC1Q96M27 445 aa8.02□□□□□ -1.13
COMMD3-215ENST00000602574 RAB1BQ9H0U4 201 aa8.02□□□□□ -1.13
COMMD3-215ENST00000602574 CDH20Q9HBT6 801 aa8.02□□□□□ -1.13
COMMD3-215ENST00000602574 SIRT3Q9NTG7 399 aaPredicted RBP8.02□□□□□ -1.13
COMMD3-215ENST00000602574 OR6C3Q9NZP0 311 aa8.02□□□□□ -1.13
COMMD3-215ENST00000602574 C5AR2Q9P296 337 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms