RNA–Protein interactions for RNA: ENST00000567635.5

SF3B3-209, Transcript of splicing factor 3b subunit 3, human

TSL 5

Gene SF3B3, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SF3B3-209	ENST00000567635		H7C1C5	153 aa		5.91	□□□□□ -1.46
SF3B3-209	ENST00000567635	ARPC2	O15144	300 aa		5.91	□□□□□ -1.46
SF3B3-209	ENST00000567635	GSC2	O15499	205 aa		5.91	□□□□□ -1.46
SF3B3-209	ENST00000567635	SLC16A7	O60669	478 aa		5.91	□□□□□ -1.46
SF3B3-209	ENST00000567635	KHDRBS3	O75525	346 aa	Known RBP	5.91	□□□□□ -1.46
SF3B3-209	ENST00000567635	TXNDC12	O95881	172 aa		5.91	□□□□□ -1.46
SF3B3-209	ENST00000567635	IGHV3-13	P01766	116 aa		5.91	□□□□□ -1.46
SF3B3-209	ENST00000567635	SEMG1	P04279	462 aa		5.91	□□□□□ -1.46
SF3B3-209	ENST00000567635	SCG5	P05408	212 aa		5.91	□□□□□ -1.46
SF3B3-209	ENST00000567635	FAM157C	P0CG43	387 aa		5.91	□□□□□ -1.46
SF3B3-209	ENST00000567635	COX5B	P10606	129 aa		5.91	□□□□□ -1.46
SF3B3-209	ENST00000567635	ZNF16	P17020	682 aa	Predicted RBP	5.91	□□□□□ -1.46
SF3B3-209	ENST00000567635	ACHE	P22303	614 aa		5.91	□□□□□ -1.46
SF3B3-209	ENST00000567635	GCH1	P30793	250 aa		5.91	□□□□□ -1.46
SF3B3-209	ENST00000567635	SDHA	P31040	664 aa		5.91	□□□□□ -1.46
SF3B3-209	ENST00000567635	WNT5A	P41221	380 aa		5.91	□□□□□ -1.46
SF3B3-209	ENST00000567635	ARHGDIA	P52565	204 aa		5.91	□□□□□ -1.46
SF3B3-209	ENST00000567635	PPP1CB	P62140	327 aa		5.91	□□□□□ -1.46
SF3B3-209	ENST00000567635	LCN6	P62502	163 aa		5.91	□□□□□ -1.46
SF3B3-209	ENST00000567635	CCL8	P80075	99 aa		5.91	□□□□□ -1.46
SF3B3-209	ENST00000567635	SPIB	Q01892	262 aa		5.91	□□□□□ -1.46
SF3B3-209	ENST00000567635	TEK	Q02763	1124 aa		5.91	□□□□□ -1.46
SF3B3-209	ENST00000567635	KRR1	Q13601	381 aa	Known RBP	5.91	□□□□□ -1.46
SF3B3-209	ENST00000567635	MEST	Q5EB52	335 aa		5.91	□□□□□ -1.46
SF3B3-209	ENST00000567635	FAM120AOS	Q5T036	256 aa		5.91	□□□□□ -1.46
SF3B3-209	ENST00000567635	SMARCD3	Q6STE5	483 aa		5.91	□□□□□ -1.46
SF3B3-209	ENST00000567635	GLB1L2	Q8IW92	636 aa		5.91	□□□□□ -1.46
SF3B3-209	ENST00000567635	ZNF101	Q8IZC7	436 aa		5.91	□□□□□ -1.46
SF3B3-209	ENST00000567635	LINC01356	Q8N9X3	169 aa		5.91	□□□□□ -1.46
SF3B3-209	ENST00000567635	KLF14	Q8TD94	323 aa	Predicted RBP	5.91	□□□□□ -1.46
SF3B3-209	ENST00000567635	YIPF5	Q969M3	257 aa		5.91	□□□□□ -1.46
SF3B3-209	ENST00000567635	RASD2	Q96D21	266 aa		5.91	□□□□□ -1.46
SF3B3-209	ENST00000567635	MARS2	Q96GW9	593 aa	Known RBP	5.91	□□□□□ -1.46
SF3B3-209	ENST00000567635	C4orf45	Q96LM5	186 aa		5.91	□□□□□ -1.46
SF3B3-209	ENST00000567635	SNX18	Q96RF0	628 aa		5.91	□□□□□ -1.46
SF3B3-209	ENST00000567635	BTBD10	Q9BSF8	475 aa		5.91	□□□□□ -1.46
SF3B3-209	ENST00000567635	C1orf21	Q9H246	121 aa		5.91	□□□□□ -1.46
SF3B3-209	ENST00000567635	RERGL	Q9H628	205 aa		5.91	□□□□□ -1.46
SF3B3-209	ENST00000567635	EMC7	Q9NPA0	242 aa		5.91	□□□□□ -1.46
SF3B3-209	ENST00000567635	IL1RAP	Q9NPH3	570 aa		5.91	□□□□□ -1.46
SF3B3-209	ENST00000567635	DECR2	Q9NUI1	292 aa		5.91	□□□□□ -1.46
SF3B3-209	ENST00000567635	TAS2R1	Q9NYW7	299 aa		5.91	□□□□□ -1.46
SF3B3-209	ENST00000567635	IL20RA	Q9UHF4	553 aa		5.91	□□□□□ -1.46
SF3B3-209	ENST00000567635	TMCC3	Q9ULS5	477 aa		5.91	□□□□□ -1.46
SF3B3-209	ENST00000567635	KCNS2	Q9ULS6	477 aa		5.91	□□□□□ -1.46
SF3B3-209	ENST00000567635		V9GYQ6	96 aa		5.91	□□□□□ -1.46
SF3B3-209	ENST00000567635	TEX13C	A0A0J9YWL9	993 aa		5.9	□□□□□ -1.46
SF3B3-209	ENST00000567635	PLSCR5	A0PG75	271 aa		5.9	□□□□□ -1.46
SF3B3-209	ENST00000567635		H3BSA7	217 aa		5.9	□□□□□ -1.46
SF3B3-209	ENST00000567635	SOCS2	O14508	198 aa		5.9	□□□□□ -1.46
SF3B3-209	ENST00000567635	IMPA2	O14732	288 aa		5.9	□□□□□ -1.46
SF3B3-209	ENST00000567635	GYG2	O15488	501 aa		5.9	□□□□□ -1.46
SF3B3-209	ENST00000567635	TPD52L2	O43399	206 aa	Known RBP	5.9	□□□□□ -1.46
SF3B3-209	ENST00000567635	PPIH	O43447	177 aa	Known RBP	5.9	□□□□□ -1.46
SF3B3-209	ENST00000567635	SGCE	O43556	437 aa		5.9	□□□□□ -1.46
SF3B3-209	ENST00000567635	IDH3B	O43837	385 aa		5.9	□□□□□ -1.46
SF3B3-209	ENST00000567635	ICMT	O60725	284 aa		5.9	□□□□□ -1.46
SF3B3-209	ENST00000567635	KRT36	O76013	467 aa		5.9	□□□□□ -1.46
SF3B3-209	ENST00000567635	NCR1	O76036	304 aa		5.9	□□□□□ -1.46
SF3B3-209	ENST00000567635	MPZL1	O95297	269 aa		5.9	□□□□□ -1.46
SF3B3-209	ENST00000567635	NGF	P01138	241 aa		5.9	□□□□□ -1.46
SF3B3-209	ENST00000567635	FABP3	P05413	133 aa		5.9	□□□□□ -1.46
SF3B3-209	ENST00000567635	CTLA4	P16410	223 aa		5.9	□□□□□ -1.46
SF3B3-209	ENST00000567635	HNF1A	P20823	631 aa		5.9	□□□□□ -1.46
SF3B3-209	ENST00000567635	TUBG1	P23258	451 aa		5.9	□□□□□ -1.46
SF3B3-209	ENST00000567635	IL2RG	P31785	369 aa		5.9	□□□□□ -1.46
SF3B3-209	ENST00000567635	IFNGR2	P38484	337 aa		5.9	□□□□□ -1.46
SF3B3-209	ENST00000567635	LIPA	P38571	399 aa		5.9	□□□□□ -1.46
SF3B3-209	ENST00000567635	MPV17	P39210	176 aa		5.9	□□□□□ -1.46
SF3B3-209	ENST00000567635	CDKN2A	P42771	156 aa	Known RBP	5.9	□□□□□ -1.46
SF3B3-209	ENST00000567635	CRYBB2	P43320	205 aa		5.9	□□□□□ -1.46
SF3B3-209	ENST00000567635	MAGEB1	P43366	347 aa		5.9	□□□□□ -1.46
SF3B3-209	ENST00000567635	GPR6	P46095	362 aa	Predicted RBP	5.9	□□□□□ -1.46
SF3B3-209	ENST00000567635	ZNF81	P51508	661 aa		5.9	□□□□□ -1.46
SF3B3-209	ENST00000567635	HMGA2	P52926	109 aa		5.9	□□□□□ -1.46
SF3B3-209	ENST00000567635	FXYD6P3	P58550	94 aa		5.9	□□□□□ -1.46
SF3B3-209	ENST00000567635	LSM6	P62312	80 aa	Known RBP	5.9	□□□□□ -1.46
SF3B3-209	ENST00000567635	SCRN3	Q0VDG4	424 aa		5.9	□□□□□ -1.46
SF3B3-209	ENST00000567635	TRIP10	Q15642	601 aa		5.9	□□□□□ -1.46
SF3B3-209	ENST00000567635	KCNMB1	Q16558	191 aa		5.9	□□□□□ -1.46
SF3B3-209	ENST00000567635	RFX4	Q33E94	735 aa		5.9	□□□□□ -1.46
SF3B3-209	ENST00000567635	SPATA46	Q5T0L3	261 aa		5.9	□□□□□ -1.46
SF3B3-209	ENST00000567635	MBNL2	Q5VZF2	373 aa	Known RBP	5.9	□□□□□ -1.46
SF3B3-209	ENST00000567635	RINL	Q6ZS11	566 aa		5.9	□□□□□ -1.46
SF3B3-209	ENST00000567635	VASH1	Q7L8A9	365 aa	Predicted RBP	5.9	□□□□□ -1.46
SF3B3-209	ENST00000567635	ZER1	Q7Z7L7	766 aa		5.9	□□□□□ -1.46
SF3B3-209	ENST00000567635	ADCK1	Q86TW2	530 aa		5.9	□□□□□ -1.46
SF3B3-209	ENST00000567635	ZDHHC21	Q8IVQ6	265 aa		5.9	□□□□□ -1.46
SF3B3-209	ENST00000567635	ABHD4	Q8TB40	342 aa		5.9	□□□□□ -1.46
SF3B3-209	ENST00000567635	SLC25A40	Q8TBP6	338 aa		5.9	□□□□□ -1.46
SF3B3-209	ENST00000567635	GNPDA2	Q8TDQ7	276 aa		5.9	□□□□□ -1.46
SF3B3-209	ENST00000567635	ZFAND2B	Q8WV99	257 aa		5.9	□□□□□ -1.46
SF3B3-209	ENST00000567635	C1orf159	Q96HA4	380 aa		5.9	□□□□□ -1.46
SF3B3-209	ENST00000567635	ERMAP	Q96PL5	475 aa	Predicted RBP	5.9	□□□□□ -1.46
SF3B3-209	ENST00000567635	RAB3IP	Q96QF0	476 aa	Predicted RBP	5.9	□□□□□ -1.46
SF3B3-209	ENST00000567635	GPX7	Q96SL4	187 aa	Predicted RBP	5.9	□□□□□ -1.46
SF3B3-209	ENST00000567635	GPA33	Q99795	319 aa		5.9	□□□□□ -1.46
SF3B3-209	ENST00000567635	SOX7	Q9BT81	388 aa		5.9	□□□□□ -1.46
SF3B3-209	ENST00000567635	OR2J1	Q9GZK6	312 aa		5.9	□□□□□ -1.46
SF3B3-209	ENST00000567635	NUAK2	Q9H093	628 aa		5.9	□□□□□ -1.46

Retrieved 100 of 20,778 RNA–protein pairs in 165.1 ms