RNA–Protein interactions for RNA: ENST00000558324.1

HERC1-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 828 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-202ENST00000558324 GADD45GO95257 159 aa10.15□□□□□ -0.78
HERC1-202ENST00000558324 PPP1R3DO95685 299 aa10.15□□□□□ -0.78
HERC1-202ENST00000558324 IGHV1-46P01743 117 aa10.15□□□□□ -0.78
HERC1-202ENST00000558324 SEMG1P04279 462 aa10.15□□□□□ -0.78
HERC1-202ENST00000558324 ITGA2P17301 1181 aa10.15□□□□□ -0.78
HERC1-202ENST00000558324 SRP14P37108 136 aaKnown RBP10.15□□□□□ -0.78
HERC1-202ENST00000558324 ARHGDIAP52565 204 aa10.15□□□□□ -0.78
HERC1-202ENST00000558324 TMEM33P57088 247 aa10.15□□□□□ -0.78
HERC1-202ENST00000558324 FXYD6P3P58550 94 aa10.15□□□□□ -0.78
HERC1-202ENST00000558324 MRPS11P82912 194 aaKnown RBP10.15□□□□□ -0.78
HERC1-202ENST00000558324 DBPQ10586 325 aaPredicted RBP10.15□□□□□ -0.78
HERC1-202ENST00000558324 HNRNPA0Q13151 305 aaKnown RBP10.15□□□□□ -0.78
HERC1-202ENST00000558324 SAMD4BQ5PRF9 694 aaKnown RBP10.15□□□□□ -0.78
HERC1-202ENST00000558324 GPR139Q6DWJ6 353 aa10.15□□□□□ -0.78
HERC1-202ENST00000558324 C1orf94Q6P1W5 598 aa10.15□□□□□ -0.78
HERC1-202ENST00000558324 PTCHD4Q6ZW05 846 aa10.15□□□□□ -0.78
HERC1-202ENST00000558324 GLCCI1Q86VQ1 547 aa10.15□□□□□ -0.78
HERC1-202ENST00000558324 SPATA3Q8NHX4 192 aa10.15□□□□□ -0.78
HERC1-202ENST00000558324 SLC7A6Q92536 515 aa10.15□□□□□ -0.78
HERC1-202ENST00000558324 MCUR1Q96AQ8 359 aa10.15□□□□□ -0.78
HERC1-202ENST00000558324 PYURFQ96I23 114 aa10.15□□□□□ -0.78
HERC1-202ENST00000558324 DHRS1Q96LJ7 313 aa10.15□□□□□ -0.78
HERC1-202ENST00000558324 NSMCE2Q96MF7 247 aa10.15□□□□□ -0.78
HERC1-202ENST00000558324 LRRC37BQ96QE4 947 aa10.15□□□□□ -0.78
HERC1-202ENST00000558324 CDRT15Q96T59 188 aa10.15□□□□□ -0.78
HERC1-202ENST00000558324 REPIN1Q9BWE0 567 aaKnown RBP10.15□□□□□ -0.78
HERC1-202ENST00000558324 NUAK2Q9H093 628 aa10.15□□□□□ -0.78
HERC1-202ENST00000558324 RACGAP1Q9H0H5 632 aa10.15□□□□□ -0.78
HERC1-202ENST00000558324 POFUT1Q9H488 388 aa10.15□□□□□ -0.78
HERC1-202ENST00000558324 GORASP2Q9H8Y8 452 aa10.15□□□□□ -0.78
HERC1-202ENST00000558324 ELOVL3Q9HB03 270 aa10.15□□□□□ -0.78
HERC1-202ENST00000558324 MSL2Q9HCI7 577 aa10.15□□□□□ -0.78
HERC1-202ENST00000558324 NRIP3Q9NQ35 241 aa10.15□□□□□ -0.78
HERC1-202ENST00000558324 NKIRAS2Q9NYR9 191 aa10.15□□□□□ -0.78
HERC1-202ENST00000558324 PLEK2Q9NYT0 353 aa10.15□□□□□ -0.78
HERC1-202ENST00000558324 ASH2LQ9UBL3 628 aa10.15□□□□□ -0.78
HERC1-202ENST00000558324 NDRG4Q9ULP0 352 aaKnown RBP10.15□□□□□ -0.78
HERC1-202ENST00000558324 COA3Q9Y2R0 106 aaPredicted RBP10.15□□□□□ -0.78
HERC1-202ENST00000558324 ARL2BPQ9Y2Y0 163 aa10.15□□□□□ -0.78
HERC1-202ENST00000558324 MALRD1Q5VYJ5 2156 aa10.15□□□□□ -0.79
HERC1-202ENST00000558324 CLDN25C9JDP6 229 aa10.14□□□□□ -0.79
HERC1-202ENST00000558324 AHCYL1O43865 530 aa10.14□□□□□ -0.79
HERC1-202ENST00000558324 TIMM8AO60220 97 aaPredicted RBP10.14□□□□□ -0.79
HERC1-202ENST00000558324 OR10H3O60404 316 aa10.14□□□□□ -0.79
HERC1-202ENST00000558324 KHDRBS3O75525 346 aaKnown RBP10.14□□□□□ -0.79
HERC1-202ENST00000558324 GPANK1O95872 356 aa10.14□□□□□ -0.79
HERC1-202ENST00000558324 TFP02787 698 aa10.14□□□□□ -0.79
HERC1-202ENST00000558324 FABP3P05413 133 aa10.14□□□□□ -0.79
HERC1-202ENST00000558324 GAAP10253 952 aa10.14□□□□□ -0.79
HERC1-202ENST00000558324 HSD17B1P14061 328 aa10.14□□□□□ -0.79
HERC1-202ENST00000558324 RRM2P31350 389 aa10.14□□□□□ -0.79
HERC1-202ENST00000558324 CRYBB2P43320 205 aa10.14□□□□□ -0.79
HERC1-202ENST00000558324 MMP15P51511 669 aa10.14□□□□□ -0.79
HERC1-202ENST00000558324 RPS6KA3P51812 740 aa10.14□□□□□ -0.79
HERC1-202ENST00000558324 DVL1P1P54792 670 aaPredicted RBP10.14□□□□□ -0.79
HERC1-202ENST00000558324 TEKQ02763 1124 aa10.14□□□□□ -0.79
HERC1-202ENST00000558324 AQP6Q13520 282 aa10.14□□□□□ -0.79
HERC1-202ENST00000558324 HFEQ30201 348 aa10.14□□□□□ -0.79
HERC1-202ENST00000558324 KRTAP24-1Q3LI83 254 aa10.14□□□□□ -0.79
HERC1-202ENST00000558324 MBNL2Q5VZF2 373 aaKnown RBP10.14□□□□□ -0.79
HERC1-202ENST00000558324 SMARCD3Q6STE5 483 aa10.14□□□□□ -0.79
HERC1-202ENST00000558324 ARL9Q6T311 187 aa10.14□□□□□ -0.79
HERC1-202ENST00000558324 DPY19L2P2Q6ZN68 376 aa10.14□□□□□ -0.79
HERC1-202ENST00000558324 VASH1Q7L8A9 365 aaPredicted RBP10.14□□□□□ -0.79
HERC1-202ENST00000558324 ZER1Q7Z7L7 766 aa10.14□□□□□ -0.79
HERC1-202ENST00000558324 SYT9Q86SS6 491 aa10.14□□□□□ -0.79
HERC1-202ENST00000558324 ADCK1Q86TW2 530 aa10.14□□□□□ -0.79
HERC1-202ENST00000558324 GLB1L2Q8IW92 636 aa10.14□□□□□ -0.79
HERC1-202ENST00000558324 DEFB107AQ8IZN7 70 aa10.14□□□□□ -0.79
HERC1-202ENST00000558324 CCL17Q92583 94 aa10.14□□□□□ -0.79
HERC1-202ENST00000558324 C1orf159Q96HA4 380 aa10.14□□□□□ -0.79
HERC1-202ENST00000558324 TSSK2Q96PF2 358 aa10.14□□□□□ -0.79
HERC1-202ENST00000558324 ERMAPQ96PL5 475 aaPredicted RBP10.14□□□□□ -0.79
HERC1-202ENST00000558324 GPX7Q96SL4 187 aaPredicted RBP10.14□□□□□ -0.79
HERC1-202ENST00000558324 FUZQ9BT04 418 aa10.14□□□□□ -0.79
HERC1-202ENST00000558324 VSX1Q9NZR4 365 aaPredicted RBP10.14□□□□□ -0.79
HERC1-202ENST00000558324 GRIP1Q9Y3R0 1128 aa10.14□□□□□ -0.79
HERC1-202ENST00000558324 RER1O15258 196 aa10.13□□□□□ -0.79
HERC1-202ENST00000558324 ICMTO60725 284 aa10.13□□□□□ -0.79
HERC1-202ENST00000558324 DCTN3O75935 186 aa10.13□□□□□ -0.79
HERC1-202ENST00000558324 MSMBP08118 114 aa10.13□□□□□ -0.79
HERC1-202ENST00000558324 COX5BP10606 129 aa10.13□□□□□ -0.79
HERC1-202ENST00000558324 GSTM3P21266 225 aa10.13□□□□□ -0.79
HERC1-202ENST00000558324 CDKN2AP42771 156 aaKnown RBP10.13□□□□□ -0.79
HERC1-202ENST00000558324 SMIM11AP58511 58 aa10.13□□□□□ -0.79
HERC1-202ENST00000558324 MEP1BQ16820 701 aa10.13□□□□□ -0.79
HERC1-202ENST00000558324 SPRNQ5BIV9 151 aa10.13□□□□□ -0.79
HERC1-202ENST00000558324 FAM209AQ5JX71 171 aa10.13□□□□□ -0.79
HERC1-202ENST00000558324 LEG1Q6P5S2 330 aa10.13□□□□□ -0.79
HERC1-202ENST00000558324 C16orf89Q6UX73 402 aa10.13□□□□□ -0.79
HERC1-202ENST00000558324 CYP2R1Q6VVX0 501 aa10.13□□□□□ -0.79
HERC1-202ENST00000558324 PIGWQ7Z7B1 504 aa10.13□□□□□ -0.79
HERC1-202ENST00000558324 JAZF1Q86VZ6 243 aa10.13□□□□□ -0.79
HERC1-202ENST00000558324 OR51F2Q8NH61 342 aa10.13□□□□□ -0.79
HERC1-202ENST00000558324 TMEM186Q96B77 213 aa10.13□□□□□ -0.79
HERC1-202ENST00000558324 ELMOD3Q96FG2 381 aa10.13□□□□□ -0.79
HERC1-202ENST00000558324 NMNAT3Q96T66 252 aa10.13□□□□□ -0.79
HERC1-202ENST00000558324 IFT27Q9BW83 186 aa10.13□□□□□ -0.79
HERC1-202ENST00000558324 OR52D1Q9H346 318 aa10.13□□□□□ -0.79
HERC1-202ENST00000558324 CYSLTR2Q9NS75 346 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms