RNA–Protein interactions for RNA: ENST00000539338.6

CACNB1-206, Transcript of calcium voltage-gated channel auxiliary subunit beta 1, humanhuman

TSL 1 (best)

Gene CACNB1, Length 5,308 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB1-206ENST00000539338 Q6ZS52 159 aa13.24□□□□□ -0.29
CACNB1-206ENST00000539338 OCSTAMPQ9BR26 566 aa13.24□□□□□ -0.29
CACNB1-206ENST00000539338 PIGQQ9BRB3 760 aa13.24□□□□□ -0.29
CACNB1-206ENST00000539338 OR2W5A6NFC9 320 aa13.24□□□□□ -0.29
CACNB1-206ENST00000539338 PHF1O43189 567 aaPredicted RBP13.24□□□□□ -0.29
CACNB1-206ENST00000539338 UBE2MP61081 183 aaKnown RBP13.24□□□□□ -0.29
CACNB1-206ENST00000539338 PHLDA2Q53GA4 152 aa13.24□□□□□ -0.29
CACNB1-206ENST00000539338 TMEM81Q6P7N7 255 aa13.24□□□□□ -0.29
CACNB1-206ENST00000539338 CPNE4Q96A23 557 aaPredicted RBP13.24□□□□□ -0.29
CACNB1-206ENST00000539338 SLC19A3Q9BZV2 496 aa13.24□□□□□ -0.29
CACNB1-206ENST00000539338 FAM212BQ9NTI7 297 aaPredicted RBP13.24□□□□□ -0.29
CACNB1-206ENST00000539338 CHRNA9Q9UGM1 479 aa13.24□□□□□ -0.29
CACNB1-206ENST00000539338 KIF25Q9UIL4 384 aa13.24□□□□□ -0.29
CACNB1-206ENST00000539338 EIF1BO60739 113 aaKnown RBP13.24□□□□□ -0.29
CACNB1-206ENST00000539338 IGHV3-9P01782 118 aa13.24□□□□□ -0.29
CACNB1-206ENST00000539338 ETV6P41212 452 aa13.24□□□□□ -0.29
CACNB1-206ENST00000539338 YBX1P67809 324 aaKnown RBP13.24□□□□□ -0.29
CACNB1-206ENST00000539338 KANSL1Q7Z3B3 1105 aa13.24□□□□□ -0.29
CACNB1-206ENST00000539338 FLVCR2Q9UPI3 526 aa13.24□□□□□ -0.29
CACNB1-206ENST00000539338 FER1L6Q2WGJ9 1857 aa13.24□□□□□ -0.29
CACNB1-206ENST00000539338 GMDSO60547 372 aa13.24□□□□□ -0.29
CACNB1-206ENST00000539338 ICOSLGO75144 302 aa13.24□□□□□ -0.29
CACNB1-206ENST00000539338 CLPPQ16740 277 aaPredicted RBP13.24□□□□□ -0.29
CACNB1-206ENST00000539338 FAM27D1Q5T7N8 215 aa13.24□□□□□ -0.29
CACNB1-206ENST00000539338 AGBL4Q5VU57 503 aa13.24□□□□□ -0.29
CACNB1-206ENST00000539338 USP51Q70EK9 711 aa13.24□□□□□ -0.29
CACNB1-206ENST00000539338 ADGRF3Q8IZF5 1079 aa13.24□□□□□ -0.29
CACNB1-206ENST00000539338 EXD3Q8N9H8 876 aa13.24□□□□□ -0.29
CACNB1-206ENST00000539338 TIMD4Q96H15 378 aa13.24□□□□□ -0.29
CACNB1-206ENST00000539338 LINC00615Q96LM1 132 aaPredicted RBP13.24□□□□□ -0.29
CACNB1-206ENST00000539338 TCEAL2Q9H3H9 227 aaPredicted RBP13.24□□□□□ -0.29
CACNB1-206ENST00000539338 CDCP1Q9H5V8 836 aa13.24□□□□□ -0.29
CACNB1-206ENST00000539338 SERTAD4Q9NUC0 356 aa13.24□□□□□ -0.29
CACNB1-206ENST00000539338 ING1Q9UK53 422 aaPredicted RBP13.24□□□□□ -0.29
CACNB1-206ENST00000539338 RPP30P78346 268 aaKnown RBP13.23□□□□□ -0.29
CACNB1-206ENST00000539338 MRPS34P82930 218 aaKnown RBP13.23□□□□□ -0.29
CACNB1-206ENST00000539338 HSF1Q00613 529 aa13.23□□□□□ -0.29
CACNB1-206ENST00000539338 NKAIN1Q4KMZ8 207 aa13.23□□□□□ -0.29
CACNB1-206ENST00000539338 SHEQ5VZ18 495 aa13.23□□□□□ -0.29
CACNB1-206ENST00000539338 CMTM4Q8IZR5 234 aa13.23□□□□□ -0.29
CACNB1-206ENST00000539338 SUMF1Q8NBK3 374 aa13.23□□□□□ -0.29
CACNB1-206ENST00000539338 SPNP16150 400 aa13.23□□□□□ -0.29
CACNB1-206ENST00000539338 RAD52P43351 418 aa13.23□□□□□ -0.29
CACNB1-206ENST00000539338 CSRP2Q16527 193 aa13.23□□□□□ -0.29
CACNB1-206ENST00000539338 HSD17B11Q8NBQ5 300 aa13.23□□□□□ -0.29
CACNB1-206ENST00000539338 GJC3Q8NFK1 279 aa13.23□□□□□ -0.29
CACNB1-206ENST00000539338 OR10R2Q8NGX6 335 aa13.23□□□□□ -0.29
CACNB1-206ENST00000539338 OR51E1Q8TCB6 317 aa13.23□□□□□ -0.29
CACNB1-206ENST00000539338 CA5BP1Q8WTZ4 195 aa13.23□□□□□ -0.29
CACNB1-206ENST00000539338 RBMXL1Q96E39 390 aaKnown RBP13.23□□□□□ -0.29
CACNB1-206ENST00000539338 E9PI62 339 aa13.23□□□□□ -0.29
CACNB1-206ENST00000539338 TPPPO94811 219 aa13.23□□□□□ -0.29
CACNB1-206ENST00000539338 HNF1AP20823 631 aa13.23□□□□□ -0.29
CACNB1-206ENST00000539338 ACHEP22303 614 aa13.23□□□□□ -0.29
CACNB1-206ENST00000539338 TMEM196Q5HYL7 178 aa13.23□□□□□ -0.29
CACNB1-206ENST00000539338 VHLLQ6RSH7 139 aa13.23□□□□□ -0.29
CACNB1-206ENST00000539338 TMEM217Q8N7C4 229 aa13.23□□□□□ -0.29
CACNB1-206ENST00000539338 RNF141Q8WVD5 230 aa13.23□□□□□ -0.29
CACNB1-206ENST00000539338 HAO2Q9NYQ3 351 aa13.23□□□□□ -0.29
CACNB1-206ENST00000539338 COL5A3P25940 1745 aaPredicted RBP13.23□□□□□ -0.29
CACNB1-206ENST00000539338 RPA2P15927 270 aa13.23□□□□□ -0.29
CACNB1-206ENST00000539338 RAE1P78406 368 aaKnown RBP13.23□□□□□ -0.29
CACNB1-206ENST00000539338 CAMK2BQ13554 666 aa13.23□□□□□ -0.29
CACNB1-206ENST00000539338 FHL5Q5TD97 284 aa13.23□□□□□ -0.29
CACNB1-206ENST00000539338 FJX1Q86VR8 437 aa13.23□□□□□ -0.29
CACNB1-206ENST00000539338 SP7Q8TDD2 431 aaPredicted RBP13.23□□□□□ -0.29
CACNB1-206ENST00000539338 ATPIF1Q9UII2 106 aa13.23□□□□□ -0.29
CACNB1-206ENST00000539338 ZNF705FA8MVS1 300 aaPredicted RBP13.22□□□□□ -0.29
CACNB1-206ENST00000539338 NRG2O14511 850 aaPredicted RBP13.22□□□□□ -0.29
CACNB1-206ENST00000539338 TOR1AO14656 332 aa13.22□□□□□ -0.29
CACNB1-206ENST00000539338 ICMTO60725 284 aa13.22□□□□□ -0.29
CACNB1-206ENST00000539338 LALBAP00709 142 aa13.22□□□□□ -0.29
CACNB1-206ENST00000539338 ZNF705DP0CH99 300 aaPredicted RBP13.22□□□□□ -0.29
CACNB1-206ENST00000539338 ZNF705BP0CI00 300 aaPredicted RBP13.22□□□□□ -0.29
CACNB1-206ENST00000539338 MSMO1Q15800 293 aa13.22□□□□□ -0.29
CACNB1-206ENST00000539338 TMEM200AQ86VY9 491 aa13.22□□□□□ -0.29
CACNB1-206ENST00000539338 KLHDC8BQ8IXV7 354 aa13.22□□□□□ -0.29
CACNB1-206ENST00000539338 HMGCLL1Q8TB92 370 aa13.22□□□□□ -0.29
CACNB1-206ENST00000539338 ST7LQ8TDW4 575 aa13.22□□□□□ -0.29
CACNB1-206ENST00000539338 AP1S3Q96PC3 154 aa13.22□□□□□ -0.29
CACNB1-206ENST00000539338 SPACA5Q96QH8 159 aa13.22□□□□□ -0.29
CACNB1-206ENST00000539338 PTDSS2Q9BVG9 487 aa13.22□□□□□ -0.29
CACNB1-206ENST00000539338 ISYNA1Q9NPH2 558 aa13.22□□□□□ -0.29
CACNB1-206ENST00000539338 TMEM235A6NFC5 223 aa13.22□□□□□ -0.29
CACNB1-206ENST00000539338 CDK5R1Q15078 307 aa13.22□□□□□ -0.29
CACNB1-206ENST00000539338 XAF1Q6GPH4 301 aa13.22□□□□□ -0.29
CACNB1-206ENST00000539338 LIMS2Q7Z4I7 341 aa13.22□□□□□ -0.29
CACNB1-206ENST00000539338 ARIH2OSQ8N7S6 290 aa13.22□□□□□ -0.29
CACNB1-206ENST00000539338 SMIM19Q96E16 107 aa13.22□□□□□ -0.29
CACNB1-206ENST00000539338 A0A0A6YYD5 115 aa13.22□□□□□ -0.29
CACNB1-206ENST00000539338 A0A1W2PNR3 127 aa13.22□□□□□ -0.29
CACNB1-206ENST00000539338 ANKRD34BA5PLL1 514 aa13.22□□□□□ -0.29
CACNB1-206ENST00000539338 TUSC2O75896 110 aa13.22□□□□□ -0.29
CACNB1-206ENST00000539338 WNT11O96014 354 aa13.22□□□□□ -0.29
CACNB1-206ENST00000539338 GABRB1P18505 474 aa13.22□□□□□ -0.29
CACNB1-206ENST00000539338 UBE2KP61086 200 aa13.22□□□□□ -0.29
CACNB1-206ENST00000539338 TPBGQ13641 420 aa13.22□□□□□ -0.29
CACNB1-206ENST00000539338 KIAA0040Q15053 153 aa13.22□□□□□ -0.29
CACNB1-206ENST00000539338 OR52W1Q6IF63 320 aa13.22□□□□□ -0.29
CACNB1-206ENST00000539338 LIPHQ8WWY8 451 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 436.3 ms