RNA–Protein interactions for RNA: ENST00000593706.3

PNKP-202, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 849 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-202ENST00000593706 STX18Q9P2W9 335 aaKnown RBP12.5□□□□□ -0.41
PNKP-202ENST00000593706 TAGLN3Q9UI15 199 aa12.5□□□□□ -0.41
PNKP-202ENST00000593706 IGKV1D-43A0A0B4J1Z2 117 aa12.49□□□□□ -0.41
PNKP-202ENST00000593706 A0A1W2PRQ8 180 aa12.49□□□□□ -0.41
PNKP-202ENST00000593706 MGRN1O60291 552 aa12.49□□□□□ -0.41
PNKP-202ENST00000593706 NR2C1P13056 603 aa12.49□□□□□ -0.41
PNKP-202ENST00000593706 MPV17P39210 176 aa12.49□□□□□ -0.41
PNKP-202ENST00000593706 WNT5AP41221 380 aa12.49□□□□□ -0.41
PNKP-202ENST00000593706 ERVK-25P63136 954 aa12.49□□□□□ -0.41
PNKP-202ENST00000593706 MRPS34P82930 218 aaKnown RBP12.49□□□□□ -0.41
PNKP-202ENST00000593706 DGCR6Q14129 220 aa12.49□□□□□ -0.41
PNKP-202ENST00000593706 SGCAQ16586 387 aa12.49□□□□□ -0.41
PNKP-202ENST00000593706 ALG10Q5BKT4 473 aa12.49□□□□□ -0.41
PNKP-202ENST00000593706 ZMAT1Q5H9K5 638 aa12.49□□□□□ -0.41
PNKP-202ENST00000593706 ARMCX4Q5H9R4 360 aa12.49□□□□□ -0.41
PNKP-202ENST00000593706 THEM4Q5T1C6 240 aa12.49□□□□□ -0.41
PNKP-202ENST00000593706 TBPL2Q6SJ96 375 aa12.49□□□□□ -0.41
PNKP-202ENST00000593706 RFPL4BQ6ZWI9 263 aa12.49□□□□□ -0.41
PNKP-202ENST00000593706 TMPRSS11FQ6ZWK6 438 aa12.49□□□□□ -0.41
PNKP-202ENST00000593706 FKBP9P1Q75LS8 142 aa12.49□□□□□ -0.41
PNKP-202ENST00000593706 RNF113BQ8IZP6 322 aaKnown RBP12.49□□□□□ -0.41
PNKP-202ENST00000593706 ZDHHC22Q8N966 263 aa12.49□□□□□ -0.41
PNKP-202ENST00000593706 OR13C2Q8NGS9 318 aa12.49□□□□□ -0.41
PNKP-202ENST00000593706 AKR7LQ8NHP1 331 aa12.49□□□□□ -0.41
PNKP-202ENST00000593706 ABHD4Q8TB40 342 aa12.49□□□□□ -0.41
PNKP-202ENST00000593706 SLC25A40Q8TBP6 338 aa12.49□□□□□ -0.41
PNKP-202ENST00000593706 SMURF2Q9HAU4 748 aa12.49□□□□□ -0.41
PNKP-202ENST00000593706 CYSLTR2Q9NS75 346 aa12.49□□□□□ -0.41
PNKP-202ENST00000593706 CGGBP1Q9UFW8 167 aaPredicted RBP12.49□□□□□ -0.41
PNKP-202ENST00000593706 RPS6KA6Q9UK32 745 aa12.49□□□□□ -0.41
PNKP-202ENST00000593706 PCDHGB1Q9Y5G3 927 aa12.49□□□□□ -0.41
PNKP-202ENST00000593706 TRAV27A0A087WT01 109 aa12.48□□□□□ -0.41
PNKP-202ENST00000593706 ZSCAN5BA6NJL1 495 aa12.48□□□□□ -0.41
PNKP-202ENST00000593706 DCTN3O75935 186 aa12.48□□□□□ -0.41
PNKP-202ENST00000593706 UBOX5O94941 541 aa12.48□□□□□ -0.41
PNKP-202ENST00000593706 IFNA8P32881 189 aa12.48□□□□□ -0.41
PNKP-202ENST00000593706 MMP15P51511 669 aa12.48□□□□□ -0.41
PNKP-202ENST00000593706 FMODQ06828 376 aa12.48□□□□□ -0.41
PNKP-202ENST00000593706 TOP3AQ13472 1001 aaPredicted RBP12.48□□□□□ -0.41
PNKP-202ENST00000593706 TAF11Q15544 211 aa12.48□□□□□ -0.41
PNKP-202ENST00000593706 ANKDD1AQ495B1 522 aa12.48□□□□□ -0.41
PNKP-202ENST00000593706 GLYATQ6IB77 296 aa12.48□□□□□ -0.41
PNKP-202ENST00000593706 KLF14Q8TD94 323 aaPredicted RBP12.48□□□□□ -0.41
PNKP-202ENST00000593706 NSMAFQ92636 917 aa12.48□□□□□ -0.41
PNKP-202ENST00000593706 NABP1Q96AH0 204 aa12.48□□□□□ -0.41
PNKP-202ENST00000593706 MARS2Q96GW9 593 aaKnown RBP12.48□□□□□ -0.41
PNKP-202ENST00000593706 OR2J1Q9GZK6 312 aa12.48□□□□□ -0.41
PNKP-202ENST00000593706 ADA2Q9NZK5 511 aa12.48□□□□□ -0.41
PNKP-202ENST00000593706 OPN4Q9UHM6 478 aa12.48□□□□□ -0.41
PNKP-202ENST00000593706 ZDHHC8Q9ULC8 765 aa12.48□□□□□ -0.41
PNKP-202ENST00000593706 SAMD4AQ9UPU9 718 aaKnown RBP12.48□□□□□ -0.41
PNKP-202ENST00000593706 LOC100509620A0A075B734 347 aa12.47□□□□□ -0.41
PNKP-202ENST00000593706 EFCAB9A8MZ26 197 aa12.47□□□□□ -0.41
PNKP-202ENST00000593706 ARPC2O15144 300 aa12.47□□□□□ -0.41
PNKP-202ENST00000593706 FOXH1O75593 365 aa12.47□□□□□ -0.41
PNKP-202ENST00000593706 FSHBP01225 129 aa12.47□□□□□ -0.41
PNKP-202ENST00000593706 RHCEP18577 417 aa12.47□□□□□ -0.41
PNKP-202ENST00000593706 LIPAP38571 399 aa12.47□□□□□ -0.41
PNKP-202ENST00000593706 GPR4P46093 362 aa12.47□□□□□ -0.41
PNKP-202ENST00000593706 SLC9A3P48764 834 aa12.47□□□□□ -0.41
PNKP-202ENST00000593706 RPL27P61353 136 aaKnown RBP12.47□□□□□ -0.41
PNKP-202ENST00000593706 PPP1CBP62140 327 aa12.47□□□□□ -0.41
PNKP-202ENST00000593706 FOXL1Q12952 345 aa12.47□□□□□ -0.41
PNKP-202ENST00000593706 KRT72Q14CN4 511 aa12.47□□□□□ -0.41
PNKP-202ENST00000593706 SEC23BQ15437 767 aa12.47□□□□□ -0.41
PNKP-202ENST00000593706 TMEM255AQ5JRV8 349 aa12.47□□□□□ -0.41
PNKP-202ENST00000593706 MBNL2Q5VZF2 373 aaKnown RBP12.47□□□□□ -0.41
PNKP-202ENST00000593706 ZNF730Q6ZMV8 503 aa12.47□□□□□ -0.41
PNKP-202ENST00000593706 IGFN1Q86VF2 1251 aa12.47□□□□□ -0.41
PNKP-202ENST00000593706 ALDH16A1Q8IZ83 802 aa12.47□□□□□ -0.41
PNKP-202ENST00000593706 FITM2Q8N6M3 262 aa12.47□□□□□ -0.41
PNKP-202ENST00000593706 CLDN22Q8N7P3 220 aa12.47□□□□□ -0.41
PNKP-202ENST00000593706 SIGLECL1Q8N7X8 197 aa12.47□□□□□ -0.41
PNKP-202ENST00000593706 OR51A7Q8NH64 312 aa12.47□□□□□ -0.41
PNKP-202ENST00000593706 POM121L2Q96KW2 1035 aa12.47□□□□□ -0.41
PNKP-202ENST00000593706 DIRC2Q96SL1 478 aa12.47□□□□□ -0.41
PNKP-202ENST00000593706 ALG12Q9BV10 488 aa12.47□□□□□ -0.41
PNKP-202ENST00000593706 FAM53CQ9NYF3 392 aa12.47□□□□□ -0.41
PNKP-202ENST00000593706 MAGEL2Q9UJ55 1249 aa12.47□□□□□ -0.41
PNKP-202ENST00000593706 TRBV4-1A0A0J9YWV2 114 aa12.46□□□□□ -0.41
PNKP-202ENST00000593706 H3BSA7 217 aa12.46□□□□□ -0.41
PNKP-202ENST00000593706 KCNAB3O43448 404 aa12.46□□□□□ -0.41
PNKP-202ENST00000593706 TIMM8AO60220 97 aaPredicted RBP12.46□□□□□ -0.41
PNKP-202ENST00000593706 H1F0P07305 194 aaKnown RBP12.46□□□□□ -0.41
PNKP-202ENST00000593706 GUCA1AP43080 201 aaPredicted RBP12.46□□□□□ -0.41
PNKP-202ENST00000593706 OMPP47874 163 aa12.46□□□□□ -0.41
PNKP-202ENST00000593706 ARHGDIAP52565 204 aa12.46□□□□□ -0.41
PNKP-202ENST00000593706 FXYD6P3P58550 94 aa12.46□□□□□ -0.41
PNKP-202ENST00000593706 TNFAIP6P98066 277 aaPredicted RBP12.46□□□□□ -0.41
PNKP-202ENST00000593706 PSG4Q00888 419 aa12.46□□□□□ -0.41
PNKP-202ENST00000593706 SPATS1Q496A3 300 aa12.46□□□□□ -0.41
PNKP-202ENST00000593706 SAMD4BQ5PRF9 694 aaKnown RBP12.46□□□□□ -0.41
PNKP-202ENST00000593706 FAM205BPQ63HN1 556 aa12.46□□□□□ -0.41
PNKP-202ENST00000593706 SLC25A47Q6Q0C1 308 aa12.46□□□□□ -0.41
PNKP-202ENST00000593706 FOXL2NBQ6ZUU3 175 aa12.46□□□□□ -0.41
PNKP-202ENST00000593706 FAM122BQ7Z309 247 aa12.46□□□□□ -0.41
PNKP-202ENST00000593706 OAFQ86UD1 273 aa12.46□□□□□ -0.41
PNKP-202ENST00000593706 CYP4Z1Q86W10 505 aa12.46□□□□□ -0.41
PNKP-202ENST00000593706 C1orf174Q8IYL3 243 aa12.46□□□□□ -0.41
PNKP-202ENST00000593706 KLHL36Q8N4N3 616 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms