RNA–Protein interactions for RNA: ENST00000591519.1

VPS4B-207, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 2 BASIC

Gene VPS4B, Length 551 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-207ENST00000591519 LOC100509620A0A075B734 347 aa8.84□□□□□ -0.99
VPS4B-207ENST00000591519 IGKV1D-43A0A0B4J1Z2 117 aa8.84□□□□□ -0.99
VPS4B-207ENST00000591519 MCIDASD6RGH6 385 aa8.84□□□□□ -0.99
VPS4B-207ENST00000591519 GYG2O15488 501 aa8.84□□□□□ -0.99
VPS4B-207ENST00000591519 CDC14BO60729 498 aa8.84□□□□□ -0.99
VPS4B-207ENST00000591519 H1F0P07305 194 aaKnown RBP8.84□□□□□ -0.99
VPS4B-207ENST00000591519 NR2C1P13056 603 aa8.84□□□□□ -0.99
VPS4B-207ENST00000591519 CDAP32320 146 aa8.84□□□□□ -0.99
VPS4B-207ENST00000591519 APLNRP35414 380 aa8.84□□□□□ -0.99
VPS4B-207ENST00000591519 LIPAP38571 399 aa8.84□□□□□ -0.99
VPS4B-207ENST00000591519 COMPP49747 757 aaPredicted RBP8.84□□□□□ -0.99
VPS4B-207ENST00000591519 ERFP50548 548 aa8.84□□□□□ -0.99
VPS4B-207ENST00000591519 PSG4Q00888 419 aa8.84□□□□□ -0.99
VPS4B-207ENST00000591519 MS4A2Q01362 244 aa8.84□□□□□ -0.99
VPS4B-207ENST00000591519 SPIBQ01892 262 aa8.84□□□□□ -0.99
VPS4B-207ENST00000591519 ALKBH6Q3KRA9 238 aa8.84□□□□□ -0.99
VPS4B-207ENST00000591519 ZNF718Q3SXZ3 478 aa8.84□□□□□ -0.99
VPS4B-207ENST00000591519 THEM4Q5T1C6 240 aa8.84□□□□□ -0.99
VPS4B-207ENST00000591519 MBNL2Q5VZF2 373 aaKnown RBP8.84□□□□□ -0.99
VPS4B-207ENST00000591519 FAHD2BQ6P2I3 314 aaPredicted RBP8.84□□□□□ -0.99
VPS4B-207ENST00000591519 FOXL2NBQ6ZUU3 175 aa8.84□□□□□ -0.99
VPS4B-207ENST00000591519 NRMQ8IXM6 262 aa8.84□□□□□ -0.99
VPS4B-207ENST00000591519 OFCC1Q8IZS5 231 aa8.84□□□□□ -0.99
VPS4B-207ENST00000591519 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.84□□□□□ -0.99
VPS4B-207ENST00000591519 MOSPD2Q8NHP6 518 aa8.84□□□□□ -0.99
VPS4B-207ENST00000591519 HDAC2Q92769 488 aaKnown RBP8.84□□□□□ -0.99
VPS4B-207ENST00000591519 MCUR1Q96AQ8 359 aa8.84□□□□□ -0.99
VPS4B-207ENST00000591519 FAHD2AQ96GK7 314 aa8.84□□□□□ -0.99
VPS4B-207ENST00000591519 ALG12Q9BV10 488 aa8.84□□□□□ -0.99
VPS4B-207ENST00000591519 NARFLQ9H6Q4 476 aa8.84□□□□□ -0.99
VPS4B-207ENST00000591519 ZNF665Q9H7R5 613 aa8.84□□□□□ -0.99
VPS4B-207ENST00000591519 NMNAT1Q9HAN9 279 aaPredicted RBP8.84□□□□□ -0.99
VPS4B-207ENST00000591519 CCNB1IP1Q9NPC3 277 aa8.84□□□□□ -0.99
VPS4B-207ENST00000591519 DECR2Q9NUI1 292 aa8.84□□□□□ -0.99
VPS4B-207ENST00000591519 NDUFAF4Q9P032 175 aa8.84□□□□□ -0.99
VPS4B-207ENST00000591519 EIF3KQ9UBQ5 218 aaKnown RBP8.84□□□□□ -0.99
VPS4B-207ENST00000591519 ANK2Q01484 3957 aa8.83□□□□□ -1
VPS4B-207ENST00000591519 TRAV27A0A087WT01 109 aa8.83□□□□□ -1
VPS4B-207ENST00000591519 TRBV4-1A0A0J9YWV2 114 aa8.83□□□□□ -1
VPS4B-207ENST00000591519 H3BSA7 217 aa8.83□□□□□ -1
VPS4B-207ENST00000591519 J3QLI3 93 aa8.83□□□□□ -1
VPS4B-207ENST00000591519 PLPP2O43688 288 aa8.83□□□□□ -1
VPS4B-207ENST00000591519 MPZL1O95297 269 aa8.83□□□□□ -1
VPS4B-207ENST00000591519 SLC2A10O95528 541 aa8.83□□□□□ -1
VPS4B-207ENST00000591519 PNPP00491 289 aa8.83□□□□□ -1
VPS4B-207ENST00000591519 IGHV1-46P01743 117 aa8.83□□□□□ -1
VPS4B-207ENST00000591519 IGHMP01871 453 aa8.83□□□□□ -1
VPS4B-207ENST00000591519 FABP3P05413 133 aa8.83□□□□□ -1
VPS4B-207ENST00000591519 ZNF32P17041 273 aa8.83□□□□□ -1
VPS4B-207ENST00000591519 MAKP20794 623 aa8.83□□□□□ -1
VPS4B-207ENST00000591519 WNT5AP41221 380 aa8.83□□□□□ -1
VPS4B-207ENST00000591519 GPR4P46093 362 aa8.83□□□□□ -1
VPS4B-207ENST00000591519 ZNF81P51508 661 aa8.83□□□□□ -1
VPS4B-207ENST00000591519 MVKQ03426 396 aa8.83□□□□□ -1
VPS4B-207ENST00000591519 HSF2Q03933 536 aa8.83□□□□□ -1
VPS4B-207ENST00000591519 TOP3AQ13472 1001 aaPredicted RBP8.83□□□□□ -1
VPS4B-207ENST00000591519 HFEQ30201 348 aa8.83□□□□□ -1
VPS4B-207ENST00000591519 TMEM255AQ5JRV8 349 aa8.83□□□□□ -1
VPS4B-207ENST00000591519 C12orf54Q6X4T0 127 aa8.83□□□□□ -1
VPS4B-207ENST00000591519 USP51Q70EK9 711 aa8.83□□□□□ -1
VPS4B-207ENST00000591519 RRM2BQ7LG56 351 aa8.83□□□□□ -1
VPS4B-207ENST00000591519 IGFN1Q86VF2 1251 aa8.83□□□□□ -1
VPS4B-207ENST00000591519 DHFR2Q86XF0 187 aa8.83□□□□□ -1
VPS4B-207ENST00000591519 ZNF101Q8IZC7 436 aa8.83□□□□□ -1
VPS4B-207ENST00000591519 LRRC75AQ8NAA5 344 aa8.83□□□□□ -1
VPS4B-207ENST00000591519 KLF14Q8TD94 323 aaPredicted RBP8.83□□□□□ -1
VPS4B-207ENST00000591519 ZNF418Q8TF45 676 aaPredicted RBP8.83□□□□□ -1
VPS4B-207ENST00000591519 FAM216AQ8WUB2 273 aa8.83□□□□□ -1
VPS4B-207ENST00000591519 RAB1CQ92928 201 aa8.83□□□□□ -1
VPS4B-207ENST00000591519 RAB39BQ96DA2 213 aa8.83□□□□□ -1
VPS4B-207ENST00000591519 BPIFA2Q96DR5 249 aa8.83□□□□□ -1
VPS4B-207ENST00000591519 C7orf34Q96L11 122 aa8.83□□□□□ -1
VPS4B-207ENST00000591519 LRGUKQ96M69 825 aa8.83□□□□□ -1
VPS4B-207ENST00000591519 RBP7Q96R05 134 aa8.83□□□□□ -1
VPS4B-207ENST00000591519 WACQ9BTA9 647 aa8.83□□□□□ -1
VPS4B-207ENST00000591519 TMPRSS13Q9BYE2 586 aa8.83□□□□□ -1
VPS4B-207ENST00000591519 OR51B6Q9H340 312 aa8.83□□□□□ -1
VPS4B-207ENST00000591519 SAP30LQ9HAJ7 183 aa8.83□□□□□ -1
VPS4B-207ENST00000591519 LPAR2Q9HBW0 351 aa8.83□□□□□ -1
VPS4B-207ENST00000591519 CYSLTR2Q9NS75 346 aa8.83□□□□□ -1
VPS4B-207ENST00000591519 ACTR3BQ9P1U1 418 aa8.83□□□□□ -1
VPS4B-207ENST00000591519 PRPF19Q9UMS4 504 aaKnown RBP8.83□□□□□ -1
VPS4B-207ENST00000591519 PCDHB10Q9UN67 800 aa8.83□□□□□ -1
VPS4B-207ENST00000591519 WIPI2Q9Y4P8 454 aa8.83□□□□□ -1
VPS4B-207ENST00000591519 TIMM10BQ9Y5J6 103 aa8.83□□□□□ -1
VPS4B-207ENST00000591519 WNK2Q9Y3S1 2297 aa8.82□□□□□ -1
VPS4B-207ENST00000591519 A0A087WUU8 490 aa8.82□□□□□ -1
VPS4B-207ENST00000591519 A0A0G2JMP0 313 aa8.82□□□□□ -1
VPS4B-207ENST00000591519 A0A0X1KG70 313 aa8.82□□□□□ -1
VPS4B-207ENST00000591519 TMEM89A2RUT3 159 aa8.82□□□□□ -1
VPS4B-207ENST00000591519 C5orf49A4QMS7 147 aa8.82□□□□□ -1
VPS4B-207ENST00000591519 EFCAB9A8MZ26 197 aa8.82□□□□□ -1
VPS4B-207ENST00000591519 CLDN25C9JDP6 229 aa8.82□□□□□ -1
VPS4B-207ENST00000591519 PRSS23O95084 383 aa8.82□□□□□ -1
VPS4B-207ENST00000591519 IGHV2-5P01817 119 aa8.82□□□□□ -1
VPS4B-207ENST00000591519 SEMG1P04279 462 aa8.82□□□□□ -1
VPS4B-207ENST00000591519 CD55P08174 381 aa8.82□□□□□ -1
VPS4B-207ENST00000591519 CST2P09228 141 aa8.82□□□□□ -1
VPS4B-207ENST00000591519 H2AFB1P0C5Y9 115 aa8.82□□□□□ -1
VPS4B-207ENST00000591519 H2AFB2P0C5Z0 115 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms