RNA–Protein interactions for RNA: ENST00000561242.1

TPM1-229, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-229ENST00000561242 RAB1BQ9H0U4 201 aa9.32□□□□□ -0.92
TPM1-229ENST00000561242 OR51B6Q9H340 312 aa9.32□□□□□ -0.92
TPM1-229ENST00000561242 Q9H521 79 aa9.32□□□□□ -0.92
TPM1-229ENST00000561242 BARX1Q9HBU1 254 aaPredicted RBP9.32□□□□□ -0.92
TPM1-229ENST00000561242 SLCO1C1Q9NYB5 712 aa9.32□□□□□ -0.92
TPM1-229ENST00000561242 CRNNQ9UBG3 495 aaPredicted RBP9.32□□□□□ -0.92
TPM1-229ENST00000561242 LAMP3Q9UQV4 416 aa9.32□□□□□ -0.92
TPM1-229ENST00000561242 NBEAQ8NFP9 2946 aa9.32□□□□□ -0.92
TPM1-229ENST00000561242 NBASA2RRP1 2371 aa9.31□□□□□ -0.92
TPM1-229ENST00000561242 PHF3Q92576 2039 aaKnown RBP9.31□□□□□ -0.92
TPM1-229ENST00000561242 FREM3P0C091 2139 aa9.31□□□□□ -0.92
TPM1-229ENST00000561242 LOC100130705A0A1B0GUX0 176 aa9.31□□□□□ -0.92
TPM1-229ENST00000561242 IRGMA1A4Y4 181 aa9.31□□□□□ -0.92
TPM1-229ENST00000561242 ZAR1LA6NP61 321 aa9.31□□□□□ -0.92
TPM1-229ENST00000561242 B9A039 149 aa9.31□□□□□ -0.92
TPM1-229ENST00000561242 ATP6V1G2-DDX39BF2Z307 99 aa9.31□□□□□ -0.92
TPM1-229ENST00000561242 ATE1O95260 518 aa9.31□□□□□ -0.92
TPM1-229ENST00000561242 LYNP07948 512 aa9.31□□□□□ -0.92
TPM1-229ENST00000561242 FAM157BP0CG42 384 aa9.31□□□□□ -0.92
TPM1-229ENST00000561242 SELEP16581 610 aa9.31□□□□□ -0.92
TPM1-229ENST00000561242 ZNF26P17031 533 aaPredicted RBP9.31□□□□□ -0.92
TPM1-229ENST00000561242 TNFSF4P23510 183 aa9.31□□□□□ -0.92
TPM1-229ENST00000561242 UCP2P55851 309 aa9.31□□□□□ -0.92
TPM1-229ENST00000561242 FXYD6P3P58550 94 aa9.31□□□□□ -0.92
TPM1-229ENST00000561242 PSG4Q00888 419 aa9.31□□□□□ -0.92
TPM1-229ENST00000561242 KCNMB1Q16558 191 aa9.31□□□□□ -0.92
TPM1-229ENST00000561242 ZNF774Q6NX45 483 aa9.31□□□□□ -0.92
TPM1-229ENST00000561242 MEPCEQ7L2J0 689 aaKnown RBP9.31□□□□□ -0.92
TPM1-229ENST00000561242 FAM220AQ7Z4H9 259 aa9.31□□□□□ -0.92
TPM1-229ENST00000561242 DCXRQ7Z4W1 244 aa9.31□□□□□ -0.92
TPM1-229ENST00000561242 ACBD4Q8NC06 268 aa9.31□□□□□ -0.92
TPM1-229ENST00000561242 KBTBD8Q8NFY9 601 aa9.31□□□□□ -0.92
TPM1-229ENST00000561242 ABHD4Q8TB40 342 aa9.31□□□□□ -0.92
TPM1-229ENST00000561242 SYNPRQ8TBG9 265 aa9.31□□□□□ -0.92
TPM1-229ENST00000561242 ZMYND19Q96E35 227 aaPredicted RBP9.31□□□□□ -0.92
TPM1-229ENST00000561242 CNN2Q99439 309 aaKnown RBP9.31□□□□□ -0.92
TPM1-229ENST00000561242 ATF6BQ99941 703 aa9.31□□□□□ -0.92
TPM1-229ENST00000561242 ADI1Q9BV57 179 aa9.31□□□□□ -0.92
TPM1-229ENST00000561242 MROQ9BYG7 248 aa9.31□□□□□ -0.92
TPM1-229ENST00000561242 TOR3AQ9H497 397 aa9.31□□□□□ -0.92
TPM1-229ENST00000561242 MED20Q9H944 212 aa9.31□□□□□ -0.92
TPM1-229ENST00000561242 CA10Q9NS85 328 aa9.31□□□□□ -0.92
TPM1-229ENST00000561242 CBLN4Q9NTU7 201 aa9.31□□□□□ -0.92
TPM1-229ENST00000561242 BEX4Q9NWD9 120 aaPredicted RBP9.31□□□□□ -0.92
TPM1-229ENST00000561242 B3GNT2Q9NY97 397 aa9.31□□□□□ -0.92
TPM1-229ENST00000561242 WARS2Q9UGM6 360 aaKnown RBP9.31□□□□□ -0.92
TPM1-229ENST00000561242 GDF2Q9UK05 429 aaPredicted RBP9.31□□□□□ -0.92
TPM1-229ENST00000561242 IKZF2Q9UKS7 526 aa9.31□□□□□ -0.92
TPM1-229ENST00000561242 PLEKHA6Q9Y2H5 1048 aa9.31□□□□□ -0.92
TPM1-229ENST00000561242 UGT2A1Q9Y4X1 527 aa9.31□□□□□ -0.92
TPM1-229ENST00000561242 IGLV1-36A0A0B4J1U3 117 aa9.3□□□□□ -0.92
TPM1-229ENST00000561242 IGHV2OR16-5A0A0B4J2B6 119 aa9.3□□□□□ -0.92
TPM1-229ENST00000561242 RER1O15258 196 aa9.3□□□□□ -0.92
TPM1-229ENST00000561242 MPZL1O95297 269 aa9.3□□□□□ -0.92
TPM1-229ENST00000561242 IGLV1-44P01699 117 aa9.3□□□□□ -0.92
TPM1-229ENST00000561242 LCATP04180 440 aa9.3□□□□□ -0.92
TPM1-229ENST00000561242 ALPLP05186 524 aa9.3□□□□□ -0.92
TPM1-229ENST00000561242 TACSTD2P09758 323 aa9.3□□□□□ -0.92
TPM1-229ENST00000561242 OR4A8P0C604 315 aa9.3□□□□□ -0.92
TPM1-229ENST00000561242 NR4A1P22736 598 aa9.3□□□□□ -0.92
TPM1-229ENST00000561242 PCSK6P29122 969 aa9.3□□□□□ -0.92
TPM1-229ENST00000561242 TTKP33981 857 aa9.3□□□□□ -0.92
TPM1-229ENST00000561242 GLRXP35754 106 aa9.3□□□□□ -0.92
TPM1-229ENST00000561242 GGT2P36268 569 aa9.3□□□□□ -0.92
TPM1-229ENST00000561242 LIPAP38571 399 aa9.3□□□□□ -0.92
TPM1-229ENST00000561242 HSPA13P48723 471 aa9.3□□□□□ -0.92
TPM1-229ENST00000561242 KLF3P57682 345 aaPredicted RBP9.3□□□□□ -0.92
TPM1-229ENST00000561242 PPP2R2BQ00005 443 aa9.3□□□□□ -0.92
TPM1-229ENST00000561242 TMED1Q13445 227 aa9.3□□□□□ -0.92
TPM1-229ENST00000561242 SNCBQ16143 134 aa9.3□□□□□ -0.92
TPM1-229ENST00000561242 MEP1BQ16820 701 aa9.3□□□□□ -0.92
TPM1-229ENST00000561242 NXNL2Q5VZ03 156 aa9.3□□□□□ -0.92
TPM1-229ENST00000561242 SLC16A9Q7RTY1 509 aa9.3□□□□□ -0.92
TPM1-229ENST00000561242 COMMD2Q86X83 199 aa9.3□□□□□ -0.92
TPM1-229ENST00000561242 LINC00346Q8IVM7 164 aa9.3□□□□□ -0.92
TPM1-229ENST00000561242 ZNF511Q8NB15 262 aa9.3□□□□□ -0.92
TPM1-229ENST00000561242 CPEB3Q8NE35 698 aaKnown RBP9.3□□□□□ -0.92
TPM1-229ENST00000561242 NUP37Q8NFH4 326 aa9.3□□□□□ -0.92
TPM1-229ENST00000561242 SLC26A10Q8NG04 563 aa9.3□□□□□ -0.92
TPM1-229ENST00000561242 HTRA1Q92743 480 aa9.3□□□□□ -0.92
TPM1-229ENST00000561242 APOBEC3DQ96AK3 386 aaPredicted RBP9.3□□□□□ -0.92
TPM1-229ENST00000561242 TEAD3Q99594 435 aa9.3□□□□□ -0.92
TPM1-229ENST00000561242 COQ7Q99807 217 aa9.3□□□□□ -0.92
TPM1-229ENST00000561242 GABARAPL3Q9BY60 117 aa9.3□□□□□ -0.92
TPM1-229ENST00000561242 YIPF3Q9GZM5 350 aa9.3□□□□□ -0.92
TPM1-229ENST00000561242 MS4A5Q9H3V2 200 aa9.3□□□□□ -0.92
TPM1-229ENST00000561242 NIPAL2Q9H841 368 aa9.3□□□□□ -0.92
TPM1-229ENST00000561242 WDR76Q9H967 626 aa9.3□□□□□ -0.92
TPM1-229ENST00000561242 RNPEPL1Q9HAU8 725 aa9.3□□□□□ -0.92
TPM1-229ENST00000561242 NOX3Q9HBY0 568 aa9.3□□□□□ -0.92
TPM1-229ENST00000561242 CYSLTR2Q9NS75 346 aa9.3□□□□□ -0.92
TPM1-229ENST00000561242 DECR2Q9NUI1 292 aa9.3□□□□□ -0.92
TPM1-229ENST00000561242 NPAP1Q9NZP6 1156 aa9.3□□□□□ -0.92
TPM1-229ENST00000561242 ST6GALNAC2Q9UJ37 374 aa9.3□□□□□ -0.92
TPM1-229ENST00000561242 GTF2A1LQ9UNN4 478 aa9.3□□□□□ -0.92
TPM1-229ENST00000561242 NOP16Q9Y3C1 178 aaKnown RBP9.3□□□□□ -0.92
TPM1-229ENST00000561242 RPL36Q9Y3U8 105 aaKnown RBP9.3□□□□□ -0.92
TPM1-229ENST00000561242 MED12Q93074 2177 aa9.3□□□□□ -0.92
TPM1-229ENST00000561242 IGKV1D-43A0A0B4J1Z2 117 aa9.29□□□□□ -0.92
TPM1-229ENST00000561242 ZNF878C9JN71 531 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms