RNA–Protein interactions for RNA: ENST00000574501.1

SMG6-215, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

Gene SMG6, Length 2,419 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-215ENST00000574501 CMBLQ96DG6 245 aa12.99□□□□□ -0.33
SMG6-215ENST00000574501 KIRREL1Q96J84 757 aa12.99□□□□□ -0.33
SMG6-215ENST00000574501 SMIM8Q96KF7 97 aa12.99□□□□□ -0.33
SMG6-215ENST00000574501 C4orf45Q96LM5 186 aa12.99□□□□□ -0.33
SMG6-215ENST00000574501 DCBLD2Q96PD2 775 aa12.99□□□□□ -0.33
SMG6-215ENST00000574501 PRRT1Q99946 306 aa12.99□□□□□ -0.33
SMG6-215ENST00000574501 KXD1Q9BQD3 176 aa12.99□□□□□ -0.33
SMG6-215ENST00000574501 SLC17A5Q9NRA2 495 aa12.99□□□□□ -0.33
SMG6-215ENST00000574501 KCNG2Q9UJ96 466 aa12.99□□□□□ -0.33
SMG6-215ENST00000574501 EFSO43281 561 aa12.98□□□□□ -0.33
SMG6-215ENST00000574501 IGKV1D-16P01601 117 aa12.98□□□□□ -0.33
SMG6-215ENST00000574501 CD2P06729 351 aa12.98□□□□□ -0.33
SMG6-215ENST00000574501 PAX6P26367 422 aa12.98□□□□□ -0.33
SMG6-215ENST00000574501 TACR3P29371 465 aa12.98□□□□□ -0.33
SMG6-215ENST00000574501 TLX1P31314 330 aaPredicted RBP12.98□□□□□ -0.33
SMG6-215ENST00000574501 SGCAQ16586 387 aa12.98□□□□□ -0.33
SMG6-215ENST00000574501 KLHL26Q53HC5 615 aa12.98□□□□□ -0.33
SMG6-215ENST00000574501 AWAT1Q58HT5 328 aa12.98□□□□□ -0.33
SMG6-215ENST00000574501 EXOSC6Q5RKV6 272 aaKnown RBP12.98□□□□□ -0.33
SMG6-215ENST00000574501 CDPF1Q6NVV7 123 aa12.98□□□□□ -0.33
SMG6-215ENST00000574501 PPP1R3BQ86XI6 285 aa12.98□□□□□ -0.33
SMG6-215ENST00000574501 FAM24BQ8N5W8 94 aa12.98□□□□□ -0.33
SMG6-215ENST00000574501 ZNF563Q8TA94 476 aa12.98□□□□□ -0.33
SMG6-215ENST00000574501 STACQ99469 402 aa12.98□□□□□ -0.33
SMG6-215ENST00000574501 GAS2L1Q99501 681 aaPredicted RBP12.98□□□□□ -0.33
SMG6-215ENST00000574501 PARP12Q9H0J9 701 aaKnown RBP12.98□□□□□ -0.33
SMG6-215ENST00000574501 TRPM6Q9BX84 2022 aa12.98□□□□□ -0.33
SMG6-215ENST00000574501 MPDZO75970 2070 aa12.98□□□□□ -0.33
SMG6-215ENST00000574501 EIF1AYO14602 144 aaKnown RBP12.98□□□□□ -0.33
SMG6-215ENST00000574501 RHOP08100 348 aa12.98□□□□□ -0.33
SMG6-215ENST00000574501 FCGR3AP08637 254 aa12.98□□□□□ -0.33
SMG6-215ENST00000574501 RAB5AP20339 215 aa12.98□□□□□ -0.33
SMG6-215ENST00000574501 LAP3P28838 519 aa12.98□□□□□ -0.33
SMG6-215ENST00000574501 CMPK1P30085 196 aa12.98□□□□□ -0.33
SMG6-215ENST00000574501 EIF1AXP47813 144 aaKnown RBP12.98□□□□□ -0.33
SMG6-215ENST00000574501 CTXN1P60606 82 aa12.98□□□□□ -0.33
SMG6-215ENST00000574501 RASGEF1BQ0VAM2 473 aa12.98□□□□□ -0.33
SMG6-215ENST00000574501 TCEAL5Q5H9L2 206 aa12.98□□□□□ -0.33
SMG6-215ENST00000574501 ADAMTSL4Q6UY14 1074 aa12.98□□□□□ -0.33
SMG6-215ENST00000574501 TRAPPC6BQ86SZ2 158 aa12.98□□□□□ -0.33
SMG6-215ENST00000574501 FJX1Q86VR8 437 aa12.98□□□□□ -0.33
SMG6-215ENST00000574501 SLC39A11Q8N1S5 342 aa12.98□□□□□ -0.33
SMG6-215ENST00000574501 EXD3Q8N9H8 876 aa12.98□□□□□ -0.33
SMG6-215ENST00000574501 OR51A2Q8NGJ7 313 aa12.98□□□□□ -0.33
SMG6-215ENST00000574501 DNAJA3Q96EY1 480 aa12.98□□□□□ -0.33
SMG6-215ENST00000574501 CHRDQ9H2X0 955 aa12.98□□□□□ -0.33
SMG6-215ENST00000574501 FN3KRPQ9HA64 309 aa12.98□□□□□ -0.33
SMG6-215ENST00000574501 MBNL1Q9NR56 388 aaKnown RBP12.98□□□□□ -0.33
SMG6-215ENST00000574501 RNF186Q9NXI6 227 aa12.98□□□□□ -0.33
SMG6-215ENST00000574501 TAS2R4Q9NYW5 299 aa12.98□□□□□ -0.33
SMG6-215ENST00000574501 DAPP1Q9UN19 280 aa12.98□□□□□ -0.33
SMG6-215ENST00000574501 DMRT1Q9Y5R6 373 aa12.98□□□□□ -0.33
SMG6-215ENST00000574501 HEATR5AQ86XA9 2040 aa12.97□□□□□ -0.33
SMG6-215ENST00000574501 C7orf77A4D0Y5 90 aa12.97□□□□□ -0.33
SMG6-215ENST00000574501 FAM157AC9JC47 383 aa12.97□□□□□ -0.33
SMG6-215ENST00000574501 PRRT4C9JH25 899 aa12.97□□□□□ -0.33
SMG6-215ENST00000574501 PRAMEF26H0Y7S4 382 aa12.97□□□□□ -0.33
SMG6-215ENST00000574501 M0R036 132 aa12.97□□□□□ -0.33
SMG6-215ENST00000574501 AP4M1O00189 453 aa12.97□□□□□ -0.33
SMG6-215ENST00000574501 MFNGO00587 321 aa12.97□□□□□ -0.33
SMG6-215ENST00000574501 PPIHO43447 177 aaKnown RBP12.97□□□□□ -0.33
SMG6-215ENST00000574501 FBXO24O75426 580 aa12.97□□□□□ -0.33
SMG6-215ENST00000574501 ADAP1O75689 374 aa12.97□□□□□ -0.33
SMG6-215ENST00000574501 ARG1P05089 322 aa12.97□□□□□ -0.33
SMG6-215ENST00000574501 INHAP05111 366 aa12.97□□□□□ -0.33
SMG6-215ENST00000574501 NME1P15531 152 aaKnown RBP12.97□□□□□ -0.33
SMG6-215ENST00000574501 ALOX5APP20292 161 aa12.97□□□□□ -0.33
SMG6-215ENST00000574501 HRH1P35367 487 aa12.97□□□□□ -0.33
SMG6-215ENST00000574501 STARD6P59095 220 aa12.97□□□□□ -0.33
SMG6-215ENST00000574501 SQSTM1Q13501 440 aa12.97□□□□□ -0.33
SMG6-215ENST00000574501 EBPQ15125 230 aaKnown RBP12.97□□□□□ -0.33
SMG6-215ENST00000574501 TMEM225Q6GV28 225 aa12.97□□□□□ -0.33
SMG6-215ENST00000574501 PRSS41Q7RTY9 318 aa12.97□□□□□ -0.33
SMG6-215ENST00000574501 SFTPA1Q8IWL2 248 aa12.97□□□□□ -0.33
SMG6-215ENST00000574501 SAMD14Q8IZD0 417 aaPredicted RBP12.97□□□□□ -0.33
SMG6-215ENST00000574501 JAGN1Q8N5M9 183 aa12.97□□□□□ -0.33
SMG6-215ENST00000574501 ZNF558Q96NG5 402 aa12.97□□□□□ -0.33
SMG6-215ENST00000574501 SLC17A9Q9BYT1 436 aa12.97□□□□□ -0.33
SMG6-215ENST00000574501 ELOVL3Q9HB03 270 aa12.97□□□□□ -0.33
SMG6-215ENST00000574501 ASH2LQ9UBL3 628 aa12.97□□□□□ -0.33
SMG6-215ENST00000574501 TIMM10BQ9Y5J6 103 aa12.97□□□□□ -0.33
SMG6-215ENST00000574501 WIF1Q9Y5W5 379 aa12.97□□□□□ -0.33
SMG6-215ENST00000574501 A0A087WUJ7 227 aa12.97□□□□□ -0.33
SMG6-215ENST00000574501 TRBV6-7A0A0A0MS04 114 aa12.97□□□□□ -0.33
SMG6-215ENST00000574501 DUS4LO95620 317 aaKnown RBP12.97□□□□□ -0.33
SMG6-215ENST00000574501 OR8U9P0C7N5 309 aa12.97□□□□□ -0.33
SMG6-215ENST00000574501 RAB2AP61019 212 aa12.97□□□□□ -0.33
SMG6-215ENST00000574501 DEFA6Q01524 100 aa12.97□□□□□ -0.33
SMG6-215ENST00000574501 SPOCK1Q08629 439 aa12.97□□□□□ -0.33
SMG6-215ENST00000574501 MEF2DQ14814 521 aa12.97□□□□□ -0.33
SMG6-215ENST00000574501 RPL7L1Q6DKI1 246 aaKnown RBP12.97□□□□□ -0.33
SMG6-215ENST00000574501 ZNF425Q6IV72 752 aa12.97□□□□□ -0.33
SMG6-215ENST00000574501 OR8U1Q8NH10 309 aa12.97□□□□□ -0.33
SMG6-215ENST00000574501 OR8D1Q8WZ84 308 aa12.97□□□□□ -0.33
SMG6-215ENST00000574501 SAT2Q96F10 170 aaPredicted RBP12.97□□□□□ -0.33
SMG6-215ENST00000574501 RHOVQ96L33 236 aa12.97□□□□□ -0.33
SMG6-215ENST00000574501 OCSTAMPQ9BR26 566 aa12.97□□□□□ -0.33
SMG6-215ENST00000574501 TEX101Q9BY14 249 aa12.97□□□□□ -0.33
SMG6-215ENST00000574501 SLCO5A1Q9H2Y9 848 aa12.97□□□□□ -0.33
SMG6-215ENST00000574501 TMPRSS5Q9H3S3 457 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms