RNA–Protein interactions for RNA: ENST00000554928.1

SYNE2-214, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 1,048 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-214ENST00000554928 TEX47Q8TBZ9 253 aa10.63□□□□□ -0.71
SYNE2-214ENST00000554928 Q96MF0 132 aa10.63□□□□□ -0.71
SYNE2-214ENST00000554928 DOK1Q99704 481 aa10.63□□□□□ -0.71
SYNE2-214ENST00000554928 SYT3Q9BQG1 590 aa10.63□□□□□ -0.71
SYNE2-214ENST00000554928 NMNAT2Q9BZQ4 307 aa10.63□□□□□ -0.71
SYNE2-214ENST00000554928 GRIP2Q9C0E4 1043 aa10.63□□□□□ -0.71
SYNE2-214ENST00000554928 KCNN2Q9H2S1 579 aa10.63□□□□□ -0.71
SYNE2-214ENST00000554928 POFUT1Q9H488 388 aa10.63□□□□□ -0.71
SYNE2-214ENST00000554928 ZNF442Q9H7R0 627 aa10.63□□□□□ -0.71
SYNE2-214ENST00000554928 CDH20Q9HBT6 801 aa10.63□□□□□ -0.71
SYNE2-214ENST00000554928 FAIMQ9NVQ4 179 aa10.63□□□□□ -0.71
SYNE2-214ENST00000554928 TIMM10BQ9Y5J6 103 aa10.63□□□□□ -0.71
SYNE2-214ENST00000554928 FKBP7Q9Y680 259 aa10.63□□□□□ -0.71
SYNE2-214ENST00000554928 MAP1AP78559 2803 aaPredicted RBP10.63□□□□□ -0.71
SYNE2-214ENST00000554928 SAC3D1A6NKF1 404 aa10.62□□□□□ -0.71
SYNE2-214ENST00000554928 C12orf71A8MTZ7 269 aa10.62□□□□□ -0.71
SYNE2-214ENST00000554928 ANKRD65E5RJM6 399 aa10.62□□□□□ -0.71
SYNE2-214ENST00000554928 M0R129 80 aa10.62□□□□□ -0.71
SYNE2-214ENST00000554928 SYNGR3O43761 229 aa10.62□□□□□ -0.71
SYNE2-214ENST00000554928 DOK2O60496 412 aa10.62□□□□□ -0.71
SYNE2-214ENST00000554928 ENTPD5O75356 428 aa10.62□□□□□ -0.71
SYNE2-214ENST00000554928 SNAP29O95721 258 aa10.62□□□□□ -0.71
SYNE2-214ENST00000554928 CLPTM1O96005 669 aa10.62□□□□□ -0.71
SYNE2-214ENST00000554928 NGFP01138 241 aa10.62□□□□□ -0.71
SYNE2-214ENST00000554928 DBHP09172 617 aa10.62□□□□□ -0.71
SYNE2-214ENST00000554928 ANXA8P13928 327 aa10.62□□□□□ -0.71
SYNE2-214ENST00000554928 SPI1P17947 270 aa10.62□□□□□ -0.71
SYNE2-214ENST00000554928 ANOS1P23352 680 aa10.62□□□□□ -0.71
SYNE2-214ENST00000554928 GRK5P34947 590 aa10.62□□□□□ -0.71
SYNE2-214ENST00000554928 APLNRP35414 380 aa10.62□□□□□ -0.71
SYNE2-214ENST00000554928 GLRXP35754 106 aa10.62□□□□□ -0.71
SYNE2-214ENST00000554928 GGT2P36268 569 aa10.62□□□□□ -0.71
SYNE2-214ENST00000554928 GUCA1AP43080 201 aaPredicted RBP10.62□□□□□ -0.71
SYNE2-214ENST00000554928 LSM6P62312 80 aaKnown RBP10.62□□□□□ -0.71
SYNE2-214ENST00000554928 HIST1H3AP68431 136 aa10.62□□□□□ -0.71
SYNE2-214ENST00000554928 CDK5Q00535 292 aa10.62□□□□□ -0.71
SYNE2-214ENST00000554928 TEKQ02763 1124 aa10.62□□□□□ -0.71
SYNE2-214ENST00000554928 PLP2Q04941 152 aa10.62□□□□□ -0.71
SYNE2-214ENST00000554928 MAD2L1BPQ15013 274 aaPredicted RBP10.62□□□□□ -0.71
SYNE2-214ENST00000554928 EFNB3Q15768 340 aa10.62□□□□□ -0.71
SYNE2-214ENST00000554928 SPATA46Q5T0L3 261 aa10.62□□□□□ -0.71
SYNE2-214ENST00000554928 HIST2H3PS2Q5TEC6 136 aa10.62□□□□□ -0.71
SYNE2-214ENST00000554928 CFAP77Q6ZQR2 320 aa10.62□□□□□ -0.71
SYNE2-214ENST00000554928 HIST2H3AQ71DI3 136 aa10.62□□□□□ -0.71
SYNE2-214ENST00000554928 ZNF511Q8NB15 262 aa10.62□□□□□ -0.71
SYNE2-214ENST00000554928 GTF3AQ92664 365 aaKnown RBP10.62□□□□□ -0.71
SYNE2-214ENST00000554928 MRPL24Q96A35 216 aaKnown RBP10.62□□□□□ -0.71
SYNE2-214ENST00000554928 NRBF2Q96F24 287 aa10.62□□□□□ -0.71
SYNE2-214ENST00000554928 SORCS2Q96PQ0 1159 aa10.62□□□□□ -0.71
SYNE2-214ENST00000554928 TMUB1Q9BVT8 246 aa10.62□□□□□ -0.71
SYNE2-214ENST00000554928 PLK3Q9H4B4 646 aa10.62□□□□□ -0.71
SYNE2-214ENST00000554928 WDR76Q9H967 626 aa10.62□□□□□ -0.71
SYNE2-214ENST00000554928 CMC2Q9NRP2 79 aa10.62□□□□□ -0.71
SYNE2-214ENST00000554928 TMEFF2Q9UIK5 374 aaPredicted RBP10.62□□□□□ -0.71
SYNE2-214ENST00000554928 FBXL3Q9UKT7 428 aa10.62□□□□□ -0.71
SYNE2-214ENST00000554928 OR6C6A6NF89 314 aa10.61□□□□□ -0.71
SYNE2-214ENST00000554928 G3V2T6 193 aa10.61□□□□□ -0.71
SYNE2-214ENST00000554928 SGCEO43556 437 aa10.61□□□□□ -0.71
SYNE2-214ENST00000554928 ZNF23P17027 643 aa10.61□□□□□ -0.71
SYNE2-214ENST00000554928 POLR2IP36954 125 aaKnown RBP10.61□□□□□ -0.71
SYNE2-214ENST00000554928 ALDH3B1P43353 468 aa10.61□□□□□ -0.71
SYNE2-214ENST00000554928 HTR5AP47898 357 aa10.61□□□□□ -0.71
SYNE2-214ENST00000554928 GDI2P50395 445 aaKnown RBP10.61□□□□□ -0.71
SYNE2-214ENST00000554928 UCP2P55851 309 aa10.61□□□□□ -0.71
SYNE2-214ENST00000554928 PCBD1P61457 104 aa10.61□□□□□ -0.71
SYNE2-214ENST00000554928 GALK2Q01415 458 aa10.61□□□□□ -0.71
SYNE2-214ENST00000554928 SCRN3Q0VDG4 424 aa10.61□□□□□ -0.71
SYNE2-214ENST00000554928 AQP6Q13520 282 aa10.61□□□□□ -0.71
SYNE2-214ENST00000554928 RSPO1Q2MKA7 263 aaPredicted RBP10.61□□□□□ -0.71
SYNE2-214ENST00000554928 ALKBH6Q3KRA9 238 aa10.61□□□□□ -0.71
SYNE2-214ENST00000554928 LINC01590Q5TEZ4 76 aa10.61□□□□□ -0.71
SYNE2-214ENST00000554928 SHEQ5VZ18 495 aa10.61□□□□□ -0.71
SYNE2-214ENST00000554928 SLC18B1Q6NT16 456 aa10.61□□□□□ -0.71
SYNE2-214ENST00000554928 SLC27A4Q6P1M0 643 aa10.61□□□□□ -0.71
SYNE2-214ENST00000554928 DNM1P34Q6PK57 102 aa10.61□□□□□ -0.71
SYNE2-214ENST00000554928 SYT9Q86SS6 491 aa10.61□□□□□ -0.71
SYNE2-214ENST00000554928 ICA1LQ8NDH6 482 aa10.61□□□□□ -0.71
SYNE2-214ENST00000554928 PROKR2Q8NFJ6 384 aa10.61□□□□□ -0.71
SYNE2-214ENST00000554928 BBS1Q8NFJ9 593 aa10.61□□□□□ -0.71
SYNE2-214ENST00000554928 OR10S1Q8NGN2 331 aa10.61□□□□□ -0.71
SYNE2-214ENST00000554928 PTP4A1Q93096 173 aa10.61□□□□□ -0.71
SYNE2-214ENST00000554928 MAP6Q96JE9 813 aa10.61□□□□□ -0.71
SYNE2-214ENST00000554928 GABARAPL1Q9H0R8 117 aa10.61□□□□□ -0.71
SYNE2-214ENST00000554928 PNRC2Q9NPJ4 139 aaKnown RBP10.61□□□□□ -0.71
SYNE2-214ENST00000554928 DLL4Q9NR61 685 aa10.61□□□□□ -0.71
SYNE2-214ENST00000554928 PAPOLBQ9NRJ5 636 aaKnown RBP10.61□□□□□ -0.71
SYNE2-214ENST00000554928 PLEK2Q9NYT0 353 aa10.61□□□□□ -0.71
SYNE2-214ENST00000554928 KIF17Q9P2E2 1029 aa10.61□□□□□ -0.71
SYNE2-214ENST00000554928 KLHL21Q9UJP4 597 aa10.61□□□□□ -0.71
SYNE2-214ENST00000554928 OAZ3Q9UMX2 235 aa10.61□□□□□ -0.71
SYNE2-214ENST00000554928 BAIAP2Q9UQB8 552 aa10.61□□□□□ -0.71
SYNE2-214ENST00000554928 POLR1DQ9Y2S0 133 aa10.61□□□□□ -0.71
SYNE2-214ENST00000554928 CMAHPQ9Y471 501 aa10.61□□□□□ -0.71
SYNE2-214ENST00000554928 ANK3Q12955 4377 aaKnown RBP10.61□□□□□ -0.71
SYNE2-214ENST00000554928 TEP1Q99973 2627 aaKnown RBP10.6□□□□□ -0.71
SYNE2-214ENST00000554928 RIIAD1A6NNX1 92 aa10.6□□□□□ -0.71
SYNE2-214ENST00000554928 B9A039 149 aa10.6□□□□□ -0.71
SYNE2-214ENST00000554928 H7C417 338 aa10.6□□□□□ -0.71
SYNE2-214ENST00000554928 SURF4O15260 269 aa10.6□□□□□ -0.71
SYNE2-214ENST00000554928 SSX4O60224 188 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms