RNA–Protein interactions for RNA: ENST00000536710.1

PRKDC-208, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 4

Gene PRKDC, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-208ENST00000536710 RBAKQ9NYW8 714 aaPredicted RBP3.52□□□□□ -1.85
PRKDC-208ENST00000536710 MYEF2Q9P2K5 600 aaKnown RBP3.52□□□□□ -1.85
PRKDC-208ENST00000536710 OR12D3Q9UGF7 316 aa3.52□□□□□ -1.85
PRKDC-208ENST00000536710 PSG8Q9UQ74 426 aa3.52□□□□□ -1.85
PRKDC-208ENST00000536710 WDR62O43379 1518 aa3.51□□□□□ -1.85
PRKDC-208ENST00000536710 KCNE1BA0A087WTH5 132 aa3.51□□□□□ -1.85
PRKDC-208ENST00000536710 H0YC42 278 aa3.51□□□□□ -1.85
PRKDC-208ENST00000536710 SLC9A3R1O14745 358 aaPredicted RBP3.51□□□□□ -1.85
PRKDC-208ENST00000536710 AKR7A2O43488 359 aa3.51□□□□□ -1.85
PRKDC-208ENST00000536710 RAD51CO43502 376 aa3.51□□□□□ -1.85
PRKDC-208ENST00000536710 ANGPTL7O43827 346 aa3.51□□□□□ -1.85
PRKDC-208ENST00000536710 FCN3O75636 299 aa3.51□□□□□ -1.85
PRKDC-208ENST00000536710 FLOT1O75955 427 aa3.51□□□□□ -1.85
PRKDC-208ENST00000536710 CD160O95971 181 aa3.51□□□□□ -1.85
PRKDC-208ENST00000536710 HLA-DPB1P04440 258 aa3.51□□□□□ -1.85
PRKDC-208ENST00000536710 EIF4EP06730 217 aaKnown RBP3.51□□□□□ -1.85
PRKDC-208ENST00000536710 CLTAP09496 248 aa3.51□□□□□ -1.85
PRKDC-208ENST00000536710 CT45A6P0DMU7 189 aa3.51□□□□□ -1.85
PRKDC-208ENST00000536710 CT45A5P0DMU8 189 aa3.51□□□□□ -1.85
PRKDC-208ENST00000536710 CT45A7P0DMV0 189 aa3.51□□□□□ -1.85
PRKDC-208ENST00000536710 WARSP23381 471 aaKnown RBP3.51□□□□□ -1.85
PRKDC-208ENST00000536710 RAB7AP51149 207 aa3.51□□□□□ -1.85
PRKDC-208ENST00000536710 ZNF138P52744 262 aa3.51□□□□□ -1.85
PRKDC-208ENST00000536710 UBE2MP61081 183 aaKnown RBP3.51□□□□□ -1.85
PRKDC-208ENST00000536710 IRF8Q02556 426 aa3.51□□□□□ -1.85
PRKDC-208ENST00000536710 ERCC8Q13216 396 aa3.51□□□□□ -1.85
PRKDC-208ENST00000536710 MADCAM1Q13477 382 aa3.51□□□□□ -1.85
PRKDC-208ENST00000536710 CAPRIN1Q14444 709 aaKnown RBP3.51□□□□□ -1.85
PRKDC-208ENST00000536710 RGNQ15493 299 aa3.51□□□□□ -1.85
PRKDC-208ENST00000536710 CT45A1Q5HYN5 189 aa3.51□□□□□ -1.85
PRKDC-208ENST00000536710 PIP5KL1Q5T9C9 394 aa3.51□□□□□ -1.85
PRKDC-208ENST00000536710 GPR107Q5VW38 600 aa3.51□□□□□ -1.85
PRKDC-208ENST00000536710 PLCXD3Q63HM9 321 aa3.51□□□□□ -1.85
PRKDC-208ENST00000536710 ARL9Q6T311 187 aa3.51□□□□□ -1.85
PRKDC-208ENST00000536710 PLET1Q6UQ28 207 aa3.51□□□□□ -1.85
PRKDC-208ENST00000536710 LINC01551Q86U37 167 aa3.51□□□□□ -1.85
PRKDC-208ENST00000536710 ENTHD1Q8IYW4 607 aa3.51□□□□□ -1.85
PRKDC-208ENST00000536710 Q8N976 141 aa3.51□□□□□ -1.85
PRKDC-208ENST00000536710 FAM184AQ8NB25 1140 aa3.51□□□□□ -1.85
PRKDC-208ENST00000536710 CT45A3Q8NHU0 189 aa3.51□□□□□ -1.85
PRKDC-208ENST00000536710 PIGUQ9H490 435 aa3.51□□□□□ -1.85
PRKDC-208ENST00000536710 NOX3Q9HBY0 568 aa3.51□□□□□ -1.85
PRKDC-208ENST00000536710 SLC40A1Q9NP59 571 aa3.51□□□□□ -1.85
PRKDC-208ENST00000536710 KCNE3Q9Y6H6 103 aa3.51□□□□□ -1.85
PRKDC-208ENST00000536710 LTBP1Q14766 1721 aa3.5□□□□□ -1.85
PRKDC-208ENST00000536710 CROCCQ5TZA2 2017 aa3.5□□□□□ -1.85
PRKDC-208ENST00000536710 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.5□□□□□ -1.85
PRKDC-208ENST00000536710 A0A096LNJ9 63 aa3.5□□□□□ -1.85
PRKDC-208ENST00000536710 IGHV3-74A0A0B4J1X5 117 aa3.5□□□□□ -1.85
PRKDC-208ENST00000536710 A0A1B0GTQ1 180 aa3.5□□□□□ -1.85
PRKDC-208ENST00000536710 SPAG7O75391 227 aa3.5□□□□□ -1.85
PRKDC-208ENST00000536710 SLC25A14O95258 325 aaPredicted RBP3.5□□□□□ -1.85
PRKDC-208ENST00000536710 HLA-HP01893 362 aa3.5□□□□□ -1.85
PRKDC-208ENST00000536710 IFNW1P05000 195 aa3.5□□□□□ -1.85
PRKDC-208ENST00000536710 UBTFL6P0CB48 400 aaPredicted RBP3.5□□□□□ -1.85
PRKDC-208ENST00000536710 LONP1P36776 959 aaKnown RBP3.5□□□□□ -1.85
PRKDC-208ENST00000536710 CSNK1A1P48729 337 aa3.5□□□□□ -1.85
PRKDC-208ENST00000536710 MECOMQ03112 1051 aa3.5□□□□□ -1.85
PRKDC-208ENST00000536710 IFT88Q13099 833 aa3.5□□□□□ -1.85
PRKDC-208ENST00000536710 BEX5Q5H9J7 111 aa3.5□□□□□ -1.85
PRKDC-208ENST00000536710 TPTE2P1Q5T6R2 138 aa3.5□□□□□ -1.85
PRKDC-208ENST00000536710 AGBL2Q5U5Z8 902 aa3.5□□□□□ -1.85
PRKDC-208ENST00000536710 UBE2UQ5VVX9 321 aa3.5□□□□□ -1.85
PRKDC-208ENST00000536710 METTL21CQ5VZV1 264 aa3.5□□□□□ -1.85
PRKDC-208ENST00000536710 SNX31Q8N9S9 440 aa3.5□□□□□ -1.85
PRKDC-208ENST00000536710 OR52E5Q8NH55 327 aa3.5□□□□□ -1.85
PRKDC-208ENST00000536710 OR51E1Q8TCB6 317 aa3.5□□□□□ -1.85
PRKDC-208ENST00000536710 CA5BP1Q8WTZ4 195 aa3.5□□□□□ -1.85
PRKDC-208ENST00000536710 NTAN1Q96AB6 310 aa3.5□□□□□ -1.85
PRKDC-208ENST00000536710 TM4SF18Q96CE8 201 aa3.5□□□□□ -1.85
PRKDC-208ENST00000536710 JSRP1Q96MG2 331 aaPredicted RBP3.5□□□□□ -1.85
PRKDC-208ENST00000536710 LINC00167Q96N53 147 aa3.5□□□□□ -1.85
PRKDC-208ENST00000536710 PARP12Q9H0J9 701 aaKnown RBP3.5□□□□□ -1.85
PRKDC-208ENST00000536710 CLSTN2Q9H4D0 955 aa3.5□□□□□ -1.85
PRKDC-208ENST00000536710 TMEM38AQ9H6F2 299 aa3.5□□□□□ -1.85
PRKDC-208ENST00000536710 NTN4Q9HB63 628 aa3.5□□□□□ -1.85
PRKDC-208ENST00000536710 MRM3Q9HC36 420 aaKnown RBP3.5□□□□□ -1.85
PRKDC-208ENST00000536710 ACP6Q9NPH0 428 aa3.5□□□□□ -1.85
PRKDC-208ENST00000536710 IGHV3-66A0A0C4DH42 116 aa3.49□□□□□ -1.85
PRKDC-208ENST00000536710 GOLGA6L7A0A1B0GV03 622 aa3.49□□□□□ -1.85
PRKDC-208ENST00000536710 L7N2F9 121 aa3.49□□□□□ -1.85
PRKDC-208ENST00000536710 CDC40O60508 579 aaKnown RBP eCLIP3.49□□□□□ -1.85
PRKDC-208ENST00000536710 HBE1P02100 147 aa3.49□□□□□ -1.85
PRKDC-208ENST00000536710 CSNK2A2P19784 350 aaPredicted RBP3.49□□□□□ -1.85
PRKDC-208ENST00000536710 U2AF2P26368 475 aaKnown RBP eCLIP3.49□□□□□ -1.853e-9■■■□□ 15.8
PRKDC-208ENST00000536710 RAP1AP62834 184 aa3.49□□□□□ -1.85
PRKDC-208ENST00000536710 RAD51Q06609 339 aa3.49□□□□□ -1.85
PRKDC-208ENST00000536710 RCAN2Q14206 197 aa3.49□□□□□ -1.85
PRKDC-208ENST00000536710 QPRTQ15274 297 aa3.49□□□□□ -1.85
PRKDC-208ENST00000536710 STUMQ69YW2 141 aa3.49□□□□□ -1.85
PRKDC-208ENST00000536710 FAM92BQ6ZTR7 304 aa3.49□□□□□ -1.85
PRKDC-208ENST00000536710 C12orf56Q8IXR9 622 aa3.49□□□□□ -1.85
PRKDC-208ENST00000536710 CBR4Q8N4T8 237 aa3.49□□□□□ -1.85
PRKDC-208ENST00000536710 Q8N9L7 120 aa3.49□□□□□ -1.85
PRKDC-208ENST00000536710 ZNF596Q8TC21 504 aa3.49□□□□□ -1.85
PRKDC-208ENST00000536710 GPX8Q8TED1 209 aa3.49□□□□□ -1.85
PRKDC-208ENST00000536710 ISG20Q96AZ6 181 aaKnown RBP3.49□□□□□ -1.85
PRKDC-208ENST00000536710 SDHCQ99643 169 aaPredicted RBP3.49□□□□□ -1.85
PRKDC-208ENST00000536710 ANKRD60Q9BZ19 345 aa3.49□□□□□ -1.85
PRKDC-208ENST00000536710 TPK1Q9H3S4 243 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms