RNA–Protein interactions for RNA: ENST00000554685.2

SHOX2-206, Transcript of short stature homeobox 2, humanhuman

TSL 5

Gene SHOX2, Length 439 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-206ENST00000554685 ADRA2AP08913 450 aa12.6□□□□□ -0.39
SHOX2-206ENST00000554685 ZNF19P17023 458 aa12.6□□□□□ -0.39
SHOX2-206ENST00000554685 BMP5P22003 454 aa12.6□□□□□ -0.39
SHOX2-206ENST00000554685 PAX7P23759 505 aa12.6□□□□□ -0.39
SHOX2-206ENST00000554685 PSMB9P28065 219 aa12.6□□□□□ -0.39
SHOX2-206ENST00000554685 RPS27P42677 84 aaKnown RBP12.6□□□□□ -0.39
SHOX2-206ENST00000554685 GBX2P52951 348 aaPredicted RBP12.6□□□□□ -0.39
SHOX2-206ENST00000554685 TLE1Q04724 770 aa12.6□□□□□ -0.39
SHOX2-206ENST00000554685 ACSM1Q08AH1 577 aa12.6□□□□□ -0.39
SHOX2-206ENST00000554685 MRPL49Q13405 166 aaKnown RBP12.6□□□□□ -0.39
SHOX2-206ENST00000554685 OR2G6Q5TZ20 316 aa12.6□□□□□ -0.39
SHOX2-206ENST00000554685 C9orf135Q5VTT2 229 aa12.6□□□□□ -0.39
SHOX2-206ENST00000554685 XAF1Q6GPH4 301 aa12.6□□□□□ -0.39
SHOX2-206ENST00000554685 TMEM53Q6P2H8 277 aa12.6□□□□□ -0.39
SHOX2-206ENST00000554685 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.6□□□□□ -0.39
SHOX2-206ENST00000554685 ZNF679Q8IYX0 411 aa12.6□□□□□ -0.39
SHOX2-206ENST00000554685 LRRC18Q8N456 261 aa12.6□□□□□ -0.39
SHOX2-206ENST00000554685 ZNF433Q8N7K0 673 aaPredicted RBP12.6□□□□□ -0.39
SHOX2-206ENST00000554685 ST7LQ8TDW4 575 aa12.6□□□□□ -0.39
SHOX2-206ENST00000554685 SMAP2Q8WU79 429 aaPredicted RBP12.6□□□□□ -0.39
SHOX2-206ENST00000554685 RNF133Q8WVZ7 376 aa12.6□□□□□ -0.39
SHOX2-206ENST00000554685 SPRYD4Q8WW59 207 aaPredicted RBP12.6□□□□□ -0.39
SHOX2-206ENST00000554685 BCL2L2Q92843 193 aaPredicted RBP12.6□□□□□ -0.39
SHOX2-206ENST00000554685 SLAMF6Q96DU3 332 aa12.6□□□□□ -0.39
SHOX2-206ENST00000554685 C4orf36Q96KX1 117 aa12.6□□□□□ -0.39
SHOX2-206ENST00000554685 COG8Q96MW5 612 aa12.6□□□□□ -0.39
SHOX2-206ENST00000554685 DOCK7Q96N67 2140 aa12.6□□□□□ -0.39
SHOX2-206ENST00000554685 SH3GL3Q99963 347 aa12.6□□□□□ -0.39
SHOX2-206ENST00000554685 USB1Q9BQ65 265 aaKnown RBP12.6□□□□□ -0.39
SHOX2-206ENST00000554685 HDHD5Q9BXW7 423 aa12.6□□□□□ -0.39
SHOX2-206ENST00000554685 NIPAL2Q9H841 368 aa12.6□□□□□ -0.39
SHOX2-206ENST00000554685 MOV10Q9HCE1 1003 aaKnown RBP12.6□□□□□ -0.39
SHOX2-206ENST00000554685 TRIM36Q9NQ86 728 aa12.6□□□□□ -0.39
SHOX2-206ENST00000554685 BABAM2Q9NXR7 383 aa12.6□□□□□ -0.39
SHOX2-206ENST00000554685 GNG8Q9UK08 70 aa12.6□□□□□ -0.39
SHOX2-206ENST00000554685 LSM2Q9Y333 95 aaKnown RBP12.6□□□□□ -0.39
SHOX2-206ENST00000554685 TIMM10BQ9Y5J6 103 aa12.6□□□□□ -0.39
SHOX2-206ENST00000554685 ARHGAP21Q5T5U3 1957 aa12.6□□□□□ -0.39
SHOX2-206ENST00000554685 BSNQ9UPA5 3926 aa12.59□□□□□ -0.39
SHOX2-206ENST00000554685 PRRC2CQ9Y520 2896 aaKnown RBP12.59□□□□□ -0.39
SHOX2-206ENST00000554685 APOC1P02654 83 aa12.59□□□□□ -0.39
SHOX2-206ENST00000554685 TFAP2AP05549 437 aa12.59□□□□□ -0.39
SHOX2-206ENST00000554685 LCKP06239 509 aa12.59□□□□□ -0.39
SHOX2-206ENST00000554685 H2BFMP0C1H6 154 aa12.59□□□□□ -0.39
SHOX2-206ENST00000554685 CHRNB4P30926 498 aa12.59□□□□□ -0.39
SHOX2-206ENST00000554685 ARR3P36575 388 aa12.59□□□□□ -0.39
SHOX2-206ENST00000554685 ALDH3B2P48448 385 aa12.59□□□□□ -0.39
SHOX2-206ENST00000554685 RIDAP52758 137 aaKnown RBP12.59□□□□□ -0.39
SHOX2-206ENST00000554685 UBE2NP61088 152 aaKnown RBP12.59□□□□□ -0.39
SHOX2-206ENST00000554685 GRB2P62993 217 aaKnown RBP12.59□□□□□ -0.39
SHOX2-206ENST00000554685 HIST1H3AP68431 136 aa12.59□□□□□ -0.39
SHOX2-206ENST00000554685 ECH1Q13011 328 aa12.59□□□□□ -0.39
SHOX2-206ENST00000554685 MLLT11Q13015 90 aaPredicted RBP12.59□□□□□ -0.39
SHOX2-206ENST00000554685 RAB35Q15286 201 aa12.59□□□□□ -0.39
SHOX2-206ENST00000554685 TAF13Q15543 124 aa12.59□□□□□ -0.39
SHOX2-206ENST00000554685 TIGD6Q17RP2 521 aa12.59□□□□□ -0.39
SHOX2-206ENST00000554685 SLC25A35Q3KQZ1 300 aa12.59□□□□□ -0.39
SHOX2-206ENST00000554685 TBRG1Q3YBR2 411 aa12.59□□□□□ -0.39
SHOX2-206ENST00000554685 SYT6Q5T7P8 510 aaPredicted RBP12.59□□□□□ -0.39
SHOX2-206ENST00000554685 HIST2H3PS2Q5TEC6 136 aa12.59□□□□□ -0.39
SHOX2-206ENST00000554685 CORO6Q6QEF8 472 aa12.59□□□□□ -0.39
SHOX2-206ENST00000554685 HIST2H3AQ71DI3 136 aa12.59□□□□□ -0.39
SHOX2-206ENST00000554685 VASH1Q7L8A9 365 aaPredicted RBP12.59□□□□□ -0.39
SHOX2-206ENST00000554685 SSX6Q7RTT6 188 aa12.59□□□□□ -0.39
SHOX2-206ENST00000554685 SKA3Q8IX90 412 aa12.59□□□□□ -0.39
SHOX2-206ENST00000554685 ALDH16A1Q8IZ83 802 aa12.59□□□□□ -0.39
SHOX2-206ENST00000554685 YIPF7Q8N8F6 280 aa12.59□□□□□ -0.39
SHOX2-206ENST00000554685 GATAD2BQ8WXI9 593 aa12.59□□□□□ -0.39
SHOX2-206ENST00000554685 MGLLQ99685 303 aa12.59□□□□□ -0.39
SHOX2-206ENST00000554685 HDHD2Q9H0R4 259 aa12.59□□□□□ -0.39
SHOX2-206ENST00000554685 RNF121Q9H920 327 aa12.59□□□□□ -0.39
SHOX2-206ENST00000554685 OBP2BQ9NPH6 170 aa12.59□□□□□ -0.39
SHOX2-206ENST00000554685 BATF3Q9NR55 127 aa12.59□□□□□ -0.39
SHOX2-206ENST00000554685 CENPMQ9NSP4 180 aa12.59□□□□□ -0.39
SHOX2-206ENST00000554685 ELOVL5Q9NYP7 299 aa12.59□□□□□ -0.39
SHOX2-206ENST00000554685 ATPIF1Q9UII2 106 aa12.59□□□□□ -0.39
SHOX2-206ENST00000554685 FBXL3Q9UKT7 428 aa12.59□□□□□ -0.39
SHOX2-206ENST00000554685 KLHDC2Q9Y2U9 406 aa12.59□□□□□ -0.39
SHOX2-206ENST00000554685 MED12LQ86YW9 2145 aa12.59□□□□□ -0.39
SHOX2-206ENST00000554685 ALPK2Q86TB3 2170 aa12.59□□□□□ -0.39
SHOX2-206ENST00000554685 CACNA1BQ00975 2339 aa12.59□□□□□ -0.39
SHOX2-206ENST00000554685 A0A096LPE4 126 aa12.58□□□□□ -0.4
SHOX2-206ENST00000554685 ARPC4-TTLL3A0A0A6YYG9 625 aa12.58□□□□□ -0.4
SHOX2-206ENST00000554685 A0A1W2PPZ6 126 aa12.58□□□□□ -0.4
SHOX2-206ENST00000554685 A8MXE2 369 aa12.58□□□□□ -0.4
SHOX2-206ENST00000554685 SGCEO43556 437 aa12.58□□□□□ -0.4
SHOX2-206ENST00000554685 LYZL6O75951 148 aa12.58□□□□□ -0.4
SHOX2-206ENST00000554685 HSMCR30P0CW71 290 aa12.58□□□□□ -0.4
SHOX2-206ENST00000554685 PSKH1P11801 424 aa12.58□□□□□ -0.4
SHOX2-206ENST00000554685 ZNF32P17041 273 aa12.58□□□□□ -0.4
SHOX2-206ENST00000554685 PSMB1P20618 241 aaKnown RBP12.58□□□□□ -0.4
SHOX2-206ENST00000554685 IL32P24001 234 aa12.58□□□□□ -0.4
SHOX2-206ENST00000554685 DCTDP32321 178 aa12.58□□□□□ -0.4
SHOX2-206ENST00000554685 FOXG1P55316 489 aaPredicted RBP12.58□□□□□ -0.4
SHOX2-206ENST00000554685 OR12D2P58182 307 aa12.58□□□□□ -0.4
SHOX2-206ENST00000554685 GABRA6Q16445 453 aa12.58□□□□□ -0.4
SHOX2-206ENST00000554685 CCDC58Q4VC31 144 aa12.58□□□□□ -0.4
SHOX2-206ENST00000554685 TP53I3Q53FA7 332 aa12.58□□□□□ -0.4
SHOX2-206ENST00000554685 C4orf17Q53FE4 359 aa12.58□□□□□ -0.4
SHOX2-206ENST00000554685 ELFN2Q5R3F8 820 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms