RNA–Protein interactions for RNA: ENST00000534320.5

PHRF1-206, Transcript of PHD and ring finger domains 1, humanhuman

TSL 5

Gene PHRF1, Length 5,178 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-206ENST00000534320 TMEM59Q9BXS4 323 aa15.68■□□□□ 0.1
PHRF1-206ENST00000534320 KLHL13Q9P2N7 655 aa15.68■□□□□ 0.1
PHRF1-206ENST00000534320 NUP214P35658 2090 aaPredicted RBP15.68■□□□□ 0.1
PHRF1-206ENST00000534320 SCN10AQ9Y5Y9 1956 aa15.67■□□□□ 0.1
PHRF1-206ENST00000534320 PLXNA1Q9UIW2 1896 aa15.67■□□□□ 0.1
PHRF1-206ENST00000534320 A0A1W2PPV4 95 aa15.67■□□□□ 0.1
PHRF1-206ENST00000534320 STK17BO94768 372 aa15.67■□□□□ 0.1
PHRF1-206ENST00000534320 FCGR2AP12318 317 aa15.67■□□□□ 0.1
PHRF1-206ENST00000534320 PCBP3P57721 371 aaKnown RBP15.67■□□□□ 0.1
PHRF1-206ENST00000534320 TPBGQ13641 420 aa15.67■□□□□ 0.1
PHRF1-206ENST00000534320 ZNF628Q5EBL2 1059 aa15.67■□□□□ 0.1
PHRF1-206ENST00000534320 GRAMD2AQ8IUY3 354 aa15.67■□□□□ 0.1
PHRF1-206ENST00000534320 FAM58AQ8N1B3 248 aa15.67■□□□□ 0.1
PHRF1-206ENST00000534320 SLC22A24Q8N4F4 322 aa15.67■□□□□ 0.1
PHRF1-206ENST00000534320 OR56B1Q8NGI3 324 aa15.67■□□□□ 0.1
PHRF1-206ENST00000534320 OR5L1Q8NGL2 311 aa15.67■□□□□ 0.1
PHRF1-206ENST00000534320 SLC7A6Q92536 515 aa15.67■□□□□ 0.1
PHRF1-206ENST00000534320 FER1L6-AS2Q96M78 137 aa15.67■□□□□ 0.1
PHRF1-206ENST00000534320 SIRT3Q9NTG7 399 aaPredicted RBP15.67■□□□□ 0.1
PHRF1-206ENST00000534320 KCND3Q9UK17 655 aa15.67■□□□□ 0.1
PHRF1-206ENST00000534320 PRAMEF4O60810 478 aa15.67■□□□□ 0.1
PHRF1-206ENST00000534320 CPN1P15169 458 aa15.67■□□□□ 0.1
PHRF1-206ENST00000534320 HMGA2P52926 109 aa15.67■□□□□ 0.1
PHRF1-206ENST00000534320 TNK1Q13470 666 aa15.67■□□□□ 0.1
PHRF1-206ENST00000534320 GLYATL3Q5SZD4 288 aa15.67■□□□□ 0.1
PHRF1-206ENST00000534320 PRAMEF9Q5VWM5 478 aa15.67■□□□□ 0.1
PHRF1-206ENST00000534320 TP53TG5Q9Y2B4 290 aa15.67■□□□□ 0.1
PHRF1-206ENST00000534320 RPP30P78346 268 aaKnown RBP15.67■□□□□ 0.1
PHRF1-206ENST00000534320 XAF1Q6GPH4 301 aa15.67■□□□□ 0.1
PHRF1-206ENST00000534320 CNEP1R1Q8N9A8 125 aa15.67■□□□□ 0.1
PHRF1-206ENST00000534320 PLPP7Q8NBV4 271 aa15.67■□□□□ 0.1
PHRF1-206ENST00000534320 METTL9Q9H1A3 318 aa15.67■□□□□ 0.1
PHRF1-206ENST00000534320 MRPS28Q9Y2Q9 187 aaKnown RBP15.67■□□□□ 0.1
PHRF1-206ENST00000534320 MRPS2Q9Y399 296 aaKnown RBP15.67■□□□□ 0.1
PHRF1-206ENST00000534320 KPTNQ9Y664 436 aa15.67■□□□□ 0.1
PHRF1-206ENST00000534320 NUDT19A8MXV4 375 aa15.67■□□□□ 0.1
PHRF1-206ENST00000534320 PRSS23O95084 383 aa15.67■□□□□ 0.1
PHRF1-206ENST00000534320 C1QBP02746 253 aa15.67■□□□□ 0.1
PHRF1-206ENST00000534320 SOX18P35713 384 aa15.67■□□□□ 0.1
PHRF1-206ENST00000534320 KIR2DL1P43626 348 aaPredicted RBP15.67■□□□□ 0.1
PHRF1-206ENST00000534320 MTCP1P56278 107 aa15.67■□□□□ 0.1
PHRF1-206ENST00000534320 CTF1Q16619 201 aa15.67■□□□□ 0.1
PHRF1-206ENST00000534320 PRTGQ2VWP7 1150 aa15.67■□□□□ 0.1
PHRF1-206ENST00000534320 OR6M1Q8NGM8 313 aa15.67■□□□□ 0.1
PHRF1-206ENST00000534320 IL20Q9NYY1 176 aa15.67■□□□□ 0.1
PHRF1-206ENST00000534320 GPR55Q9Y2T6 319 aaPredicted RBP15.67■□□□□ 0.1
PHRF1-206ENST00000534320 TCRBP04435 133 aa15.66■□□□□ 0.1
PHRF1-206ENST00000534320 CASP6P55212 293 aa15.66■□□□□ 0.1
PHRF1-206ENST00000534320 C6orf15Q6UXA7 325 aaPredicted RBP15.66■□□□□ 0.1
PHRF1-206ENST00000534320 BPHLQ86WA6 291 aaPredicted RBP15.66■□□□□ 0.1
PHRF1-206ENST00000534320 KCNG3Q8TAE7 436 aa15.66■□□□□ 0.1
PHRF1-206ENST00000534320 CCDC74BQ96LY2 380 aa15.66■□□□□ 0.1
PHRF1-206ENST00000534320 TSSK2Q96PF2 358 aa15.66■□□□□ 0.1
PHRF1-206ENST00000534320 WWTR1Q9GZV5 400 aa15.66■□□□□ 0.1
PHRF1-206ENST00000534320 H7C1Q1 480 aa15.66■□□□□ 0.1
PHRF1-206ENST00000534320 ELK1P19419 428 aa15.66■□□□□ 0.1
PHRF1-206ENST00000534320 GCH1P30793 250 aa15.66■□□□□ 0.1
PHRF1-206ENST00000534320 CORO6Q6QEF8 472 aa15.66■□□□□ 0.1
PHRF1-206ENST00000534320 TMPRSS7Q7RTY8 843 aa15.66■□□□□ 0.1
PHRF1-206ENST00000534320 MKXQ8IYA7 352 aa15.66■□□□□ 0.1
PHRF1-206ENST00000534320 OR10R2Q8NGX6 335 aa15.66■□□□□ 0.1
PHRF1-206ENST00000534320 ST8SIA2Q92186 375 aa15.66■□□□□ 0.1
PHRF1-206ENST00000534320 ZG16BQ96DA0 208 aa15.66■□□□□ 0.1
PHRF1-206ENST00000534320 LOC100289279A0A1B0GTE1 492 aa15.66■□□□□ 0.1
PHRF1-206ENST00000534320 CD300LBA8K4G0 201 aa15.66■□□□□ 0.1
PHRF1-206ENST00000534320 RRADP55042 308 aa15.66■□□□□ 0.1
PHRF1-206ENST00000534320 TLE4Q04727 773 aa15.66■□□□□ 0.1
PHRF1-206ENST00000534320 OXA1LQ15070 435 aa15.66■□□□□ 0.1
PHRF1-206ENST00000534320 SULF2Q8IWU5 870 aa15.66■□□□□ 0.1
PHRF1-206ENST00000534320 NKAIN3Q8N8D7 197 aa15.66■□□□□ 0.1
PHRF1-206ENST00000534320 OR6F1Q8NGZ6 308 aa15.66■□□□□ 0.1
PHRF1-206ENST00000534320 SLC35B4Q969S0 331 aa15.66■□□□□ 0.1
PHRF1-206ENST00000534320 DCBLD2Q96PD2 775 aa15.66■□□□□ 0.1
PHRF1-206ENST00000534320 EXO1Q9UQ84 846 aaKnown RBP15.66■□□□□ 0.1
PHRF1-206ENST00000534320 B4DXG7 233 aa15.66■□□□□ 0.1
PHRF1-206ENST00000534320 MBTPS2O43462 519 aa15.66■□□□□ 0.1
PHRF1-206ENST00000534320 EFNA3P52797 238 aa15.66■□□□□ 0.1
PHRF1-206ENST00000534320 ECH1Q13011 328 aa15.66■□□□□ 0.1
PHRF1-206ENST00000534320 NPSR1Q6W5P4 371 aa15.66■□□□□ 0.1
PHRF1-206ENST00000534320 WDR88Q6ZMY6 472 aa15.66■□□□□ 0.1
PHRF1-206ENST00000534320 OR1M1Q8NGA1 313 aa15.66■□□□□ 0.1
PHRF1-206ENST00000534320 RBMXL1Q96E39 390 aaKnown RBP15.66■□□□□ 0.1
PHRF1-206ENST00000534320 PAPOLGQ9BWT3 736 aaKnown RBP15.66■□□□□ 0.1
PHRF1-206ENST00000534320 SLC22A11Q9NSA0 550 aa15.66■□□□□ 0.1
PHRF1-206ENST00000534320 A0A0B4J2A0 478 aa15.65■□□□□ 0.1
PHRF1-206ENST00000534320 CELA2BP08218 269 aaPredicted RBP15.65■□□□□ 0.1
PHRF1-206ENST00000534320 RAC2P15153 192 aa15.65■□□□□ 0.1
PHRF1-206ENST00000534320 RAB3CQ96E17 227 aa15.65■□□□□ 0.1
PHRF1-206ENST00000534320 HINT2Q9BX68 163 aa15.65■□□□□ 0.1
PHRF1-206ENST00000534320 GALNT9Q9HCQ5 603 aa15.65■□□□□ 0.1
PHRF1-206ENST00000534320 SHPKQ9UHJ6 478 aa15.65■□□□□ 0.1
PHRF1-206ENST00000534320 IGHV1OR15-9A0A0B4J2B8 117 aa15.65■□□□□ 0.1
PHRF1-206ENST00000534320 TRABD2BA6NFA1 517 aa15.65■□□□□ 0.1
PHRF1-206ENST00000534320 GPR176Q14439 515 aa15.65■□□□□ 0.1
PHRF1-206ENST00000534320 KIAA0907Q7Z7F0 614 aaPredicted RBP15.65■□□□□ 0.1
PHRF1-206ENST00000534320 GJC3Q8NFK1 279 aa15.65■□□□□ 0.1
PHRF1-206ENST00000534320 OR5D18Q8NGL1 313 aa15.65■□□□□ 0.1
PHRF1-206ENST00000534320 ZFAND1Q8TCF1 268 aa15.65■□□□□ 0.1
PHRF1-206ENST00000534320 HPSE2Q8WWQ2 592 aa15.65■□□□□ 0.1
PHRF1-206ENST00000534320 ZNF764Q96H86 408 aaPredicted RBP15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms