RNA–Protein interactions for RNA: ENST00000540010.1

TRAF1-202, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 4,303 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-202ENST00000540010 PUS1Q9Y606 427 aaKnown RBP eCLIP9.06□□□□□ -0.96
TRAF1-202ENST00000540010 RPS10-NUDT3A0A1W2PQS6 291 aa9.06□□□□□ -0.96
TRAF1-202ENST00000540010 SLC22A23A1A5C7 686 aa9.06□□□□□ -0.96
TRAF1-202ENST00000540010 A6NIZ1 184 aa9.06□□□□□ -0.96
TRAF1-202ENST00000540010 GMDSO60547 372 aa9.06□□□□□ -0.96
TRAF1-202ENST00000540010 CD1CP29017 333 aa9.06□□□□□ -0.96
TRAF1-202ENST00000540010 FGF9P31371 208 aaPredicted RBP9.06□□□□□ -0.96
TRAF1-202ENST00000540010 RPS10P46783 165 aaKnown RBP9.06□□□□□ -0.96
TRAF1-202ENST00000540010 RAP1BP61224 184 aa9.06□□□□□ -0.96
TRAF1-202ENST00000540010 RAP1AP62834 184 aa9.06□□□□□ -0.96
TRAF1-202ENST00000540010 PLP2Q04941 152 aa9.06□□□□□ -0.96
TRAF1-202ENST00000540010 DUSP8Q13202 625 aa9.06□□□□□ -0.96
TRAF1-202ENST00000540010 FAM53BQ14153 422 aa9.06□□□□□ -0.96
TRAF1-202ENST00000540010 PRTGQ2VWP7 1150 aa9.06□□□□□ -0.96
TRAF1-202ENST00000540010 LINC00303Q3SY05 128 aa9.06□□□□□ -0.96
TRAF1-202ENST00000540010 H3F3CQ6NXT2 135 aa9.06□□□□□ -0.96
TRAF1-202ENST00000540010 CORO6Q6QEF8 472 aa9.06□□□□□ -0.96
TRAF1-202ENST00000540010 SLC16A9Q7RTY1 509 aa9.06□□□□□ -0.96
TRAF1-202ENST00000540010 UBALD2Q8IYN6 164 aa9.06□□□□□ -0.96
TRAF1-202ENST00000540010 GPR137CQ8N3F9 429 aa9.06□□□□□ -0.96
TRAF1-202ENST00000540010 LRRC18Q8N456 261 aa9.06□□□□□ -0.96
TRAF1-202ENST00000540010 ZNF709Q8N972 641 aa9.06□□□□□ -0.96
TRAF1-202ENST00000540010 C2CD4CQ8TF44 421 aa9.06□□□□□ -0.96
TRAF1-202ENST00000540010 ARHGDIGQ99819 225 aa9.06□□□□□ -0.96
TRAF1-202ENST00000540010 SULT4A1Q9BR01 284 aa9.06□□□□□ -0.96
TRAF1-202ENST00000540010 NICN1Q9BSH3 213 aa9.06□□□□□ -0.96
TRAF1-202ENST00000540010 MED18Q9BUE0 208 aa9.06□□□□□ -0.96
TRAF1-202ENST00000540010 PRO3102Q9H379 93 aa9.06□□□□□ -0.96
TRAF1-202ENST00000540010 CCDC86Q9H6F5 360 aaKnown RBP9.06□□□□□ -0.96
TRAF1-202ENST00000540010 PRMT8Q9NR22 394 aaPredicted RBP9.06□□□□□ -0.96
TRAF1-202ENST00000540010 COA3Q9Y2R0 106 aaPredicted RBP9.06□□□□□ -0.96
TRAF1-202ENST00000540010 EYSQ5T1H1 3165 aa9.06□□□□□ -0.96
TRAF1-202ENST00000540010 E9PI62 339 aa9.05□□□□□ -0.96
TRAF1-202ENST00000540010 UTS2O95399 124 aa9.05□□□□□ -0.96
TRAF1-202ENST00000540010 BLVRBP30043 206 aaPredicted RBP9.05□□□□□ -0.96
TRAF1-202ENST00000540010 DIO1P49895 249 aa9.05□□□□□ -0.96
TRAF1-202ENST00000540010 PER3P56645 1201 aa9.05□□□□□ -0.96
TRAF1-202ENST00000540010 ACY1Q03154 408 aa9.05□□□□□ -0.96
TRAF1-202ENST00000540010 SRYQ05066 204 aa9.05□□□□□ -0.96
TRAF1-202ENST00000540010 RIN1Q13671 783 aa9.05□□□□□ -0.96
TRAF1-202ENST00000540010 ZNF674Q2M3X9 581 aa9.05□□□□□ -0.96
TRAF1-202ENST00000540010 EXOSC6Q5RKV6 272 aaKnown RBP9.05□□□□□ -0.96
TRAF1-202ENST00000540010 AKR1C8PQ5T2L2 129 aa9.05□□□□□ -0.96
TRAF1-202ENST00000540010 ANGPTL5Q86XS5 388 aa9.05□□□□□ -0.96
TRAF1-202ENST00000540010 OR4N2Q8NGD1 307 aa9.05□□□□□ -0.96
TRAF1-202ENST00000540010 OR8D4Q8NGM9 314 aa9.05□□□□□ -0.96
TRAF1-202ENST00000540010 ST7LQ8TDW4 575 aa9.05□□□□□ -0.96
TRAF1-202ENST00000540010 TCTEX1D2Q8WW35 142 aa9.05□□□□□ -0.96
TRAF1-202ENST00000540010 BANF2Q9H503 90 aa9.05□□□□□ -0.96
TRAF1-202ENST00000540010 ISYNA1Q9NPH2 558 aa9.05□□□□□ -0.96
TRAF1-202ENST00000540010 K7EPK0 472 aa9.05□□□□□ -0.96
TRAF1-202ENST00000540010 AIPO00170 330 aa9.05□□□□□ -0.96
TRAF1-202ENST00000540010 DMWDQ09019 674 aa9.05□□□□□ -0.96
TRAF1-202ENST00000540010 SIGIRRQ6IA17 410 aa9.05□□□□□ -0.96
TRAF1-202ENST00000540010 ZNF770Q6IQ21 691 aaPredicted RBP9.05□□□□□ -0.96
TRAF1-202ENST00000540010 OVCH1Q7RTY7 1134 aa9.05□□□□□ -0.96
TRAF1-202ENST00000540010 DCXRQ7Z4W1 244 aa9.05□□□□□ -0.96
TRAF1-202ENST00000540010 FAM71E2Q8N5Q1 922 aa9.05□□□□□ -0.96
TRAF1-202ENST00000540010 OR5M1Q8NGP8 315 aa9.05□□□□□ -0.96
TRAF1-202ENST00000540010 OR14K1Q8NGZ2 314 aa9.05□□□□□ -0.96
TRAF1-202ENST00000540010 TMED6Q8WW62 240 aa9.05□□□□□ -0.96
TRAF1-202ENST00000540010 TCEAL3Q969E4 200 aa9.05□□□□□ -0.96
TRAF1-202ENST00000540010 RRNAD1Q96FB5 475 aaKnown RBP9.05□□□□□ -0.96
TRAF1-202ENST00000540010 WDR89Q96FK6 387 aaPredicted RBP9.05□□□□□ -0.96
TRAF1-202ENST00000540010 ACAD8Q9UKU7 415 aa9.05□□□□□ -0.96
TRAF1-202ENST00000540010 RARRES3Q9UL19 164 aa9.05□□□□□ -0.96
TRAF1-202ENST00000540010 PCDHGA1Q9Y5H4 931 aa9.05□□□□□ -0.96
TRAF1-202ENST00000540010 MN1Q10571 1320 aaPredicted RBP9.05□□□□□ -0.96
TRAF1-202ENST00000540010 LOC100289279A0A1B0GTE1 492 aa9.05□□□□□ -0.96
TRAF1-202ENST00000540010 EFCAB7A8K855 629 aa9.05□□□□□ -0.96
TRAF1-202ENST00000540010 FOXS1O43638 330 aa9.05□□□□□ -0.96
TRAF1-202ENST00000540010 SULT1B1O43704 296 aa9.05□□□□□ -0.96
TRAF1-202ENST00000540010 THBS1P07996 1170 aa9.05□□□□□ -0.96
TRAF1-202ENST00000540010 GIPP09681 153 aaPredicted RBP9.05□□□□□ -0.96
TRAF1-202ENST00000540010 CDK5Q00535 292 aa9.05□□□□□ -0.96
TRAF1-202ENST00000540010 TMEM176BQ3YBM2 270 aaPredicted RBP9.05□□□□□ -0.96
TRAF1-202ENST00000540010 PRAMEF20Q5VT98 475 aa9.05□□□□□ -0.96
TRAF1-202ENST00000540010 AADACL4Q5VUY2 407 aa9.05□□□□□ -0.96
TRAF1-202ENST00000540010 ZNF695Q8IW36 515 aa9.05□□□□□ -0.96
TRAF1-202ENST00000540010 HSD17B11Q8NBQ5 300 aa9.05□□□□□ -0.96
TRAF1-202ENST00000540010 RCBTB1Q8NDN9 531 aa9.05□□□□□ -0.96
TRAF1-202ENST00000540010 C17orf47Q8NEP4 570 aa9.05□□□□□ -0.96
TRAF1-202ENST00000540010 ASB17Q8WXJ9 295 aa9.05□□□□□ -0.96
TRAF1-202ENST00000540010 HSD17B8Q92506 261 aa9.05□□□□□ -0.96
TRAF1-202ENST00000540010 PHYHIPQ92561 330 aa9.05□□□□□ -0.96
TRAF1-202ENST00000540010 DHRS9Q9BPW9 319 aa9.05□□□□□ -0.96
TRAF1-202ENST00000540010 SLC25A21Q9BQT8 299 aaPredicted RBP9.05□□□□□ -0.96
TRAF1-202ENST00000540010 OR51B6Q9H340 312 aa9.05□□□□□ -0.96
TRAF1-202ENST00000540010 UCK1Q9HA47 277 aa9.05□□□□□ -0.96
TRAF1-202ENST00000540010 IDSB3KWA1 339 aa9.04□□□□□ -0.96
TRAF1-202ENST00000540010 PMS2P2O95744 297 aa9.04□□□□□ -0.96
TRAF1-202ENST00000540010 WDPCPO95876 746 aa9.04□□□□□ -0.96
TRAF1-202ENST00000540010 ACHEP22303 614 aa9.04□□□□□ -0.96
TRAF1-202ENST00000540010 ZNF93P35789 620 aaPredicted RBP9.04□□□□□ -0.96
TRAF1-202ENST00000540010 GUCA2AQ02747 115 aa9.04□□□□□ -0.96
TRAF1-202ENST00000540010 DGAT2L6Q6ZPD8 337 aa9.04□□□□□ -0.96
TRAF1-202ENST00000540010 CMIPQ8IY22 773 aa9.04□□□□□ -0.96
TRAF1-202ENST00000540010 ZNF687Q8N1G0 1237 aa9.04□□□□□ -0.96
TRAF1-202ENST00000540010 WDFY2Q96P53 400 aa9.04□□□□□ -0.96
TRAF1-202ENST00000540010 C1orf198Q9H425 327 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms