RNA–Protein interactions for RNA: ENST00000597995.1

TRIM28-212, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 702 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-212ENST00000597995 POM121L2Q96KW2 1035 aa10.6□□□□□ -0.71
TRIM28-212ENST00000597995 C7orf34Q96L11 122 aa10.6□□□□□ -0.71
TRIM28-212ENST00000597995 DIRC2Q96SL1 478 aa10.6□□□□□ -0.71
TRIM28-212ENST00000597995 EGLN1Q9GZT9 426 aa10.6□□□□□ -0.71
TRIM28-212ENST00000597995 NMNAT1Q9HAN9 279 aaPredicted RBP10.6□□□□□ -0.71
TRIM28-212ENST00000597995 SMURF2Q9HAU4 748 aa10.6□□□□□ -0.71
TRIM28-212ENST00000597995 CCNB1IP1Q9NPC3 277 aa10.6□□□□□ -0.71
TRIM28-212ENST00000597995 DCAF13Q9NV06 445 aaKnown RBP10.6□□□□□ -0.71
TRIM28-212ENST00000597995 NDUFAF4Q9P032 175 aa10.6□□□□□ -0.71
TRIM28-212ENST00000597995 STX18Q9P2W9 335 aaKnown RBP10.6□□□□□ -0.71
TRIM28-212ENST00000597995 ZDHHC8Q9ULC8 765 aa10.6□□□□□ -0.71
TRIM28-212ENST00000597995 ENPP4Q9Y6X5 453 aa10.6□□□□□ -0.71
TRIM28-212ENST00000597995 PKD1L1Q8TDX9 2849 aa10.6□□□□□ -0.71
TRIM28-212ENST00000597995 H3BSA7 217 aa10.59□□□□□ -0.71
TRIM28-212ENST00000597995 NDUFAB1O14561 156 aa10.59□□□□□ -0.71
TRIM28-212ENST00000597995 SPRY3O43610 288 aa10.59□□□□□ -0.71
TRIM28-212ENST00000597995 CCNOP22674 350 aa10.59□□□□□ -0.71
TRIM28-212ENST00000597995 GPR4P46093 362 aa10.59□□□□□ -0.71
TRIM28-212ENST00000597995 LCN2P80188 198 aa10.59□□□□□ -0.71
TRIM28-212ENST00000597995 THEM4Q5T1C6 240 aa10.59□□□□□ -0.71
TRIM28-212ENST00000597995 ZNF730Q6ZMV8 503 aa10.59□□□□□ -0.71
TRIM28-212ENST00000597995 TMPRSS11FQ6ZWK6 438 aa10.59□□□□□ -0.71
TRIM28-212ENST00000597995 DOK3Q7L591 496 aa10.59□□□□□ -0.71
TRIM28-212ENST00000597995 CPLX4Q7Z7G2 160 aa10.59□□□□□ -0.71
TRIM28-212ENST00000597995 ZNF101Q8IZC7 436 aa10.59□□□□□ -0.71
TRIM28-212ENST00000597995 LRRC18Q8N456 261 aa10.59□□□□□ -0.71
TRIM28-212ENST00000597995 SLC7A13Q8TCU3 470 aa10.59□□□□□ -0.71
TRIM28-212ENST00000597995 ST7LQ8TDW4 575 aa10.59□□□□□ -0.71
TRIM28-212ENST00000597995 NSMAFQ92636 917 aa10.59□□□□□ -0.71
TRIM28-212ENST00000597995 POP5Q969H6 163 aaKnown RBP10.59□□□□□ -0.71
TRIM28-212ENST00000597995 GPA33Q99795 319 aa10.59□□□□□ -0.71
TRIM28-212ENST00000597995 ZMAT3Q9HA38 289 aaKnown RBP10.59□□□□□ -0.71
TRIM28-212ENST00000597995 SPAG4Q9NPE6 437 aa10.59□□□□□ -0.71
TRIM28-212ENST00000597995 ARL8BQ9NVJ2 186 aa10.59□□□□□ -0.71
TRIM28-212ENST00000597995 KLHL21Q9UJP4 597 aa10.59□□□□□ -0.71
TRIM28-212ENST00000597995 POLR3KQ9Y2Y1 108 aaPredicted RBP10.59□□□□□ -0.71
TRIM28-212ENST00000597995 PCDHGB1Q9Y5G3 927 aa10.59□□□□□ -0.71
TRIM28-212ENST00000597995 EFCAB9A8MZ26 197 aa10.58□□□□□ -0.72
TRIM28-212ENST00000597995 ICMTO60725 284 aa10.58□□□□□ -0.72
TRIM28-212ENST00000597995 DIRAS1O95057 198 aa10.58□□□□□ -0.72
TRIM28-212ENST00000597995 SEMG1P04279 462 aa10.58□□□□□ -0.72
TRIM28-212ENST00000597995 SCG5P05408 212 aa10.58□□□□□ -0.72
TRIM28-212ENST00000597995 CD55P08174 381 aa10.58□□□□□ -0.72
TRIM28-212ENST00000597995 ZNF32P17041 273 aa10.58□□□□□ -0.72
TRIM28-212ENST00000597995 PRTN3P24158 256 aa10.58□□□□□ -0.72
TRIM28-212ENST00000597995 IFNA8P32881 189 aa10.58□□□□□ -0.72
TRIM28-212ENST00000597995 MSX2P35548 267 aaPredicted RBP10.58□□□□□ -0.72
TRIM28-212ENST00000597995 MPV17P39210 176 aa10.58□□□□□ -0.72
TRIM28-212ENST00000597995 WNT5AP41221 380 aa10.58□□□□□ -0.72
TRIM28-212ENST00000597995 GDI2P50395 445 aaKnown RBP10.58□□□□□ -0.72
TRIM28-212ENST00000597995 ERVK-25P63136 954 aa10.58□□□□□ -0.72
TRIM28-212ENST00000597995 GNGT1P63211 74 aa10.58□□□□□ -0.72
TRIM28-212ENST00000597995 CD47Q08722 323 aa10.58□□□□□ -0.72
TRIM28-212ENST00000597995 SEC23BQ15437 767 aa10.58□□□□□ -0.72
TRIM28-212ENST00000597995 TAF11Q15544 211 aa10.58□□□□□ -0.72
TRIM28-212ENST00000597995 ZMAT1Q5H9K5 638 aa10.58□□□□□ -0.72
TRIM28-212ENST00000597995 FAM27BQ5VT28 67 aa10.58□□□□□ -0.72
TRIM28-212ENST00000597995 OAFQ86UD1 273 aa10.58□□□□□ -0.72
TRIM28-212ENST00000597995 SLC25A40Q8TBP6 338 aa10.58□□□□□ -0.72
TRIM28-212ENST00000597995 KLF14Q8TD94 323 aaPredicted RBP10.58□□□□□ -0.72
TRIM28-212ENST00000597995 IPCEF1Q8WWN9 437 aaPredicted RBP10.58□□□□□ -0.72
TRIM28-212ENST00000597995 C22orf15Q8WYQ4 148 aa10.58□□□□□ -0.72
TRIM28-212ENST00000597995 FUZQ9BT04 418 aa10.58□□□□□ -0.72
TRIM28-212ENST00000597995 ALG12Q9BV10 488 aa10.58□□□□□ -0.72
TRIM28-212ENST00000597995 ADA2Q9NZK5 511 aa10.58□□□□□ -0.72
TRIM28-212ENST00000597995 CD300AQ9UGN4 299 aa10.58□□□□□ -0.72
TRIM28-212ENST00000597995 NUP50Q9UKX7 468 aa10.58□□□□□ -0.72
TRIM28-212ENST00000597995 ADAM18Q9Y3Q7 739 aa10.58□□□□□ -0.72
TRIM28-212ENST00000597995 PPIAL4AQ9Y536 164 aa10.58□□□□□ -0.72
TRIM28-212ENST00000597995 NPTNQ9Y639 398 aa10.58□□□□□ -0.72
TRIM28-212ENST00000597995 LOC100509620A0A075B734 347 aa10.57□□□□□ -0.72
TRIM28-212ENST00000597995 TRBV4-1A0A0J9YWV2 114 aa10.57□□□□□ -0.72
TRIM28-212ENST00000597995 A0A1W2PRQ8 180 aa10.57□□□□□ -0.72
TRIM28-212ENST00000597995 ISPDA4D126 451 aa10.57□□□□□ -0.72
TRIM28-212ENST00000597995 C5orf49A4QMS7 147 aa10.57□□□□□ -0.72
TRIM28-212ENST00000597995 ZSCAN5BA6NJL1 495 aa10.57□□□□□ -0.72
TRIM28-212ENST00000597995 H7C1C5 153 aa10.57□□□□□ -0.72
TRIM28-212ENST00000597995 IMPA2O14732 288 aa10.57□□□□□ -0.72
TRIM28-212ENST00000597995 PTP4A3O75365 173 aa10.57□□□□□ -0.72
TRIM28-212ENST00000597995 H1F0P07305 194 aaKnown RBP10.57□□□□□ -0.72
TRIM28-212ENST00000597995 NR2C1P13056 603 aa10.57□□□□□ -0.72
TRIM28-212ENST00000597995 ZFP36P26651 326 aaKnown RBP10.57□□□□□ -0.72
TRIM28-212ENST00000597995 OMPP47874 163 aa10.57□□□□□ -0.72
TRIM28-212ENST00000597995 SLC9A3P48764 834 aa10.57□□□□□ -0.72
TRIM28-212ENST00000597995 FXYD6P3P58550 94 aa10.57□□□□□ -0.72
TRIM28-212ENST00000597995 LCN6P62502 163 aa10.57□□□□□ -0.72
TRIM28-212ENST00000597995 PSG4Q00888 419 aa10.57□□□□□ -0.72
TRIM28-212ENST00000597995 DGCR6Q14129 220 aa10.57□□□□□ -0.72
TRIM28-212ENST00000597995 SGCAQ16586 387 aa10.57□□□□□ -0.72
TRIM28-212ENST00000597995 ZBED5Q49AG3 693 aa10.57□□□□□ -0.72
TRIM28-212ENST00000597995 TMEM255AQ5JRV8 349 aa10.57□□□□□ -0.72
TRIM28-212ENST00000597995 SPATA46Q5T0L3 261 aa10.57□□□□□ -0.72
TRIM28-212ENST00000597995 FOXL2NBQ6ZUU3 175 aa10.57□□□□□ -0.72
TRIM28-212ENST00000597995 FAM122BQ7Z309 247 aa10.57□□□□□ -0.72
TRIM28-212ENST00000597995 ALDH16A1Q8IZ83 802 aa10.57□□□□□ -0.72
TRIM28-212ENST00000597995 SIGLECL1Q8N7X8 197 aa10.57□□□□□ -0.72
TRIM28-212ENST00000597995 DEFB108BQ8NET1 73 aa10.57□□□□□ -0.72
TRIM28-212ENST00000597995 FAM46AQ96IP4 442 aaKnown RBP10.57□□□□□ -0.72
TRIM28-212ENST00000597995 DHRS1Q96LJ7 313 aa10.57□□□□□ -0.72
TRIM28-212ENST00000597995 Q96M85 177 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms