RNA–Protein interactions for RNA: ENST00000538120.5

CLIP1-210, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 2,472 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-210ENST00000538120 KDM8Q8N371 416 aa9.62□□□□□ -0.87
CLIP1-210ENST00000538120 FTMTQ8N4E7 242 aa9.62□□□□□ -0.87
CLIP1-210ENST00000538120 SLC22A8Q8TCC7 542 aa9.62□□□□□ -0.87
CLIP1-210ENST00000538120 RHBDD1Q8TEB9 315 aa9.62□□□□□ -0.87
CLIP1-210ENST00000538120 SPACA9Q96E40 222 aaPredicted RBP9.62□□□□□ -0.87
CLIP1-210ENST00000538120 ADAD1Q96M93 576 aaKnown RBP9.62□□□□□ -0.87
CLIP1-210ENST00000538120 PDCD1LG2Q9BQ51 273 aa9.62□□□□□ -0.87
CLIP1-210ENST00000538120 CLEC4MQ9H2X3 399 aaPredicted RBP9.62□□□□□ -0.87
CLIP1-210ENST00000538120 VSX1Q9NZR4 365 aaPredicted RBP9.62□□□□□ -0.87
CLIP1-210ENST00000538120 PPP4R1LQ9P1A2 415 aa9.62□□□□□ -0.87
CLIP1-210ENST00000538120 UBQLN2Q9UHD9 624 aa9.62□□□□□ -0.87
CLIP1-210ENST00000538120 WIF1Q9Y5W5 379 aa9.62□□□□□ -0.87
CLIP1-210ENST00000538120 ZNF208O43345 1280 aa9.62□□□□□ -0.87
CLIP1-210ENST00000538120 OR8G3PP0DMU2 310 aa9.62□□□□□ -0.87
CLIP1-210ENST00000538120 EPXP11678 715 aa9.62□□□□□ -0.87
CLIP1-210ENST00000538120 ALOX5APP20292 161 aa9.62□□□□□ -0.87
CLIP1-210ENST00000538120 IL32P24001 234 aa9.62□□□□□ -0.87
CLIP1-210ENST00000538120 MSX1P28360 303 aa9.62□□□□□ -0.87
CLIP1-210ENST00000538120 CCKBRP32239 447 aa9.62□□□□□ -0.87
CLIP1-210ENST00000538120 RPS27P42677 84 aaKnown RBP9.62□□□□□ -0.87
CLIP1-210ENST00000538120 CBX5P45973 191 aa9.62□□□□□ -0.87
CLIP1-210ENST00000538120 ZP4Q12836 540 aa9.62□□□□□ -0.87
CLIP1-210ENST00000538120 IKZF1Q13422 519 aa9.62□□□□□ -0.87
CLIP1-210ENST00000538120 KLF9Q13886 244 aaPredicted RBP9.62□□□□□ -0.87
CLIP1-210ENST00000538120 PLPPR5Q32ZL2 321 aa9.62□□□□□ -0.87
CLIP1-210ENST00000538120 OTPQ5XKR4 325 aa9.62□□□□□ -0.87
CLIP1-210ENST00000538120 TPRA1Q86W33 373 aa9.62□□□□□ -0.87
CLIP1-210ENST00000538120 GALNT11Q8NCW6 608 aa9.62□□□□□ -0.87
CLIP1-210ENST00000538120 OR2Y1Q8NGV0 311 aa9.62□□□□□ -0.87
CLIP1-210ENST00000538120 MFSD8Q8NHS3 518 aa9.62□□□□□ -0.87
CLIP1-210ENST00000538120 RGP1Q92546 391 aaPredicted RBP9.62□□□□□ -0.87
CLIP1-210ENST00000538120 DERL3Q96Q80 235 aa9.62□□□□□ -0.87
CLIP1-210ENST00000538120 C20orf85Q9H1P6 137 aa9.62□□□□□ -0.87
CLIP1-210ENST00000538120 METTL7AQ9H8H3 244 aa9.62□□□□□ -0.87
CLIP1-210ENST00000538120 CHCHD2Q9Y6H1 151 aaPredicted RBP9.62□□□□□ -0.87
CLIP1-210ENST00000538120 WDR87Q6ZQQ6 2873 aa9.62□□□□□ -0.87
CLIP1-210ENST00000538120 IGLV1-36A0A0B4J1U3 117 aa9.61□□□□□ -0.87
CLIP1-210ENST00000538120 TRAV1-2A0A0B4J238 106 aa9.61□□□□□ -0.87
CLIP1-210ENST00000538120 PMS2P1A4D2B8 440 aa9.61□□□□□ -0.87
CLIP1-210ENST00000538120 PIN1P1O15428 100 aa9.61□□□□□ -0.87
CLIP1-210ENST00000538120 ITGA10O75578 1167 aa9.61□□□□□ -0.87
CLIP1-210ENST00000538120 RGS11O94810 467 aa9.61□□□□□ -0.87
CLIP1-210ENST00000538120 IFNA7P01567 189 aa9.61□□□□□ -0.87
CLIP1-210ENST00000538120 UCHL1P09936 223 aa9.61□□□□□ -0.87
CLIP1-210ENST00000538120 RRASP10301 218 aa9.61□□□□□ -0.87
CLIP1-210ENST00000538120 PTHLHP12272 177 aa9.61□□□□□ -0.87
CLIP1-210ENST00000538120 TMEM11P17152 192 aa9.61□□□□□ -0.87
CLIP1-210ENST00000538120 CTRB1P17538 263 aa9.61□□□□□ -0.87
CLIP1-210ENST00000538120 GDNFP39905 211 aa9.61□□□□□ -0.87
CLIP1-210ENST00000538120 MAGEB1P43366 347 aa9.61□□□□□ -0.87
CLIP1-210ENST00000538120 MELKQ14680 651 aa9.61□□□□□ -0.87
CLIP1-210ENST00000538120 OR7A5Q15622 319 aa9.61□□□□□ -0.87
CLIP1-210ENST00000538120 ETFDHQ16134 617 aa9.61□□□□□ -0.87
CLIP1-210ENST00000538120 CTRB2Q6GPI1 263 aa9.61□□□□□ -0.87
CLIP1-210ENST00000538120 FAAP20Q6NZ36 180 aa9.61□□□□□ -0.87
CLIP1-210ENST00000538120 CDH24Q86UP0 819 aa9.61□□□□□ -0.87
CLIP1-210ENST00000538120 OR2M3Q8NG83 312 aa9.61□□□□□ -0.87
CLIP1-210ENST00000538120 OR11G2Q8NGC1 345 aa9.61□□□□□ -0.87
CLIP1-210ENST00000538120 AMELYQ99218 206 aa9.61□□□□□ -0.87
CLIP1-210ENST00000538120 ZNF436Q9C0F3 470 aaPredicted RBP9.61□□□□□ -0.87
CLIP1-210ENST00000538120 OR10A4Q9H209 315 aa9.61□□□□□ -0.87
CLIP1-210ENST00000538120 EMC3Q9P0I2 261 aa9.61□□□□□ -0.87
CLIP1-210ENST00000538120 SCP2D1Q9UJQ7 156 aa9.61□□□□□ -0.87
CLIP1-210ENST00000538120 FBXL2Q9UKC9 423 aa9.61□□□□□ -0.87
CLIP1-210ENST00000538120 FKBP7Q9Y680 259 aa9.61□□□□□ -0.87
CLIP1-210ENST00000538120 WDFY4Q6ZS81 3184 aa9.61□□□□□ -0.87
CLIP1-210ENST00000538120 LNP1A1A4G5 178 aa9.61□□□□□ -0.87
CLIP1-210ENST00000538120 SLC22A23A1A5C7 686 aa9.61□□□□□ -0.87
CLIP1-210ENST00000538120 C9J4A7 227 aa9.61□□□□□ -0.87
CLIP1-210ENST00000538120 XKRYO14609 159 aa9.61□□□□□ -0.87
CLIP1-210ENST00000538120 OR6A2O95222 327 aa9.61□□□□□ -0.87
CLIP1-210ENST00000538120 SERPINA3P01011 423 aa9.61□□□□□ -0.87
CLIP1-210ENST00000538120 VEGFCP49767 419 aa9.61□□□□□ -0.87
CLIP1-210ENST00000538120 STPG1Q5TH74 334 aa9.61□□□□□ -0.87
CLIP1-210ENST00000538120 DPY19L4Q7Z388 723 aa9.61□□□□□ -0.87
CLIP1-210ENST00000538120 SERPINA12Q8IW75 414 aa9.61□□□□□ -0.87
CLIP1-210ENST00000538120 WDSUB1Q8N9V3 476 aa9.61□□□□□ -0.87
CLIP1-210ENST00000538120 OR6N2Q8NGY6 317 aa9.61□□□□□ -0.87
CLIP1-210ENST00000538120 M1APQ8TC57 530 aa9.61□□□□□ -0.87
CLIP1-210ENST00000538120 LGALS14Q8TCE9 139 aa9.61□□□□□ -0.87
CLIP1-210ENST00000538120 SGK3Q96BR1 496 aa9.61□□□□□ -0.87
CLIP1-210ENST00000538120 MRPL48Q96GC5 212 aaKnown RBP9.61□□□□□ -0.87
CLIP1-210ENST00000538120 FOXN4Q96NZ1 517 aa9.61□□□□□ -0.87
CLIP1-210ENST00000538120 OR14A2Q96R54 314 aa9.61□□□□□ -0.87
CLIP1-210ENST00000538120 INTS14Q96SY0 518 aa9.61□□□□□ -0.87
CLIP1-210ENST00000538120 POTEKPQ9BYX7 375 aa9.61□□□□□ -0.87
CLIP1-210ENST00000538120 TSPAN10Q9H1Z9 355 aaPredicted RBP9.61□□□□□ -0.87
CLIP1-210ENST00000538120 ZCCHC4Q9H5U6 513 aa9.61□□□□□ -0.87
CLIP1-210ENST00000538120 MRPL22Q9NWU5 206 aaKnown RBP9.61□□□□□ -0.87
CLIP1-210ENST00000538120 ING1Q9UK53 422 aaPredicted RBP9.61□□□□□ -0.87
CLIP1-210ENST00000538120 RCE1Q9Y256 329 aa9.61□□□□□ -0.87
CLIP1-210ENST00000538120 CFAP54Q96N23 3096 aa9.61□□□□□ -0.87
CLIP1-210ENST00000538120 CPAMD8Q8IZJ3 1885 aa9.61□□□□□ -0.87
CLIP1-210ENST00000538120 LIPT2A6NK58 231 aa9.6□□□□□ -0.87
CLIP1-210ENST00000538120 GATBO75879 557 aaKnown RBP9.6□□□□□ -0.87
CLIP1-210ENST00000538120 ZFPL1O95159 310 aa9.6□□□□□ -0.87
CLIP1-210ENST00000538120 CTLA4P16410 223 aa9.6□□□□□ -0.87
CLIP1-210ENST00000538120 CLDN6P56747 220 aa9.6□□□□□ -0.87
CLIP1-210ENST00000538120 STK11Q15831 433 aa9.6□□□□□ -0.87
CLIP1-210ENST00000538120 LIPNQ5VXI9 398 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms