RNA–Protein interactions for RNA: ENST00000561673.1

CLK3-205, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 639 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-205ENST00000561673 SLC16A7O60669 478 aa8.75□□□□□ -1.01
CLK3-205ENST00000561673 GMNNO75496 209 aa8.75□□□□□ -1.01
CLK3-205ENST00000561673 NDUFB2O95178 105 aa8.75□□□□□ -1.01
CLK3-205ENST00000561673 MPZL1O95297 269 aa8.75□□□□□ -1.01
CLK3-205ENST00000561673 IGHV1-46P01743 117 aa8.75□□□□□ -1.01
CLK3-205ENST00000561673 TFP02787 698 aa8.75□□□□□ -1.01
CLK3-205ENST00000561673 SDHAP31040 664 aa8.75□□□□□ -1.01
CLK3-205ENST00000561673 MSX2P35548 267 aaPredicted RBP8.75□□□□□ -1.01
CLK3-205ENST00000561673 ARHGDIAP52565 204 aa8.75□□□□□ -1.01
CLK3-205ENST00000561673 GYS2P54840 703 aa8.75□□□□□ -1.01
CLK3-205ENST00000561673 TEKQ02763 1124 aa8.75□□□□□ -1.01
CLK3-205ENST00000561673 MVKQ03426 396 aa8.75□□□□□ -1.01
CLK3-205ENST00000561673 KRR1Q13601 381 aaKnown RBP8.75□□□□□ -1.01
CLK3-205ENST00000561673 KRT72Q14CN4 511 aa8.75□□□□□ -1.01
CLK3-205ENST00000561673 KRTAP24-1Q3LI83 254 aa8.75□□□□□ -1.01
CLK3-205ENST00000561673 OTPQ5XKR4 325 aa8.75□□□□□ -1.01
CLK3-205ENST00000561673 USP51Q70EK9 711 aa8.75□□□□□ -1.01
CLK3-205ENST00000561673 KCTD12Q96CX2 325 aaKnown RBP8.75□□□□□ -1.01
CLK3-205ENST00000561673 PYURFQ96I23 114 aa8.75□□□□□ -1.01
CLK3-205ENST00000561673 RSRC1Q96IZ7 334 aaKnown RBP8.75□□□□□ -1.01
CLK3-205ENST00000561673 DHRS1Q96LJ7 313 aa8.75□□□□□ -1.01
CLK3-205ENST00000561673 GPX7Q96SL4 187 aaPredicted RBP8.75□□□□□ -1.01
CLK3-205ENST00000561673 WACQ9BTA9 647 aa8.75□□□□□ -1.01
CLK3-205ENST00000561673 NDEL1Q9GZM8 345 aa8.75□□□□□ -1.01
CLK3-205ENST00000561673 SAP30LQ9HAJ7 183 aa8.75□□□□□ -1.01
CLK3-205ENST00000561673 ELOVL3Q9HB03 270 aa8.75□□□□□ -1.01
CLK3-205ENST00000561673 LPAR2Q9HBW0 351 aa8.75□□□□□ -1.01
CLK3-205ENST00000561673 HIF1ANQ9NWT6 349 aa8.75□□□□□ -1.01
CLK3-205ENST00000561673 VSX1Q9NZR4 365 aaPredicted RBP8.75□□□□□ -1.01
CLK3-205ENST00000561673 CD300AQ9UGN4 299 aa8.75□□□□□ -1.01
CLK3-205ENST00000561673 KLHL21Q9UJP4 597 aa8.75□□□□□ -1.01
CLK3-205ENST00000561673 IER3IP1Q9Y5U9 82 aa8.75□□□□□ -1.01
CLK3-205ENST00000561673 CACNG2Q9Y698 323 aa8.75□□□□□ -1.01
CLK3-205ENST00000561673 V9GYQ6 96 aa8.75□□□□□ -1.01
CLK3-205ENST00000561673 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.74□□□□□ -1.011e-6■■□□□ 12.5
CLK3-205ENST00000561673 PLSCR5A0PG75 271 aa8.74□□□□□ -1.01
CLK3-205ENST00000561673 UNC119BA6NIH7 251 aa8.74□□□□□ -1.01
CLK3-205ENST00000561673 ZSCAN5BA6NJL1 495 aa8.74□□□□□ -1.01
CLK3-205ENST00000561673 H3BSA7 217 aa8.74□□□□□ -1.01
CLK3-205ENST00000561673 SOCS2O14508 198 aa8.74□□□□□ -1.01
CLK3-205ENST00000561673 DOK2O60496 412 aa8.74□□□□□ -1.01
CLK3-205ENST00000561673 ABHD16AO95870 558 aa8.74□□□□□ -1.01
CLK3-205ENST00000561673 SEMG1P04279 462 aa8.74□□□□□ -1.01
CLK3-205ENST00000561673 MSMBP08118 114 aa8.74□□□□□ -1.01
CLK3-205ENST00000561673 COX5BP10606 129 aa8.74□□□□□ -1.01
CLK3-205ENST00000561673 HSD17B1P14061 328 aa8.74□□□□□ -1.01
CLK3-205ENST00000561673 ITGA2P17301 1181 aa8.74□□□□□ -1.01
CLK3-205ENST00000561673 SRP14P37108 136 aaKnown RBP8.74□□□□□ -1.01
CLK3-205ENST00000561673 CDKN2AP42771 156 aaKnown RBP8.74□□□□□ -1.01
CLK3-205ENST00000561673 HTR5AP47898 357 aa8.74□□□□□ -1.01
CLK3-205ENST00000561673 PSG7Q13046 419 aa8.74□□□□□ -1.01
CLK3-205ENST00000561673 HFEQ30201 348 aa8.74□□□□□ -1.01
CLK3-205ENST00000561673 FAM209AQ5JX71 171 aa8.74□□□□□ -1.01
CLK3-205ENST00000561673 AVPI1Q5T686 147 aa8.74□□□□□ -1.01
CLK3-205ENST00000561673 GPR139Q6DWJ6 353 aa8.74□□□□□ -1.01
CLK3-205ENST00000561673 ARL9Q6T311 187 aa8.74□□□□□ -1.01
CLK3-205ENST00000561673 DPY19L2P2Q6ZN68 376 aa8.74□□□□□ -1.01
CLK3-205ENST00000561673 RINLQ6ZS11 566 aa8.74□□□□□ -1.01
CLK3-205ENST00000561673 PTCHD4Q6ZW05 846 aa8.74□□□□□ -1.01
CLK3-205ENST00000561673 VASH1Q7L8A9 365 aaPredicted RBP8.74□□□□□ -1.01
CLK3-205ENST00000561673 ZER1Q7Z7L7 766 aa8.74□□□□□ -1.01
CLK3-205ENST00000561673 GLCCI1Q86VQ1 547 aa8.74□□□□□ -1.01
CLK3-205ENST00000561673 GLB1L2Q8IW92 636 aa8.74□□□□□ -1.01
CLK3-205ENST00000561673 TMEM186Q96B77 213 aa8.74□□□□□ -1.01
CLK3-205ENST00000561673 CDRT15Q96T59 188 aa8.74□□□□□ -1.01
CLK3-205ENST00000561673 NUAK2Q9H093 628 aa8.74□□□□□ -1.01
CLK3-205ENST00000561673 NSRP1Q9H0G5 558 aaKnown RBP8.74□□□□□ -1.01
CLK3-205ENST00000561673 SYT4Q9H2B2 425 aa8.74□□□□□ -1.01
CLK3-205ENST00000561673 POFUT1Q9H488 388 aa8.74□□□□□ -1.01
CLK3-205ENST00000561673 RERGLQ9H628 205 aa8.74□□□□□ -1.01
CLK3-205ENST00000561673 MSL2Q9HCI7 577 aa8.74□□□□□ -1.01
CLK3-205ENST00000561673 CYSLTR2Q9NS75 346 aa8.74□□□□□ -1.01
CLK3-205ENST00000561673 ARL8BQ9NVJ2 186 aa8.74□□□□□ -1.01
CLK3-205ENST00000561673 TBCCD1Q9NVR7 557 aa8.74□□□□□ -1.01
CLK3-205ENST00000561673 NDRG4Q9ULP0 352 aaKnown RBP8.74□□□□□ -1.01
CLK3-205ENST00000561673 AURKCQ9UQB9 309 aa8.74□□□□□ -1.01
CLK3-205ENST00000561673 COA3Q9Y2R0 106 aaPredicted RBP8.74□□□□□ -1.01
CLK3-205ENST00000561673 CLDN25C9JDP6 229 aa8.73□□□□□ -1.01
CLK3-205ENST00000561673 SGCEO43556 437 aa8.73□□□□□ -1.01
CLK3-205ENST00000561673 KHDRBS3O75525 346 aaKnown RBP8.73□□□□□ -1.01
CLK3-205ENST00000561673 UBOX5O94941 541 aa8.73□□□□□ -1.01
CLK3-205ENST00000561673 GPANK1O95872 356 aa8.73□□□□□ -1.01
CLK3-205ENST00000561673 TXNDC12O95881 172 aa8.73□□□□□ -1.01
CLK3-205ENST00000561673 PCMT1P22061 227 aa8.73□□□□□ -1.01
CLK3-205ENST00000561673 LIPAP38571 399 aa8.73□□□□□ -1.01
CLK3-205ENST00000561673 RPS6KA3P51812 740 aa8.73□□□□□ -1.01
CLK3-205ENST00000561673 SMIM11AP58511 58 aa8.73□□□□□ -1.01
CLK3-205ENST00000561673 LSM6P62312 80 aaKnown RBP8.73□□□□□ -1.01
CLK3-205ENST00000561673 SCRN3Q0VDG4 424 aa8.73□□□□□ -1.01
CLK3-205ENST00000561673 AQP6Q13520 282 aa8.73□□□□□ -1.01
CLK3-205ENST00000561673 SPRNQ5BIV9 151 aa8.73□□□□□ -1.01
CLK3-205ENST00000561673 MTX3Q5HYI7 312 aa8.73□□□□□ -1.01
CLK3-205ENST00000561673 SAMD4BQ5PRF9 694 aaKnown RBP8.73□□□□□ -1.01
CLK3-205ENST00000561673 SMARCD3Q6STE5 483 aa8.73□□□□□ -1.01
CLK3-205ENST00000561673 PIGWQ7Z7B1 504 aa8.73□□□□□ -1.01
CLK3-205ENST00000561673 ADCK1Q86TW2 530 aa8.73□□□□□ -1.01
CLK3-205ENST00000561673 PGAM4Q8N0Y7 254 aa8.73□□□□□ -1.01
CLK3-205ENST00000561673 OR51F2Q8NH61 342 aa8.73□□□□□ -1.01
CLK3-205ENST00000561673 SLC7A6Q92536 515 aa8.73□□□□□ -1.01
CLK3-205ENST00000561673 CCL17Q92583 94 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms