RNA–Protein interactions for RNA: ENST00000586863.5

ATG4D-206, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 4

Gene ATG4D, Length 529 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-206ENST00000586863 C4orf45Q96LM5 186 aa11.84□□□□□ -0.51
ATG4D-206ENST00000586863 RBM4Q9BWF3 364 aaKnown RBP11.84□□□□□ -0.51
ATG4D-206ENST00000586863 SUCNR1Q9BXA5 334 aa11.84□□□□□ -0.51
ATG4D-206ENST00000586863 C7orf69Q9H7B7 122 aa11.84□□□□□ -0.51
ATG4D-206ENST00000586863 CYSLTR2Q9NS75 346 aa11.84□□□□□ -0.51
ATG4D-206ENST00000586863 CGGBP1Q9UFW8 167 aaPredicted RBP11.84□□□□□ -0.51
ATG4D-206ENST00000586863 ELOVL7A1L3X0 281 aa11.83□□□□□ -0.52
ATG4D-206ENST00000586863 HTR3EA5X5Y0 456 aa11.83□□□□□ -0.52
ATG4D-206ENST00000586863 A6NIZ1 184 aa11.83□□□□□ -0.52
ATG4D-206ENST00000586863 EFCAB9A8MZ26 197 aa11.83□□□□□ -0.52
ATG4D-206ENST00000586863 TIMM8AO60220 97 aaPredicted RBP11.83□□□□□ -0.52
ATG4D-206ENST00000586863 ABHD16AO95870 558 aa11.83□□□□□ -0.52
ATG4D-206ENST00000586863 IGHV2-70P01814 119 aa11.83□□□□□ -0.52
ATG4D-206ENST00000586863 ZNF26P17031 533 aaPredicted RBP11.83□□□□□ -0.52
ATG4D-206ENST00000586863 ZFP36P26651 326 aaKnown RBP11.83□□□□□ -0.52
ATG4D-206ENST00000586863 PRDX6P30041 224 aa11.83□□□□□ -0.52
ATG4D-206ENST00000586863 LIPAP38571 399 aa11.83□□□□□ -0.52
ATG4D-206ENST00000586863 GUCA1AP43080 201 aaPredicted RBP11.83□□□□□ -0.52
ATG4D-206ENST00000586863 GPR4P46093 362 aa11.83□□□□□ -0.52
ATG4D-206ENST00000586863 ARHGDIAP52565 204 aa11.83□□□□□ -0.52
ATG4D-206ENST00000586863 RAP1BP61224 184 aa11.83□□□□□ -0.52
ATG4D-206ENST00000586863 RAP1AP62834 184 aa11.83□□□□□ -0.52
ATG4D-206ENST00000586863 TNFAIP6P98066 277 aaPredicted RBP11.83□□□□□ -0.52
ATG4D-206ENST00000586863 PRKCDQ05655 676 aa11.83□□□□□ -0.52
ATG4D-206ENST00000586863 SLC3A1Q07837 685 aa11.83□□□□□ -0.52
ATG4D-206ENST00000586863 PSG7Q13046 419 aa11.83□□□□□ -0.52
ATG4D-206ENST00000586863 TRAM2Q15035 370 aa11.83□□□□□ -0.52
ATG4D-206ENST00000586863 OTPQ5XKR4 325 aa11.83□□□□□ -0.52
ATG4D-206ENST00000586863 ARPINQ7Z6K5 226 aa11.83□□□□□ -0.52
ATG4D-206ENST00000586863 OAFQ86UD1 273 aa11.83□□□□□ -0.52
ATG4D-206ENST00000586863 C1orf174Q8IYL3 243 aa11.83□□□□□ -0.52
ATG4D-206ENST00000586863 BPIFB2Q8N4F0 458 aa11.83□□□□□ -0.52
ATG4D-206ENST00000586863 ZDHHC22Q8N966 263 aa11.83□□□□□ -0.52
ATG4D-206ENST00000586863 CCDC197Q8NCU1 140 aa11.83□□□□□ -0.52
ATG4D-206ENST00000586863 NANPQ8TBE9 248 aa11.83□□□□□ -0.52
ATG4D-206ENST00000586863 C22orf15Q8WYQ4 148 aa11.83□□□□□ -0.52
ATG4D-206ENST00000586863 JMJD8Q96S16 334 aa11.83□□□□□ -0.52
ATG4D-206ENST00000586863 FNDC11Q9BVV2 318 aa11.83□□□□□ -0.52
ATG4D-206ENST00000586863 MYLK2Q9H1R3 596 aa11.83□□□□□ -0.52
ATG4D-206ENST00000586863 ELOVL3Q9HB03 270 aa11.83□□□□□ -0.52
ATG4D-206ENST00000586863 CMTM6Q9NX76 183 aa11.83□□□□□ -0.52
ATG4D-206ENST00000586863 ZDHHC8Q9ULC8 765 aa11.83□□□□□ -0.52
ATG4D-206ENST00000586863 NDRG4Q9ULP0 352 aaKnown RBP11.83□□□□□ -0.52
ATG4D-206ENST00000586863 AP3M1Q9Y2T2 418 aa11.83□□□□□ -0.52
ATG4D-206ENST00000586863 ADAM18Q9Y3Q7 739 aa11.83□□□□□ -0.52
ATG4D-206ENST00000586863 NPTNQ9Y639 398 aa11.83□□□□□ -0.52
ATG4D-206ENST00000586863 A0A087WUU8 490 aa11.82□□□□□ -0.52
ATG4D-206ENST00000586863 C12orf71A8MTZ7 269 aa11.82□□□□□ -0.52
ATG4D-206ENST00000586863 CDC42EP2O14613 210 aa11.82□□□□□ -0.52
ATG4D-206ENST00000586863 DOK2O60496 412 aa11.82□□□□□ -0.52
ATG4D-206ENST00000586863 PRSS23O95084 383 aa11.82□□□□□ -0.52
ATG4D-206ENST00000586863 IFNW1P05000 195 aa11.82□□□□□ -0.52
ATG4D-206ENST00000586863 GATA3P23771 443 aa11.82□□□□□ -0.52
ATG4D-206ENST00000586863 IFNA8P32881 189 aa11.82□□□□□ -0.52
ATG4D-206ENST00000586863 HTR5AP47898 357 aa11.82□□□□□ -0.52
ATG4D-206ENST00000586863 SLC9A3P48764 834 aa11.82□□□□□ -0.52
ATG4D-206ENST00000586863 CDK5R2Q13319 367 aa11.82□□□□□ -0.52
ATG4D-206ENST00000586863 MESTQ5EB52 335 aa11.82□□□□□ -0.52
ATG4D-206ENST00000586863 ZMAT1Q5H9K5 638 aa11.82□□□□□ -0.52
ATG4D-206ENST00000586863 TBPL2Q6SJ96 375 aa11.82□□□□□ -0.52
ATG4D-206ENST00000586863 Q6ZR03 302 aa11.82□□□□□ -0.52
ATG4D-206ENST00000586863 SYT9Q86SS6 491 aa11.82□□□□□ -0.52
ATG4D-206ENST00000586863 C3orf56Q8N813 242 aa11.82□□□□□ -0.52
ATG4D-206ENST00000586863 DEFB108BQ8NET1 73 aa11.82□□□□□ -0.52
ATG4D-206ENST00000586863 ACOT11Q8WXI4 607 aaPredicted RBP11.82□□□□□ -0.52
ATG4D-206ENST00000586863 LZICQ8WZA0 190 aa11.82□□□□□ -0.52
ATG4D-206ENST00000586863 Q96M85 177 aa11.82□□□□□ -0.52
ATG4D-206ENST00000586863 DCLRE1CQ96SD1 692 aaKnown RBP11.82□□□□□ -0.52
ATG4D-206ENST00000586863 DIRC2Q96SL1 478 aa11.82□□□□□ -0.52
ATG4D-206ENST00000586863 HOPXQ9BPY8 73 aaPredicted RBP11.82□□□□□ -0.52
ATG4D-206ENST00000586863 MMP26Q9NRE1 261 aa11.82□□□□□ -0.52
ATG4D-206ENST00000586863 TMEM106BQ9NUM4 274 aa11.82□□□□□ -0.52
ATG4D-206ENST00000586863 PURGQ9UJV8 347 aaKnown RBP11.82□□□□□ -0.52
ATG4D-206ENST00000586863 ERICH4A6NGS2 130 aa11.81□□□□□ -0.52
ATG4D-206ENST00000586863 NDUFAB1O14561 156 aa11.81□□□□□ -0.52
ATG4D-206ENST00000586863 ZNF682O95780 498 aa11.81□□□□□ -0.52
ATG4D-206ENST00000586863 CD14P08571 375 aa11.81□□□□□ -0.52
ATG4D-206ENST00000586863 COX5BP10606 129 aa11.81□□□□□ -0.52
ATG4D-206ENST00000586863 CTLA4P16410 223 aa11.81□□□□□ -0.52
ATG4D-206ENST00000586863 RPL4P36578 427 aaKnown RBP11.81□□□□□ -0.52
ATG4D-206ENST00000586863 LIMS1P48059 325 aa11.81□□□□□ -0.52
ATG4D-206ENST00000586863 ERFP50548 548 aa11.81□□□□□ -0.52
ATG4D-206ENST00000586863 NUDT2P50583 147 aa11.81□□□□□ -0.52
ATG4D-206ENST00000586863 SEC61A1P61619 476 aaKnown RBP11.81□□□□□ -0.52
ATG4D-206ENST00000586863 SCRN3Q0VDG4 424 aa11.81□□□□□ -0.52
ATG4D-206ENST00000586863 ANKDD1AQ495B1 522 aa11.81□□□□□ -0.52
ATG4D-206ENST00000586863 ZNF730Q6ZMV8 503 aa11.81□□□□□ -0.52
ATG4D-206ENST00000586863 MBOAT2Q6ZWT7 520 aa11.81□□□□□ -0.52
ATG4D-206ENST00000586863 VASH1Q7L8A9 365 aaPredicted RBP11.81□□□□□ -0.52
ATG4D-206ENST00000586863 FAM122BQ7Z309 247 aa11.81□□□□□ -0.52
ATG4D-206ENST00000586863 TREML1Q86YW5 311 aa11.81□□□□□ -0.52
ATG4D-206ENST00000586863 SLC15A3Q8IY34 581 aa11.81□□□□□ -0.52
ATG4D-206ENST00000586863 FAM156AQ8NDB6 213 aa11.81□□□□□ -0.52
ATG4D-206ENST00000586863 NPEPL1Q8NDH3 523 aa11.81□□□□□ -0.52
ATG4D-206ENST00000586863 ST7LQ8TDW4 575 aa11.81□□□□□ -0.52
ATG4D-206ENST00000586863 SLC7A6Q92536 515 aa11.81□□□□□ -0.52
ATG4D-206ENST00000586863 DVL3Q92997 716 aaPredicted RBP11.81□□□□□ -0.52
ATG4D-206ENST00000586863 TBCCD1Q9NVR7 557 aa11.81□□□□□ -0.52
ATG4D-206ENST00000586863 PPIAL4EA0A075B759 164 aa11.8□□□□□ -0.52
ATG4D-206ENST00000586863 PPIAL4CA0A0B4J2A2 164 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms