RNA–Protein interactions for RNA: ENST00000582092.1

SS18-220, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best)

Gene SS18, Length 215 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-220ENST00000582092 MCTS1Q9ULC4 181 aaKnown RBP8.26□□□□□ -1.09
SS18-220ENST00000582092 KLHDC2Q9Y2U9 406 aa8.26□□□□□ -1.09
SS18-220ENST00000582092 EML6Q6ZMW3 1958 aa8.25□□□□□ -1.09
SS18-220ENST00000582092 TMEM269A0A1B0GVZ9 245 aa8.25□□□□□ -1.09
SS18-220ENST00000582092 LRRC3CA6NJW4 275 aa8.25□□□□□ -1.09
SS18-220ENST00000582092 ANXA2P2A6NMY6 339 aa8.25□□□□□ -1.09
SS18-220ENST00000582092 NOTOA8MTQ0 251 aa8.25□□□□□ -1.09
SS18-220ENST00000582092 GPR171O14626 319 aa8.25□□□□□ -1.09
SS18-220ENST00000582092 TBX1O43435 398 aa8.25□□□□□ -1.09
SS18-220ENST00000582092 NME2P1O60361 137 aa8.25□□□□□ -1.09
SS18-220ENST00000582092 UPK1BO75841 260 aa8.25□□□□□ -1.09
SS18-220ENST00000582092 NCR1O76036 304 aa8.25□□□□□ -1.09
SS18-220ENST00000582092 NEURL1O76050 574 aa8.25□□□□□ -1.09
SS18-220ENST00000582092 MPZL1O95297 269 aa8.25□□□□□ -1.09
SS18-220ENST00000582092 RAF1P04049 648 aa8.25□□□□□ -1.09
SS18-220ENST00000582092 HPNP05981 417 aa8.25□□□□□ -1.09
SS18-220ENST00000582092 ANXA2P07355 339 aaKnown RBP8.25□□□□□ -1.09
SS18-220ENST00000582092 UCHL1P09936 223 aa8.25□□□□□ -1.09
SS18-220ENST00000582092 OCMP0CE72 109 aaPredicted RBP8.25□□□□□ -1.09
SS18-220ENST00000582092 PGA4P0DJD7 388 aa8.25□□□□□ -1.09
SS18-220ENST00000582092 PGA3P0DJD8 388 aa8.25□□□□□ -1.09
SS18-220ENST00000582092 SRMP19623 302 aa8.25□□□□□ -1.09
SS18-220ENST00000582092 NME2P22392 152 aa8.25□□□□□ -1.09
SS18-220ENST00000582092 PTGS2P35354 604 aa8.25□□□□□ -1.09
SS18-220ENST00000582092 RFC3P40938 356 aa8.25□□□□□ -1.09
SS18-220ENST00000582092 RANBP1P43487 201 aa8.25□□□□□ -1.09
SS18-220ENST00000582092 SOX2P48431 317 aa8.25□□□□□ -1.09
SS18-220ENST00000582092 STARP49675 285 aa8.25□□□□□ -1.09
SS18-220ENST00000582092 CCR9P51686 369 aa8.25□□□□□ -1.09
SS18-220ENST00000582092 CLDN15P56746 228 aa8.25□□□□□ -1.09
SS18-220ENST00000582092 H3F3AP84243 136 aa8.25□□□□□ -1.09
SS18-220ENST00000582092 ROM1Q03395 351 aa8.25□□□□□ -1.09
SS18-220ENST00000582092 IL18Q14116 193 aa8.25□□□□□ -1.09
SS18-220ENST00000582092 INSL4Q14641 139 aa8.25□□□□□ -1.09
SS18-220ENST00000582092 POU4F3Q15319 338 aa8.25□□□□□ -1.09
SS18-220ENST00000582092 ODF4Q2M2E3 257 aa8.25□□□□□ -1.09
SS18-220ENST00000582092 ZNF684Q5T5D7 378 aa8.25□□□□□ -1.09
SS18-220ENST00000582092 BCL2L15Q5TBC7 163 aa8.25□□□□□ -1.09
SS18-220ENST00000582092 TMEM244Q5VVB8 128 aa8.25□□□□□ -1.09
SS18-220ENST00000582092 OR7E24Q6IFN5 339 aa8.25□□□□□ -1.09
SS18-220ENST00000582092 XKRXQ6PP77 449 aa8.25□□□□□ -1.09
SS18-220ENST00000582092 SLC25A47Q6Q0C1 308 aa8.25□□□□□ -1.09
SS18-220ENST00000582092 METAP1DQ6UB28 335 aaPredicted RBP8.25□□□□□ -1.09
SS18-220ENST00000582092 LINC00346Q8IVM7 164 aa8.25□□□□□ -1.09
SS18-220ENST00000582092 MFSD4AQ8N468 514 aa8.25□□□□□ -1.09
SS18-220ENST00000582092 OR10D3Q8NH80 312 aa8.25□□□□□ -1.09
SS18-220ENST00000582092 RNF128Q8TEB7 428 aa8.25□□□□□ -1.09
SS18-220ENST00000582092 HAS2Q92819 552 aa8.25□□□□□ -1.09
SS18-220ENST00000582092 ABTB1Q969K4 478 aaPredicted RBP8.25□□□□□ -1.09
SS18-220ENST00000582092 NTNG2Q96CW9 530 aa8.25□□□□□ -1.09
SS18-220ENST00000582092 COX4I2Q96KJ9 171 aa8.25□□□□□ -1.09
SS18-220ENST00000582092 PGLYRP3Q96LB9 341 aa8.25□□□□□ -1.09
SS18-220ENST00000582092 WDFY2Q96P53 400 aa8.25□□□□□ -1.09
SS18-220ENST00000582092 OR14A2Q96R54 314 aa8.25□□□□□ -1.09
SS18-220ENST00000582092 UCN2Q96RP3 112 aa8.25□□□□□ -1.09
SS18-220ENST00000582092 MRI1Q9BV20 369 aa8.25□□□□□ -1.09
SS18-220ENST00000582092 CCDC32Q9BV29 185 aa8.25□□□□□ -1.09
SS18-220ENST00000582092 MRPL13Q9BYD1 178 aaKnown RBP8.25□□□□□ -1.09
SS18-220ENST00000582092 TTTY12Q9BZ98 90 aa8.25□□□□□ -1.09
SS18-220ENST00000582092 RNF32Q9H0A6 362 aa8.25□□□□□ -1.09
SS18-220ENST00000582092 NIPAL2Q9H841 368 aa8.25□□□□□ -1.09
SS18-220ENST00000582092 NOX4Q9NPH5 578 aa8.25□□□□□ -1.09
SS18-220ENST00000582092 PARPBPQ9NWS1 579 aa8.25□□□□□ -1.09
SS18-220ENST00000582092 QPCTLQ9NXS2 382 aa8.25□□□□□ -1.09
SS18-220ENST00000582092 EMC3Q9P0I2 261 aa8.25□□□□□ -1.09
SS18-220ENST00000582092 FRRS1LQ9P0K9 344 aa8.25□□□□□ -1.09
SS18-220ENST00000582092 ING1Q9UK53 422 aaPredicted RBP8.25□□□□□ -1.09
SS18-220ENST00000582092 DHDHQ9UQ10 334 aa8.25□□□□□ -1.09
SS18-220ENST00000582092 R4GMQ9 66 aa8.25□□□□□ -1.09
SS18-220ENST00000582092 NBASA2RRP1 2371 aa8.24□□□□□ -1.09
SS18-220ENST00000582092 hCG_2014768A0A024R1R8 64 aa8.24□□□□□ -1.09
SS18-220ENST00000582092 PFDN1O60925 122 aa8.24□□□□□ -1.09
SS18-220ENST00000582092 TMEM127O75204 238 aa8.24□□□□□ -1.09
SS18-220ENST00000582092 UPK3AO75631 287 aa8.24□□□□□ -1.09
SS18-220ENST00000582092 ZFPL1O95159 310 aa8.24□□□□□ -1.09
SS18-220ENST00000582092 ACTL6AO96019 429 aa8.24□□□□□ -1.09
SS18-220ENST00000582092 APOC1P02654 83 aa8.24□□□□□ -1.09
SS18-220ENST00000582092 MSR1P21757 451 aa8.24□□□□□ -1.09
SS18-220ENST00000582092 ETV6P41212 452 aa8.24□□□□□ -1.09
SS18-220ENST00000582092 MAGEA5P43359 124 aa8.24□□□□□ -1.09
SS18-220ENST00000582092 P2RY4P51582 365 aa8.24□□□□□ -1.09
SS18-220ENST00000582092 CLDN20P56880 219 aa8.24□□□□□ -1.09
SS18-220ENST00000582092 B3GALT5-AS1P59052 145 aa8.24□□□□□ -1.09
SS18-220ENST00000582092 SCN1BQ07699 218 aa8.24□□□□□ -1.09
SS18-220ENST00000582092 SFXN4Q6P4A7 337 aa8.24□□□□□ -1.09
SS18-220ENST00000582092 FDX2Q6P4F2 183 aa8.24□□□□□ -1.09
SS18-220ENST00000582092 IGFL3Q6UXB1 125 aa8.24□□□□□ -1.09
SS18-220ENST00000582092 UNQ9370/PRO34162Q6UXP9 181 aa8.24□□□□□ -1.09
SS18-220ENST00000582092 FCRLAQ7L513 359 aa8.24□□□□□ -1.09
SS18-220ENST00000582092 PNPLA5Q7Z6Z6 429 aaPredicted RBP8.24□□□□□ -1.09
SS18-220ENST00000582092 CCDC190Q86UF4 302 aa8.24□□□□□ -1.09
SS18-220ENST00000582092 ZNF227Q86WZ6 799 aa8.24□□□□□ -1.09
SS18-220ENST00000582092 LAX1Q8IWV1 398 aa8.24□□□□□ -1.09
SS18-220ENST00000582092 GDPD1Q8N9F7 314 aa8.24□□□□□ -1.09
SS18-220ENST00000582092 POC5Q8NA72 575 aa8.24□□□□□ -1.09
SS18-220ENST00000582092 C19orf18Q8NEA5 215 aa8.24□□□□□ -1.09
SS18-220ENST00000582092 GJC3Q8NFK1 279 aa8.24□□□□□ -1.09
SS18-220ENST00000582092 OR13C3Q8NGS6 347 aa8.24□□□□□ -1.09
SS18-220ENST00000582092 OR13C5Q8NGS8 318 aa8.24□□□□□ -1.09
SS18-220ENST00000582092 CPT1CQ8TCG5 803 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms