RNA–Protein interactions for RNA: ENST00000556343.1

ACTN1-218, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 274 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-218ENST00000556343 IGHV1-2P23083 117 aa8.09□□□□□ -1.11
ACTN1-218ENST00000556343 PSMB9P28065 219 aa8.09□□□□□ -1.11
ACTN1-218ENST00000556343 HSD11B1P28845 292 aa8.09□□□□□ -1.11
ACTN1-218ENST00000556343 DCTDP32321 178 aa8.09□□□□□ -1.11
ACTN1-218ENST00000556343 MAP2K4P45985 399 aa8.09□□□□□ -1.11
ACTN1-218ENST00000556343 HCCSP53701 268 aa8.09□□□□□ -1.11
ACTN1-218ENST00000556343 BDH1Q02338 343 aa8.09□□□□□ -1.11
ACTN1-218ENST00000556343 ROM1Q03395 351 aa8.09□□□□□ -1.11
ACTN1-218ENST00000556343 ZNF85Q03923 595 aa8.09□□□□□ -1.11
ACTN1-218ENST00000556343 MRPL49Q13405 166 aaKnown RBP8.09□□□□□ -1.11
ACTN1-218ENST00000556343 ZNF829Q3KNS6 432 aaPredicted RBP8.09□□□□□ -1.11
ACTN1-218ENST00000556343 TBRG1Q3YBR2 411 aa8.09□□□□□ -1.11
ACTN1-218ENST00000556343 CDONQ4KMG0 1287 aa8.09□□□□□ -1.11
ACTN1-218ENST00000556343 CCDC58Q4VC31 144 aa8.09□□□□□ -1.11
ACTN1-218ENST00000556343 C4orf17Q53FE4 359 aa8.09□□□□□ -1.11
ACTN1-218ENST00000556343 SFRP5Q5T4F7 317 aa8.09□□□□□ -1.11
ACTN1-218ENST00000556343 C9orf135Q5VTT2 229 aa8.09□□□□□ -1.11
ACTN1-218ENST00000556343 UBE2UQ5VVX9 321 aa8.09□□□□□ -1.11
ACTN1-218ENST00000556343 LINGO2Q7L985 606 aa8.09□□□□□ -1.11
ACTN1-218ENST00000556343 BHLHA15Q7RTS1 189 aaPredicted RBP8.09□□□□□ -1.11
ACTN1-218ENST00000556343 GPR141Q7Z602 305 aa8.09□□□□□ -1.11
ACTN1-218ENST00000556343 LUZP2Q86TE4 346 aa8.09□□□□□ -1.11
ACTN1-218ENST00000556343 FJX1Q86VR8 437 aa8.09□□□□□ -1.11
ACTN1-218ENST00000556343 LINC00346Q8IVM7 164 aa8.09□□□□□ -1.11
ACTN1-218ENST00000556343 SKA3Q8IX90 412 aa8.09□□□□□ -1.11
ACTN1-218ENST00000556343 RPRMLQ8N4K4 120 aa8.09□□□□□ -1.11
ACTN1-218ENST00000556343 ZNF433Q8N7K0 673 aaPredicted RBP8.09□□□□□ -1.11
ACTN1-218ENST00000556343 NAXEQ8NCW5 288 aa8.09□□□□□ -1.11
ACTN1-218ENST00000556343 OR52N5Q8NH56 324 aa8.09□□□□□ -1.11
ACTN1-218ENST00000556343 SPRYD4Q8WW59 207 aaPredicted RBP8.09□□□□□ -1.11
ACTN1-218ENST00000556343 GATAD2BQ8WXI9 593 aa8.09□□□□□ -1.11
ACTN1-218ENST00000556343 BCL2L2Q92843 193 aaPredicted RBP8.09□□□□□ -1.11
ACTN1-218ENST00000556343 NABP1Q96AH0 204 aa8.09□□□□□ -1.11
ACTN1-218ENST00000556343 MUCL1Q96DR8 90 aa8.09□□□□□ -1.11
ACTN1-218ENST00000556343 BOD1Q96IK1 185 aa8.09□□□□□ -1.11
ACTN1-218ENST00000556343 OR8B4Q96RC9 309 aa8.09□□□□□ -1.11
ACTN1-218ENST00000556343 SH3GL3Q99963 347 aa8.09□□□□□ -1.11
ACTN1-218ENST00000556343 RHNO1Q9BSD3 238 aa8.09□□□□□ -1.11
ACTN1-218ENST00000556343 ABHD6Q9BV23 337 aa8.09□□□□□ -1.11
ACTN1-218ENST00000556343 HDHD2Q9H0R4 259 aa8.09□□□□□ -1.11
ACTN1-218ENST00000556343 OR10A4Q9H209 315 aa8.09□□□□□ -1.11
ACTN1-218ENST00000556343 BATF3Q9NR55 127 aa8.09□□□□□ -1.11
ACTN1-218ENST00000556343 PLEK2Q9NYT0 353 aa8.09□□□□□ -1.11
ACTN1-218ENST00000556343 ASH2LQ9UBL3 628 aa8.09□□□□□ -1.11
ACTN1-218ENST00000556343 GNG8Q9UK08 70 aa8.09□□□□□ -1.11
ACTN1-218ENST00000556343 AMDHD2Q9Y303 409 aa8.09□□□□□ -1.11
ACTN1-218ENST00000556343 ITPR1Q14643 2758 aa8.08□□□□□ -1.12
ACTN1-218ENST00000556343 A0A096LPE4 126 aa8.08□□□□□ -1.12
ACTN1-218ENST00000556343 A0A1W2PPZ6 126 aa8.08□□□□□ -1.12
ACTN1-218ENST00000556343 LRRTM2O43300 516 aa8.08□□□□□ -1.12
ACTN1-218ENST00000556343 SGCEO43556 437 aa8.08□□□□□ -1.12
ACTN1-218ENST00000556343 RAD51DO75771 328 aa8.08□□□□□ -1.12
ACTN1-218ENST00000556343 ITGA5P08648 1049 aa8.08□□□□□ -1.12
ACTN1-218ENST00000556343 HTR1AP08908 422 aa8.08□□□□□ -1.12
ACTN1-218ENST00000556343 HSMCR30P0CW71 290 aa8.08□□□□□ -1.12
ACTN1-218ENST00000556343 SMIM18P0DKX4 95 aa8.08□□□□□ -1.12
ACTN1-218ENST00000556343 COX5BP10606 129 aa8.08□□□□□ -1.12
ACTN1-218ENST00000556343 PPP3CBP16298 524 aa8.08□□□□□ -1.12
ACTN1-218ENST00000556343 COX5AP20674 150 aa8.08□□□□□ -1.12
ACTN1-218ENST00000556343 EDNRAP25101 427 aa8.08□□□□□ -1.12
ACTN1-218ENST00000556343 ACSM1Q08AH1 577 aa8.08□□□□□ -1.12
ACTN1-218ENST00000556343 MLLT11Q13015 90 aaPredicted RBP8.08□□□□□ -1.12
ACTN1-218ENST00000556343 GPR50Q13585 617 aa8.08□□□□□ -1.12
ACTN1-218ENST00000556343 ENDOGQ14249 297 aaKnown RBP8.08□□□□□ -1.12
ACTN1-218ENST00000556343 RAB35Q15286 201 aa8.08□□□□□ -1.12
ACTN1-218ENST00000556343 GABRA6Q16445 453 aa8.08□□□□□ -1.12
ACTN1-218ENST00000556343 TIGD6Q17RP2 521 aa8.08□□□□□ -1.12
ACTN1-218ENST00000556343 ELFN2Q5R3F8 820 aa8.08□□□□□ -1.12
ACTN1-218ENST00000556343 ARL9Q6T311 187 aa8.08□□□□□ -1.12
ACTN1-218ENST00000556343 LYPD4Q6UWN0 246 aa8.08□□□□□ -1.12
ACTN1-218ENST00000556343 VASH1Q7L8A9 365 aaPredicted RBP8.08□□□□□ -1.12
ACTN1-218ENST00000556343 CXorf67Q86X51 503 aaPredicted RBP8.08□□□□□ -1.12
ACTN1-218ENST00000556343 GABRG1Q8N1C3 465 aa8.08□□□□□ -1.12
ACTN1-218ENST00000556343 OR1J2Q8NGS2 313 aa8.08□□□□□ -1.12
ACTN1-218ENST00000556343 CA5BP1Q8WTZ4 195 aa8.08□□□□□ -1.12
ACTN1-218ENST00000556343 RNF133Q8WVZ7 376 aa8.08□□□□□ -1.12
ACTN1-218ENST00000556343 SGCDQ92629 289 aa8.08□□□□□ -1.12
ACTN1-218ENST00000556343 UFD1Q92890 307 aa8.08□□□□□ -1.12
ACTN1-218ENST00000556343 SLAMF6Q96DU3 332 aa8.08□□□□□ -1.12
ACTN1-218ENST00000556343 ZNF837Q96EG3 531 aaPredicted RBP8.08□□□□□ -1.12
ACTN1-218ENST00000556343 C4orf36Q96KX1 117 aa8.08□□□□□ -1.12
ACTN1-218ENST00000556343 COG8Q96MW5 612 aa8.08□□□□□ -1.12
ACTN1-218ENST00000556343 SIGLEC11Q96RL6 698 aa8.08□□□□□ -1.12
ACTN1-218ENST00000556343 MGLLQ99685 303 aa8.08□□□□□ -1.12
ACTN1-218ENST00000556343 COQ7Q99807 217 aa8.08□□□□□ -1.12
ACTN1-218ENST00000556343 ATF6BQ99941 703 aa8.08□□□□□ -1.12
ACTN1-218ENST00000556343 ELOVL3Q9HB03 270 aa8.08□□□□□ -1.12
ACTN1-218ENST00000556343 KCNJ16Q9NPI9 418 aa8.08□□□□□ -1.12
ACTN1-218ENST00000556343 NDUFA13Q9P0J0 144 aa8.08□□□□□ -1.12
ACTN1-218ENST00000556343 CLEC2DQ9UHP7 191 aa8.08□□□□□ -1.12
ACTN1-218ENST00000556343 ATPIF1Q9UII2 106 aa8.08□□□□□ -1.12
ACTN1-218ENST00000556343 COPS3Q9UNS2 423 aa8.08□□□□□ -1.12
ACTN1-218ENST00000556343 LHFPL6Q9Y693 200 aa8.08□□□□□ -1.12
ACTN1-218ENST00000556343 ATRXP46100 2492 aa8.08□□□□□ -1.12
ACTN1-218ENST00000556343 USP24Q9UPU5 2620 aa8.08□□□□□ -1.12
ACTN1-218ENST00000556343 ZGRF1Q86YA3 2104 aa8.08□□□□□ -1.12
ACTN1-218ENST00000556343 POLEQ07864 2286 aa8.07□□□□□ -1.12
ACTN1-218ENST00000556343 ARPC4-TTLL3A0A0A6YYG9 625 aa8.07□□□□□ -1.12
ACTN1-218ENST00000556343 OR6C6A6NF89 314 aa8.07□□□□□ -1.12
ACTN1-218ENST00000556343 ACOD1A6NK06 481 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms