RNA–Protein interactions for RNA: ENST00000560433.5

SNRPA1-211, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 2,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-211ENST00000560433 TLX3O43711 291 aaPredicted RBP9.62□□□□□ -0.87
SNRPA1-211ENST00000560433 GFRA3O60609 400 aa9.62□□□□□ -0.87
SNRPA1-211ENST00000560433 LMX1BO60663 402 aa9.62□□□□□ -0.87
SNRPA1-211ENST00000560433 ZNF432O94892 652 aa9.62□□□□□ -0.87
SNRPA1-211ENST00000560433 GLSO94925 669 aaPredicted RBP9.62□□□□□ -0.87
SNRPA1-211ENST00000560433 VAMP5O95183 116 aa9.62□□□□□ -0.87
SNRPA1-211ENST00000560433 H2BFMP0C1H6 154 aa9.62□□□□□ -0.87
SNRPA1-211ENST00000560433 PATE4P0C8F1 98 aa9.62□□□□□ -0.87
SNRPA1-211ENST00000560433 RAB3BP20337 219 aa9.62□□□□□ -0.87
SNRPA1-211ENST00000560433 PPP5CP53041 499 aa9.62□□□□□ -0.87
SNRPA1-211ENST00000560433 SOX8P57073 446 aa9.62□□□□□ -0.87
SNRPA1-211ENST00000560433 GALK2Q01415 458 aa9.62□□□□□ -0.87
SNRPA1-211ENST00000560433 SLC10A1Q14973 349 aa9.62□□□□□ -0.87
SNRPA1-211ENST00000560433 LINGO2Q7L985 606 aa9.62□□□□□ -0.87
SNRPA1-211ENST00000560433 HIST2H2ABQ8IUE6 130 aaPredicted RBP9.62□□□□□ -0.87
SNRPA1-211ENST00000560433 RNF128Q8TEB7 428 aa9.62□□□□□ -0.87
SNRPA1-211ENST00000560433 ASB17Q8WXJ9 295 aa9.62□□□□□ -0.87
SNRPA1-211ENST00000560433 SLC7A6Q92536 515 aa9.62□□□□□ -0.87
SNRPA1-211ENST00000560433 ABTB1Q969K4 478 aaPredicted RBP9.62□□□□□ -0.87
SNRPA1-211ENST00000560433 TMEM106AQ96A25 262 aa9.62□□□□□ -0.87
SNRPA1-211ENST00000560433 DERL3Q96Q80 235 aa9.62□□□□□ -0.87
SNRPA1-211ENST00000560433 SDHCQ99643 169 aaPredicted RBP9.62□□□□□ -0.87
SNRPA1-211ENST00000560433 GFI1Q99684 422 aa9.62□□□□□ -0.87
SNRPA1-211ENST00000560433 SCNM1Q9BWG6 230 aa9.62□□□□□ -0.87
SNRPA1-211ENST00000560433 ULBP2Q9BZM5 246 aa9.62□□□□□ -0.87
SNRPA1-211ENST00000560433 CRLF2Q9HC73 371 aa9.62□□□□□ -0.87
SNRPA1-211ENST00000560433 UGT2A1Q9Y4X1 527 aa9.62□□□□□ -0.87
SNRPA1-211ENST00000560433 KCNMB2Q9Y691 235 aa9.62□□□□□ -0.87
SNRPA1-211ENST00000560433 A3GALT2U3KPV4 340 aa9.62□□□□□ -0.87
SNRPA1-211ENST00000560433 ZZEF1O43149 2961 aa9.61□□□□□ -0.87
SNRPA1-211ENST00000560433 TRAV8-7A0A075B6U6 113 aa9.61□□□□□ -0.87
SNRPA1-211ENST00000560433 TMEM269A0A1B0GVZ9 245 aa9.61□□□□□ -0.87
SNRPA1-211ENST00000560433 SERPINA3P01011 423 aa9.61□□□□□ -0.87
SNRPA1-211ENST00000560433 UCHL1P09936 223 aa9.61□□□□□ -0.87
SNRPA1-211ENST00000560433 SNRPBP14678 240 aaKnown RBP9.61□□□□□ -0.87
SNRPA1-211ENST00000560433 TRAM1Q15629 374 aa9.61□□□□□ -0.87
SNRPA1-211ENST00000560433 ZNF79Q15937 498 aa9.61□□□□□ -0.87
SNRPA1-211ENST00000560433 YIF1BQ5BJH7 314 aa9.61□□□□□ -0.87
SNRPA1-211ENST00000560433 CEP78Q5JTW2 689 aa9.61□□□□□ -0.87
SNRPA1-211ENST00000560433 HES5Q5TA89 166 aa9.61□□□□□ -0.87
SNRPA1-211ENST00000560433 IGF2-ASQ6U949 168 aa9.61□□□□□ -0.87
SNRPA1-211ENST00000560433 FAM131AQ6UXB0 335 aa9.61□□□□□ -0.87
SNRPA1-211ENST00000560433 NAA40Q86UY6 237 aa9.61□□□□□ -0.87
SNRPA1-211ENST00000560433 RPS4Y2Q8TD47 263 aa9.61□□□□□ -0.87
SNRPA1-211ENST00000560433 TSEN15Q8WW01 171 aaKnown RBP9.61□□□□□ -0.87
SNRPA1-211ENST00000560433 MNTQ99583 582 aa9.61□□□□□ -0.87
SNRPA1-211ENST00000560433 SH3GL3Q99963 347 aa9.61□□□□□ -0.87
SNRPA1-211ENST00000560433 COMMD4Q9H0A8 199 aa9.61□□□□□ -0.87
SNRPA1-211ENST00000560433 LUZP4Q9P127 313 aa9.61□□□□□ -0.87
SNRPA1-211ENST00000560433 MRPS18CQ9Y3D5 142 aaKnown RBP9.61□□□□□ -0.87
SNRPA1-211ENST00000560433 V9GYH0 126 aa9.61□□□□□ -0.87
SNRPA1-211ENST00000560433 TMCC2O75069 709 aa9.61□□□□□ -0.87
SNRPA1-211ENST00000560433 ATF1P18846 271 aa9.61□□□□□ -0.87
SNRPA1-211ENST00000560433 CD53P19397 219 aa9.61□□□□□ -0.87
SNRPA1-211ENST00000560433 GALP22466 123 aa9.61□□□□□ -0.87
SNRPA1-211ENST00000560433 CAPZA2P47755 286 aa9.61□□□□□ -0.87
SNRPA1-211ENST00000560433 ROM1Q03395 351 aa9.61□□□□□ -0.87
SNRPA1-211ENST00000560433 P2RY14Q15391 338 aa9.61□□□□□ -0.87
SNRPA1-211ENST00000560433 PCK2Q16822 640 aa9.61□□□□□ -0.87
SNRPA1-211ENST00000560433 Q499Y3 187 aa9.61□□□□□ -0.87
SNRPA1-211ENST00000560433 DMRTC1Q5HYR2 192 aa9.61□□□□□ -0.87
SNRPA1-211ENST00000560433 TEX30Q5JUR7 227 aa9.61□□□□□ -0.87
SNRPA1-211ENST00000560433 DDI2Q5TDH0 399 aa9.61□□□□□ -0.87
SNRPA1-211ENST00000560433 STEAP3Q658P3 488 aa9.61□□□□□ -0.87
SNRPA1-211ENST00000560433 AAED1Q7RTV5 226 aa9.61□□□□□ -0.87
SNRPA1-211ENST00000560433 TUSC5Q8IXB3 177 aa9.61□□□□□ -0.87
SNRPA1-211ENST00000560433 ZFP62Q8NB50 900 aaPredicted RBP9.61□□□□□ -0.87
SNRPA1-211ENST00000560433 IL17RDQ8NFM7 739 aa9.61□□□□□ -0.87
SNRPA1-211ENST00000560433 OR5H6Q8NGV6 325 aa9.61□□□□□ -0.87
SNRPA1-211ENST00000560433 OR2AJ1Q8NGZ0 328 aa9.61□□□□□ -0.87
SNRPA1-211ENST00000560433 FAM122AQ96E09 287 aa9.61□□□□□ -0.87
SNRPA1-211ENST00000560433 SOX7Q9BT81 388 aa9.61□□□□□ -0.87
SNRPA1-211ENST00000560433 C1orf198Q9H425 327 aa9.61□□□□□ -0.87
SNRPA1-211ENST00000560433 CALHM2Q9HA72 323 aa9.61□□□□□ -0.87
SNRPA1-211ENST00000560433 SPRR3Q9UBC9 169 aa9.61□□□□□ -0.87
SNRPA1-211ENST00000560433 FOXD3Q9UJU5 478 aaPredicted RBP9.61□□□□□ -0.87
SNRPA1-211ENST00000560433 SLC5A6Q9Y289 635 aa9.61□□□□□ -0.87
SNRPA1-211ENST00000560433 K7EM74 188 aa9.6□□□□□ -0.87
SNRPA1-211ENST00000560433 P2RY10O00398 339 aa9.6□□□□□ -0.87
SNRPA1-211ENST00000560433 DHHO43323 396 aa9.6□□□□□ -0.87
SNRPA1-211ENST00000560433 GPRIN2O60269 458 aa9.6□□□□□ -0.87
SNRPA1-211ENST00000560433 B4GALT1P15291 398 aa9.6□□□□□ -0.87
SNRPA1-211ENST00000560433 ZNF708P17019 499 aa9.6□□□□□ -0.87
SNRPA1-211ENST00000560433 THBS2P35442 1172 aa9.6□□□□□ -0.87
SNRPA1-211ENST00000560433 POU4F3Q15319 338 aa9.6□□□□□ -0.87
SNRPA1-211ENST00000560433 BAK1Q16611 211 aa9.6□□□□□ -0.87
SNRPA1-211ENST00000560433 GFOD2Q3B7J2 385 aa9.6□□□□□ -0.87
SNRPA1-211ENST00000560433 UNQ9370/PRO34162Q6UXP9 181 aa9.6□□□□□ -0.87
SNRPA1-211ENST00000560433 SLC22A16Q86VW1 577 aa9.6□□□□□ -0.87
SNRPA1-211ENST00000560433 CROCCP3Q8IVE0 287 aa9.6□□□□□ -0.87
SNRPA1-211ENST00000560433 OR8H2Q8N162 312 aa9.6□□□□□ -0.87
SNRPA1-211ENST00000560433 RNF133Q8WVZ7 376 aa9.6□□□□□ -0.87
SNRPA1-211ENST00000560433 TMEM54Q969K7 222 aa9.6□□□□□ -0.87
SNRPA1-211ENST00000560433 CPNE4Q96A23 557 aaPredicted RBP9.6□□□□□ -0.87
SNRPA1-211ENST00000560433 SCMH1Q96GD3 660 aa9.6□□□□□ -0.87
SNRPA1-211ENST00000560433 MFRPQ9BY79 579 aa9.6□□□□□ -0.87
SNRPA1-211ENST00000560433 PRRG4Q9BZD6 226 aa9.6□□□□□ -0.87
SNRPA1-211ENST00000560433 C5orf63A6NC05 138 aa9.6□□□□□ -0.87
SNRPA1-211ENST00000560433 FABP12A6NFH5 140 aa9.6□□□□□ -0.87
SNRPA1-211ENST00000560433 ZNF891A8MT65 544 aaPredicted RBP9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms