RNA–Protein interactions for RNA: ENST00000601919.5

SSBP4-212, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-212ENST00000601919 OR2G6Q5TZ20 316 aa16.3■□□□□ 0.2
SSBP4-212ENST00000601919 OTPQ5XKR4 325 aa16.3■□□□□ 0.2
SSBP4-212ENST00000601919 SSX6Q7RTT6 188 aa16.3■□□□□ 0.2
SSBP4-212ENST00000601919 KRT77Q7Z794 578 aa16.3■□□□□ 0.2
SSBP4-212ENST00000601919 HIST2H2ABQ8IUE6 130 aaPredicted RBP16.3■□□□□ 0.2
SSBP4-212ENST00000601919 ZNF679Q8IYX0 411 aa16.3■□□□□ 0.2
SSBP4-212ENST00000601919 ST7LQ8TDW4 575 aa16.3■□□□□ 0.2
SSBP4-212ENST00000601919 SPRYD4Q8WW59 207 aaPredicted RBP16.3■□□□□ 0.2
SSBP4-212ENST00000601919 MUL1Q969V5 352 aa16.3■□□□□ 0.2
SSBP4-212ENST00000601919 C4orf36Q96KX1 117 aa16.3■□□□□ 0.2
SSBP4-212ENST00000601919 COG8Q96MW5 612 aa16.3■□□□□ 0.2
SSBP4-212ENST00000601919 OR8B4Q96RC9 309 aa16.3■□□□□ 0.2
SSBP4-212ENST00000601919 SH3GL3Q99963 347 aa16.3■□□□□ 0.2
SSBP4-212ENST00000601919 ISYNA1Q9NPH2 558 aa16.3■□□□□ 0.2
SSBP4-212ENST00000601919 TRIM36Q9NQ86 728 aa16.3■□□□□ 0.2
SSBP4-212ENST00000601919 GNG8Q9UK08 70 aa16.3■□□□□ 0.2
SSBP4-212ENST00000601919 KLHDC2Q9Y2U9 406 aa16.3■□□□□ 0.2
SSBP4-212ENST00000601919 LSM2Q9Y333 95 aaKnown RBP16.3■□□□□ 0.2
SSBP4-212ENST00000601919 TIMM10BQ9Y5J6 103 aa16.3■□□□□ 0.2
SSBP4-212ENST00000601919 NCOA6Q14686 2063 aaPredicted RBP16.3■□□□□ 0.2
SSBP4-212ENST00000601919 ZNF878C9JN71 531 aa16.29■□□□□ 0.2
SSBP4-212ENST00000601919 LCKP06239 509 aa16.29■□□□□ 0.2
SSBP4-212ENST00000601919 HSMCR30P0CW71 290 aa16.29■□□□□ 0.2
SSBP4-212ENST00000601919 PSKH1P11801 424 aa16.29■□□□□ 0.2
SSBP4-212ENST00000601919 PSMB9P28065 219 aa16.29■□□□□ 0.2
SSBP4-212ENST00000601919 HOXC12P31275 282 aa16.29■□□□□ 0.2
SSBP4-212ENST00000601919 TTKP33981 857 aa16.29■□□□□ 0.2
SSBP4-212ENST00000601919 GBX2P52951 348 aaPredicted RBP16.29■□□□□ 0.2
SSBP4-212ENST00000601919 TAS2R43P59537 309 aa16.29■□□□□ 0.2
SSBP4-212ENST00000601919 BDH1Q02338 343 aa16.29■□□□□ 0.2
SSBP4-212ENST00000601919 TAF13Q15543 124 aa16.29■□□□□ 0.2
SSBP4-212ENST00000601919 TIGD6Q17RP2 521 aa16.29■□□□□ 0.2
SSBP4-212ENST00000601919 SYT6Q5T7P8 510 aaPredicted RBP16.29■□□□□ 0.2
SSBP4-212ENST00000601919 TMEM53Q6P2H8 277 aa16.29■□□□□ 0.2
SSBP4-212ENST00000601919 CORO6Q6QEF8 472 aa16.29■□□□□ 0.2
SSBP4-212ENST00000601919 SKA3Q8IX90 412 aa16.29■□□□□ 0.2
SSBP4-212ENST00000601919 ZNF433Q8N7K0 673 aaPredicted RBP16.29■□□□□ 0.2
SSBP4-212ENST00000601919 YIPF7Q8N8F6 280 aa16.29■□□□□ 0.2
SSBP4-212ENST00000601919 RNF133Q8WVZ7 376 aa16.29■□□□□ 0.2
SSBP4-212ENST00000601919 GATAD2BQ8WXI9 593 aa16.29■□□□□ 0.2
SSBP4-212ENST00000601919 HTRA1Q92743 480 aa16.29■□□□□ 0.2
SSBP4-212ENST00000601919 BCL2L2Q92843 193 aaPredicted RBP16.29■□□□□ 0.2
SSBP4-212ENST00000601919 SLAMF6Q96DU3 332 aa16.29■□□□□ 0.2
SSBP4-212ENST00000601919 BOD1Q96IK1 185 aa16.29■□□□□ 0.2
SSBP4-212ENST00000601919 MGLLQ99685 303 aa16.29■□□□□ 0.2
SSBP4-212ENST00000601919 HDHD5Q9BXW7 423 aa16.29■□□□□ 0.2
SSBP4-212ENST00000601919 BABAM2Q9NXR7 383 aa16.29■□□□□ 0.2
SSBP4-212ENST00000601919 COQ3Q9NZJ6 369 aa16.29■□□□□ 0.2
SSBP4-212ENST00000601919 NBEAQ8NFP9 2946 aa16.29■□□□□ 0.2
SSBP4-212ENST00000601919 A0A096LPE4 126 aa16.28■□□□□ 0.2
SSBP4-212ENST00000601919 A0A1W2PPZ6 126 aa16.28■□□□□ 0.2
SSBP4-212ENST00000601919 EEF1E1-BLOC1S5C9J1V9 151 aa16.28■□□□□ 0.2
SSBP4-212ENST00000601919 EEF1E1O43324 174 aaKnown RBP16.28■□□□□ 0.2
SSBP4-212ENST00000601919 INMTO95050 263 aa16.28■□□□□ 0.2
SSBP4-212ENST00000601919 UBL3O95164 117 aa16.28■□□□□ 0.2
SSBP4-212ENST00000601919 H2BFMP0C1H6 154 aa16.28■□□□□ 0.2
SSBP4-212ENST00000601919 ARR3P36575 388 aa16.28■□□□□ 0.2
SSBP4-212ENST00000601919 ALDH3B2P48448 385 aa16.28■□□□□ 0.2
SSBP4-212ENST00000601919 RIDAP52758 137 aaKnown RBP16.28■□□□□ 0.2
SSBP4-212ENST00000601919 FOXG1P55316 489 aaPredicted RBP16.28■□□□□ 0.2
SSBP4-212ENST00000601919 OR12D2P58182 307 aa16.28■□□□□ 0.2
SSBP4-212ENST00000601919 UBE2NP61088 152 aaKnown RBP16.28■□□□□ 0.2
SSBP4-212ENST00000601919 ACSM1Q08AH1 577 aa16.28■□□□□ 0.2
SSBP4-212ENST00000601919 ECH1Q13011 328 aa16.28■□□□□ 0.2
SSBP4-212ENST00000601919 MLLT11Q13015 90 aaPredicted RBP16.28■□□□□ 0.2
SSBP4-212ENST00000601919 TP53I3Q53FA7 332 aa16.28■□□□□ 0.2
SSBP4-212ENST00000601919 ZNF684Q5T5D7 378 aa16.28■□□□□ 0.2
SSBP4-212ENST00000601919 ZNF544Q6NX49 715 aa16.28■□□□□ 0.2
SSBP4-212ENST00000601919 CFAP77Q6ZQR2 320 aa16.28■□□□□ 0.2
SSBP4-212ENST00000601919 VASH1Q7L8A9 365 aaPredicted RBP16.28■□□□□ 0.2
SSBP4-212ENST00000601919 GPR141Q7Z602 305 aa16.28■□□□□ 0.2
SSBP4-212ENST00000601919 CXorf67Q86X51 503 aaPredicted RBP16.28■□□□□ 0.2
SSBP4-212ENST00000601919 C17orf78Q8N4C9 275 aa16.28■□□□□ 0.2
SSBP4-212ENST00000601919 RFLNBQ8N5W9 214 aa16.28■□□□□ 0.2
SSBP4-212ENST00000601919 ASB5Q8WWX0 329 aa16.28■□□□□ 0.2
SSBP4-212ENST00000601919 FBXO17Q96EF6 278 aa16.28■□□□□ 0.2
SSBP4-212ENST00000601919 MAP6Q96JE9 813 aa16.28■□□□□ 0.2
SSBP4-212ENST00000601919 OR5M11Q96RB7 305 aa16.28■□□□□ 0.2
SSBP4-212ENST00000601919 TTTY10Q9BZA0 68 aa16.28■□□□□ 0.2
SSBP4-212ENST00000601919 HDHD2Q9H0R4 259 aa16.28■□□□□ 0.2
SSBP4-212ENST00000601919 NIPAL2Q9H841 368 aa16.28■□□□□ 0.2
SSBP4-212ENST00000601919 RNF121Q9H920 327 aa16.28■□□□□ 0.2
SSBP4-212ENST00000601919 CENPMQ9NSP4 180 aa16.28■□□□□ 0.2
SSBP4-212ENST00000601919 ELOVL5Q9NYP7 299 aa16.28■□□□□ 0.2
SSBP4-212ENST00000601919 CACNA1CQ13936 2221 aa16.28■□□□□ 0.2
SSBP4-212ENST00000601919 A8MXE2 369 aa16.27■□□□□ 0.2
SSBP4-212ENST00000601919 RER1O15258 196 aa16.27■□□□□ 0.2
SSBP4-212ENST00000601919 LYZL6O75951 148 aa16.27■□□□□ 0.2
SSBP4-212ENST00000601919 CHRNB4P30926 498 aa16.27■□□□□ 0.2
SSBP4-212ENST00000601919 GRB2P62993 217 aaKnown RBP16.27■□□□□ 0.2
SSBP4-212ENST00000601919 HIST1H3AP68431 136 aa16.27■□□□□ 0.2
SSBP4-212ENST00000601919 RAB35Q15286 201 aa16.27■□□□□ 0.2
SSBP4-212ENST00000601919 TBRG1Q3YBR2 411 aa16.27■□□□□ 0.2
SSBP4-212ENST00000601919 CCDC58Q4VC31 144 aa16.27■□□□□ 0.2
SSBP4-212ENST00000601919 ELFN2Q5R3F8 820 aa16.27■□□□□ 0.2
SSBP4-212ENST00000601919 SFRP5Q5T4F7 317 aa16.27■□□□□ 0.2
SSBP4-212ENST00000601919 C1QTNF12Q5T7M4 302 aa16.27■□□□□ 0.2
SSBP4-212ENST00000601919 HIST2H3PS2Q5TEC6 136 aa16.27■□□□□ 0.2
SSBP4-212ENST00000601919 LRRN1Q6UXK5 716 aa16.27■□□□□ 0.2
SSBP4-212ENST00000601919 HIST2H3AQ71DI3 136 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms