RNA–Protein interactions for RNA: ENST00000533492.1

CPSF1-211, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 510 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-211ENST00000533492 IER3IP1Q9Y5U9 82 aa13.16□□□□□ -0.3
CPSF1-211ENST00000533492 V9GYQ6 96 aa13.16□□□□□ -0.3
CPSF1-211ENST00000533492 TRBV4-1A0A0J9YWV2 114 aa13.15□□□□□ -0.3
CPSF1-211ENST00000533492 UNC119BA6NIH7 251 aa13.15□□□□□ -0.3
CPSF1-211ENST00000533492 FAM157AC9JC47 383 aa13.15□□□□□ -0.3
CPSF1-211ENST00000533492 CLDN25C9JDP6 229 aa13.15□□□□□ -0.3
CPSF1-211ENST00000533492 H3BSA7 217 aa13.15□□□□□ -0.3
CPSF1-211ENST00000533492 SOCS2O14508 198 aa13.15□□□□□ -0.3
CPSF1-211ENST00000533492 DOK2O60496 412 aa13.15□□□□□ -0.3
CPSF1-211ENST00000533492 SLC16A7O60669 478 aa13.15□□□□□ -0.3
CPSF1-211ENST00000533492 GAAP10253 952 aa13.15□□□□□ -0.3
CPSF1-211ENST00000533492 COX5BP10606 129 aa13.15□□□□□ -0.3
CPSF1-211ENST00000533492 ANPEPP15144 967 aa13.15□□□□□ -0.3
CPSF1-211ENST00000533492 CTLA4P16410 223 aa13.15□□□□□ -0.3
CPSF1-211ENST00000533492 OMPP47874 163 aa13.15□□□□□ -0.3
CPSF1-211ENST00000533492 HTR5AP47898 357 aa13.15□□□□□ -0.3
CPSF1-211ENST00000533492 RPS6KA3P51812 740 aa13.15□□□□□ -0.3
CPSF1-211ENST00000533492 AVPI1Q5T686 147 aa13.15□□□□□ -0.3
CPSF1-211ENST00000533492 OR51F2Q8NH61 342 aa13.15□□□□□ -0.3
CPSF1-211ENST00000533492 CCL17Q92583 94 aa13.15□□□□□ -0.3
CPSF1-211ENST00000533492 RAB1CQ92928 201 aa13.15□□□□□ -0.3
CPSF1-211ENST00000533492 MCUR1Q96AQ8 359 aa13.15□□□□□ -0.3
CPSF1-211ENST00000533492 TMEM186Q96B77 213 aa13.15□□□□□ -0.3
CPSF1-211ENST00000533492 PYURFQ96I23 114 aa13.15□□□□□ -0.3
CPSF1-211ENST00000533492 SYT4Q9H2B2 425 aa13.15□□□□□ -0.3
CPSF1-211ENST00000533492 HIF1ANQ9NWT6 349 aa13.15□□□□□ -0.3
CPSF1-211ENST00000533492 PLEK2Q9NYT0 353 aa13.15□□□□□ -0.3
CPSF1-211ENST00000533492 CGGBP1Q9UFW8 167 aaPredicted RBP13.15□□□□□ -0.3
CPSF1-211ENST00000533492 IL20RAQ9UHF4 553 aa13.15□□□□□ -0.3
CPSF1-211ENST00000533492 COA3Q9Y2R0 106 aaPredicted RBP13.15□□□□□ -0.3
CPSF1-211ENST00000533492 GRIP1Q9Y3R0 1128 aa13.15□□□□□ -0.3
CPSF1-211ENST00000533492 SVEP1Q4LDE5 3571 aa13.14□□□□□ -0.31
CPSF1-211ENST00000533492 SGCEO43556 437 aa13.14□□□□□ -0.31
CPSF1-211ENST00000533492 TIMM8AO60220 97 aaPredicted RBP13.14□□□□□ -0.31
CPSF1-211ENST00000533492 IGHV1-46P01743 117 aa13.14□□□□□ -0.31
CPSF1-211ENST00000533492 MSMBP08118 114 aa13.14□□□□□ -0.31
CPSF1-211ENST00000533492 GSTM3P21266 225 aa13.14□□□□□ -0.31
CPSF1-211ENST00000533492 LIMS1P48059 325 aa13.14□□□□□ -0.31
CPSF1-211ENST00000533492 CENPAP49450 140 aa13.14□□□□□ -0.31
CPSF1-211ENST00000533492 MMP15P51511 669 aa13.14□□□□□ -0.31
CPSF1-211ENST00000533492 LMO4P61968 165 aa13.14□□□□□ -0.31
CPSF1-211ENST00000533492 SEC23BQ15437 767 aa13.14□□□□□ -0.31
CPSF1-211ENST00000533492 KRTAP24-1Q3LI83 254 aa13.14□□□□□ -0.31
CPSF1-211ENST00000533492 ZMAT1Q5H9K5 638 aa13.14□□□□□ -0.31
CPSF1-211ENST00000533492 SAMD4BQ5PRF9 694 aaKnown RBP13.14□□□□□ -0.31
CPSF1-211ENST00000533492 THSD4Q6ZMP0 1018 aa13.14□□□□□ -0.31
CPSF1-211ENST00000533492 DPY19L2P2Q6ZN68 376 aa13.14□□□□□ -0.31
CPSF1-211ENST00000533492 ZER1Q7Z7L7 766 aa13.14□□□□□ -0.31
CPSF1-211ENST00000533492 ADCK1Q86TW2 530 aa13.14□□□□□ -0.31
CPSF1-211ENST00000533492 GLB1L2Q8IW92 636 aa13.14□□□□□ -0.31
CPSF1-211ENST00000533492 FAM86B1Q8N7N1 296 aa13.14□□□□□ -0.31
CPSF1-211ENST00000533492 LRRC37BQ96QE4 947 aa13.14□□□□□ -0.31
CPSF1-211ENST00000533492 DIRC2Q96SL1 478 aa13.14□□□□□ -0.31
CPSF1-211ENST00000533492 GPX7Q96SL4 187 aaPredicted RBP13.14□□□□□ -0.31
CPSF1-211ENST00000533492 TBCCD1Q9NVR7 557 aa13.14□□□□□ -0.31
CPSF1-211ENST00000533492 MAGEL2Q9UJ55 1249 aa13.14□□□□□ -0.31
CPSF1-211ENST00000533492 ZDHHC8Q9ULC8 765 aa13.14□□□□□ -0.31
CPSF1-211ENST00000533492 STAB1Q9NY15 2570 aa13.14□□□□□ -0.31
CPSF1-211ENST00000533492 ZSCAN5BA6NJL1 495 aa13.13□□□□□ -0.31
CPSF1-211ENST00000533492 ICMTO60725 284 aa13.13□□□□□ -0.31
CPSF1-211ENST00000533492 GADD45GO95257 159 aa13.13□□□□□ -0.31
CPSF1-211ENST00000533492 HSD17B1P14061 328 aa13.13□□□□□ -0.31
CPSF1-211ENST00000533492 TUBG1P23258 451 aa13.13□□□□□ -0.31
CPSF1-211ENST00000533492 LSM6P62312 80 aaKnown RBP13.13□□□□□ -0.31
CPSF1-211ENST00000533492 SRSF2Q01130 221 aaKnown RBP13.13□□□□□ -0.31
CPSF1-211ENST00000533492 SPIBQ01892 262 aa13.13□□□□□ -0.31
CPSF1-211ENST00000533492 SLC3A1Q07837 685 aa13.13□□□□□ -0.31
CPSF1-211ENST00000533492 AQP6Q13520 282 aa13.13□□□□□ -0.31
CPSF1-211ENST00000533492 MTX3Q5HYI7 312 aa13.13□□□□□ -0.31
CPSF1-211ENST00000533492 ACSM5Q6NUN0 579 aa13.13□□□□□ -0.31
CPSF1-211ENST00000533492 SMARCD3Q6STE5 483 aa13.13□□□□□ -0.31
CPSF1-211ENST00000533492 PEG10Q86TG7 708 aaKnown RBP13.13□□□□□ -0.31
CPSF1-211ENST00000533492 PGAM4Q8N0Y7 254 aa13.13□□□□□ -0.31
CPSF1-211ENST00000533492 RFLNBQ8N5W9 214 aa13.13□□□□□ -0.31
CPSF1-211ENST00000533492 NPEPL1Q8NDH3 523 aa13.13□□□□□ -0.31
CPSF1-211ENST00000533492 RAB39BQ96DA2 213 aa13.13□□□□□ -0.31
CPSF1-211ENST00000533492 DHRS1Q96LJ7 313 aa13.13□□□□□ -0.31
CPSF1-211ENST00000533492 NSMCE2Q96MF7 247 aa13.13□□□□□ -0.31
CPSF1-211ENST00000533492 CDRT15Q96T59 188 aa13.13□□□□□ -0.31
CPSF1-211ENST00000533492 NUAK2Q9H093 628 aa13.13□□□□□ -0.31
CPSF1-211ENST00000533492 ZNF665Q9H7R5 613 aa13.13□□□□□ -0.31
CPSF1-211ENST00000533492 MSL2Q9HCI7 577 aa13.13□□□□□ -0.31
CPSF1-211ENST00000533492 TUBG2Q9NRH3 451 aa13.13□□□□□ -0.31
CPSF1-211ENST00000533492 VSX1Q9NZR4 365 aaPredicted RBP13.13□□□□□ -0.31
CPSF1-211ENST00000533492 METRNQ9UJH8 293 aa13.13□□□□□ -0.31
CPSF1-211ENST00000533492 POLR1DQ9Y2S0 133 aa13.13□□□□□ -0.31
CPSF1-211ENST00000533492 WIPI2Q9Y4P8 454 aa13.13□□□□□ -0.31
CPSF1-211ENST00000533492 CACNG2Q9Y698 323 aa13.13□□□□□ -0.31
CPSF1-211ENST00000533492 TRAV20A0A0B4J274 112 aa13.12□□□□□ -0.31
CPSF1-211ENST00000533492 TCF21O43680 179 aa13.12□□□□□ -0.31
CPSF1-211ENST00000533492 OR10H3O60404 316 aa13.12□□□□□ -0.31
CPSF1-211ENST00000533492 MPZL1O95297 269 aa13.12□□□□□ -0.31
CPSF1-211ENST00000533492 CRABP1P29762 137 aa13.12□□□□□ -0.31
CPSF1-211ENST00000533492 MSX2P35548 267 aaPredicted RBP13.12□□□□□ -0.31
CPSF1-211ENST00000533492 CDKN2AP42771 156 aaKnown RBP13.12□□□□□ -0.31
CPSF1-211ENST00000533492 GNGT1P63211 74 aa13.12□□□□□ -0.31
CPSF1-211ENST00000533492 MXRA7P84157 204 aa13.12□□□□□ -0.31
CPSF1-211ENST00000533492 PSG7Q13046 419 aa13.12□□□□□ -0.31
CPSF1-211ENST00000533492 TMEM255AQ5JRV8 349 aa13.12□□□□□ -0.31
CPSF1-211ENST00000533492 OTPQ5XKR4 325 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms