RNA–Protein interactions for RNA: ENST00000573600.5

CTDNEP1-208, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CTDNEP1, Length 1,724 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-208ENST00000573600 ZCCHC4Q9H5U6 513 aa25.77■■□□□ 1.72
CTDNEP1-208ENST00000573600 GVINP1Q7Z2Y8 2422 aa25.77■■□□□ 1.72
CTDNEP1-208ENST00000573600 NOTOA8MTQ0 251 aa25.77■■□□□ 1.72
CTDNEP1-208ENST00000573600 UPK1BO75841 260 aa25.77■■□□□ 1.72
CTDNEP1-208ENST00000573600 SYNGR4O95473 234 aa25.77■■□□□ 1.72
CTDNEP1-208ENST00000573600 MSR1P21757 451 aa25.77■■□□□ 1.72
CTDNEP1-208ENST00000573600 SRYQ05066 204 aa25.77■■□□□ 1.72
CTDNEP1-208ENST00000573600 KLHL24Q6TFL4 600 aa25.77■■□□□ 1.72
CTDNEP1-208ENST00000573600 IL17RDQ8NFM7 739 aa25.77■■□□□ 1.72
CTDNEP1-208ENST00000573600 SLITRK2Q9H156 845 aa25.77■■□□□ 1.72
CTDNEP1-208ENST00000573600 OCEL1Q9H607 264 aa25.77■■□□□ 1.72
CTDNEP1-208ENST00000573600 GTF2A1LQ9UNN4 478 aa25.77■■□□□ 1.72
CTDNEP1-208ENST00000573600 A0A087WV48 116 aa25.76■■□□□ 1.71
CTDNEP1-208ENST00000573600 OR10A3P58181 314 aa25.76■■□□□ 1.71
CTDNEP1-208ENST00000573600 MFGE8Q08431 387 aaPredicted RBP25.76■■□□□ 1.71
CTDNEP1-208ENST00000573600 RGS21Q2M5E4 152 aa25.76■■□□□ 1.71
CTDNEP1-208ENST00000573600 TMEM45BQ96B21 275 aa25.76■■□□□ 1.71
CTDNEP1-208ENST00000573600 DIRAS2Q96HU8 199 aa25.76■■□□□ 1.71
CTDNEP1-208ENST00000573600 SH3GL3Q99963 347 aa25.76■■□□□ 1.71
CTDNEP1-208ENST00000573600 NIPAL2Q9H841 368 aa25.76■■□□□ 1.71
CTDNEP1-208ENST00000573600 B3GAT2Q9NPZ5 323 aa25.76■■□□□ 1.71
CTDNEP1-208ENST00000573600 MCTS1Q9ULC4 181 aaKnown RBP25.76■■□□□ 1.71
CTDNEP1-208ENST00000573600 KCNMB2Q9Y691 235 aa25.76■■□□□ 1.71
CTDNEP1-208ENST00000573600 ZNF878C9JN71 531 aa25.75■■□□□ 1.71
CTDNEP1-208ENST00000573600 SLC19A2O60779 497 aa25.75■■□□□ 1.71
CTDNEP1-208ENST00000573600 SGCAQ16586 387 aa25.75■■□□□ 1.71
CTDNEP1-208ENST00000573600 CCDC32Q9BV29 185 aa25.75■■□□□ 1.71
CTDNEP1-208ENST00000573600 RBM24Q9BX46 236 aaKnown RBP25.75■■□□□ 1.71
CTDNEP1-208ENST00000573600 FBXL3Q9UKT7 428 aa25.75■■□□□ 1.71
CTDNEP1-208ENST00000573600 SLC22A13Q9Y226 551 aa25.75■■□□□ 1.71
CTDNEP1-208ENST00000573600 EMC9Q9Y3B6 208 aa25.75■■□□□ 1.71
CTDNEP1-208ENST00000573600 V9GYH0 126 aa25.75■■□□□ 1.71
CTDNEP1-208ENST00000573600 CACNA1CQ13936 2221 aa25.75■■□□□ 1.71
CTDNEP1-208ENST00000573600 IGKV3D-15A0A087WSY6 115 aa25.74■■□□□ 1.71
CTDNEP1-208ENST00000573600 TMEM269A0A1B0GVZ9 245 aa25.74■■□□□ 1.71
CTDNEP1-208ENST00000573600 ANKRD61A6NGH8 418 aa25.74■■□□□ 1.71
CTDNEP1-208ENST00000573600 TMEM127O75204 238 aa25.74■■□□□ 1.71
CTDNEP1-208ENST00000573600 MMP16P51512 607 aa25.74■■□□□ 1.71
CTDNEP1-208ENST00000573600 RSPO4Q2I0M5 234 aaPredicted RBP25.74■■□□□ 1.71
CTDNEP1-208ENST00000573600 CEP78Q5JTW2 689 aa25.74■■□□□ 1.71
CTDNEP1-208ENST00000573600 ZNF775Q96BV0 537 aaPredicted RBP25.74■■□□□ 1.71
CTDNEP1-208ENST00000573600 LDAHQ9H6V9 325 aa25.74■■□□□ 1.71
CTDNEP1-208ENST00000573600 ZDHHC11Q9H8X9 412 aa25.74■■□□□ 1.71
CTDNEP1-208ENST00000573600 ASH2LQ9UBL3 628 aa25.74■■□□□ 1.71
CTDNEP1-208ENST00000573600 OR52A1Q9UKL2 312 aa25.74■■□□□ 1.71
CTDNEP1-208ENST00000573600 TRBV5-7A0A0A0MS05 114 aa25.74■■□□□ 1.71
CTDNEP1-208ENST00000573600 TRAV17A0A0B4J275 112 aa25.74■■□□□ 1.71
CTDNEP1-208ENST00000573600 IFITM3Q01628 133 aa25.74■■□□□ 1.71
CTDNEP1-208ENST00000573600 ZNF704Q6ZNC4 412 aaPredicted RBP25.74■■□□□ 1.71
CTDNEP1-208ENST00000573600 CFAP77Q6ZQR2 320 aa25.74■■□□□ 1.71
CTDNEP1-208ENST00000573600 OR10S1Q8NGN2 331 aa25.74■■□□□ 1.71
CTDNEP1-208ENST00000573600 TCF7L1Q9HCS4 588 aa25.74■■□□□ 1.71
CTDNEP1-208ENST00000573600 G6PC2Q9NQR9 355 aa25.74■■□□□ 1.71
CTDNEP1-208ENST00000573600 DAPK2Q9UIK4 370 aa25.74■■□□□ 1.71
CTDNEP1-208ENST00000573600 ISPDA4D126 451 aa25.73■■□□□ 1.71
CTDNEP1-208ENST00000573600 ITGB2P05107 769 aa25.73■■□□□ 1.71
CTDNEP1-208ENST00000573600 THBS2P35442 1172 aa25.73■■□□□ 1.71
CTDNEP1-208ENST00000573600 SOX2P48431 317 aa25.73■■□□□ 1.71
CTDNEP1-208ENST00000573600 ODF4Q2M2E3 257 aa25.73■■□□□ 1.71
CTDNEP1-208ENST00000573600 RDH10Q8IZV5 341 aa25.73■■□□□ 1.71
CTDNEP1-208ENST00000573600 GPR137CQ8N3F9 429 aa25.73■■□□□ 1.71
CTDNEP1-208ENST00000573600 ABHD3Q8WU67 409 aa25.73■■□□□ 1.71
CTDNEP1-208ENST00000573600 TSEN15Q8WW01 171 aaKnown RBP25.73■■□□□ 1.71
CTDNEP1-208ENST00000573600 CSAG2Q9Y5P2 127 aa25.73■■□□□ 1.71
CTDNEP1-208ENST00000573600 TRGV5A0A0B4J1U4 118 aa25.72■■□□□ 1.71
CTDNEP1-208ENST00000573600 A0A1B0GVG6 124 aa25.72■■□□□ 1.71
CTDNEP1-208ENST00000573600 FABP12A6NFH5 140 aa25.72■■□□□ 1.71
CTDNEP1-208ENST00000573600 TBX1O43435 398 aa25.72■■□□□ 1.71
CTDNEP1-208ENST00000573600 HPGDSO60760 199 aa25.72■■□□□ 1.71
CTDNEP1-208ENST00000573600 ISG15P05161 165 aa25.72■■□□□ 1.71
CTDNEP1-208ENST00000573600 EPXP11678 715 aa25.72■■□□□ 1.71
CTDNEP1-208ENST00000573600 APEX1P27695 318 aaKnown RBP25.72■■□□□ 1.71
CTDNEP1-208ENST00000573600 MAGEB1P43366 347 aa25.72■■□□□ 1.71
CTDNEP1-208ENST00000573600 MRPS34P82930 218 aaKnown RBP25.72■■□□□ 1.71
CTDNEP1-208ENST00000573600 METAP1DQ6UB28 335 aaPredicted RBP25.72■■□□□ 1.71
CTDNEP1-208ENST00000573600 FAM131AQ6UXB0 335 aa25.72■■□□□ 1.71
CTDNEP1-208ENST00000573600 TMEM106AQ96A25 262 aa25.72■■□□□ 1.71
CTDNEP1-208ENST00000573600 NABP1Q96AH0 204 aa25.72■■□□□ 1.71
CTDNEP1-208ENST00000573600 SMAD5Q99717 465 aaKnown RBP25.72■■□□□ 1.71
CTDNEP1-208ENST00000573600 ZNF416Q9BWM5 594 aa25.72■■□□□ 1.71
CTDNEP1-208ENST00000573600 DEFB127Q9H1M4 99 aa25.72■■□□□ 1.71
CTDNEP1-208ENST00000573600 EXO5Q9H790 373 aa25.72■■□□□ 1.71
CTDNEP1-208ENST00000573600 ABCB10Q9NRK6 738 aa25.72■■□□□ 1.71
CTDNEP1-208ENST00000573600 EMC3Q9P0I2 261 aa25.72■■□□□ 1.71
CTDNEP1-208ENST00000573600 ABRACLQ9P1F3 81 aa25.72■■□□□ 1.71
CTDNEP1-208ENST00000573600 KLK13Q9UKR3 277 aa25.72■■□□□ 1.71
CTDNEP1-208ENST00000573600 AK6Q9Y3D8 172 aaKnown RBP25.72■■□□□ 1.71
CTDNEP1-208ENST00000573600 DCDC2BA2VCK2 349 aa25.71■■□□□ 1.71
CTDNEP1-208ENST00000573600 NTF4P34130 210 aa25.71■■□□□ 1.71
CTDNEP1-208ENST00000573600 TAF13Q15543 124 aa25.71■■□□□ 1.71
CTDNEP1-208ENST00000573600 SLC25A35Q3KQZ1 300 aa25.71■■□□□ 1.71
CTDNEP1-208ENST00000573600 RIPPLY2Q5TAB7 128 aa25.71■■□□□ 1.71
CTDNEP1-208ENST00000573600 SNX29P2Q8IUI4 249 aa25.71■■□□□ 1.71
CTDNEP1-208ENST00000573600 OR10AC1Q8NH08 325 aa25.71■■□□□ 1.71
CTDNEP1-208ENST00000573600 CPT1CQ8TCG5 803 aa25.71■■□□□ 1.71
CTDNEP1-208ENST00000573600 LIPGQ9Y5X9 500 aa25.71■■□□□ 1.71
CTDNEP1-208ENST00000573600 FREM2Q5SZK8 3169 aa25.71■■□□□ 1.71
CTDNEP1-208ENST00000573600 GFRA3O60609 400 aa25.71■■□□□ 1.71
CTDNEP1-208ENST00000573600 NPR2P20594 1047 aa25.71■■□□□ 1.71
CTDNEP1-208ENST00000573600 HSD11B1P28845 292 aa25.71■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms