RNA–Protein interactions for RNA: ENST00000531873.5

CD44-234, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 584 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-234ENST00000531873 MAPK8IP3Q9UPT6 1336 aa1.99□□□□□ -2.09
CD44-234ENST00000531873 IGHV3-64DA0A0J9YX35 117 aa1.99□□□□□ -2.09
CD44-234ENST00000531873 A0A1W2PPV4 95 aa1.99□□□□□ -2.09
CD44-234ENST00000531873 A0A1W2PRD5 423 aa1.99□□□□□ -2.09
CD44-234ENST00000531873 CIB4A0PJX0 185 aa1.99□□□□□ -2.09
CD44-234ENST00000531873 TMEM120BA0PK00 339 aa1.99□□□□□ -2.09
CD44-234ENST00000531873 SERPINE3A8MV23 424 aa1.99□□□□□ -2.09
CD44-234ENST00000531873 XKRYO14609 159 aa1.99□□□□□ -2.09
CD44-234ENST00000531873 KMOO15229 486 aa1.99□□□□□ -2.09
CD44-234ENST00000531873 TGM6O95932 706 aa1.99□□□□□ -2.09
CD44-234ENST00000531873 TACSTD2P09758 323 aa1.99□□□□□ -2.09
CD44-234ENST00000531873 ZDHHC11BP0C7U3 371 aa1.99□□□□□ -2.09
CD44-234ENST00000531873 CALM1P0DP23 149 aa1.99□□□□□ -2.09
CD44-234ENST00000531873 CALM2P0DP24 149 aa1.99□□□□□ -2.09
CD44-234ENST00000531873 CALM3P0DP25 149 aa1.99□□□□□ -2.09
CD44-234ENST00000531873 GGT1P19440 569 aa1.99□□□□□ -2.09
CD44-234ENST00000531873 CSNK2A2P19784 350 aaPredicted RBP1.99□□□□□ -2.09
CD44-234ENST00000531873 RAB4AP20338 218 aa1.99□□□□□ -2.09
CD44-234ENST00000531873 U2AF2P26368 475 aaKnown RBP eCLIP1.99□□□□□ -2.09
CD44-234ENST00000531873 CXCL5P42830 114 aa1.99□□□□□ -2.09
CD44-234ENST00000531873 ATP6V0D1P61421 351 aa1.99□□□□□ -2.09
CD44-234ENST00000531873 PRR3P79522 188 aaKnown RBP1.99□□□□□ -2.09
CD44-234ENST00000531873 CKAP4Q07065 602 aaKnown RBP1.99□□□□□ -2.09
CD44-234ENST00000531873 SMARCB1Q12824 385 aa1.99□□□□□ -2.09
CD44-234ENST00000531873 PTPN20Q4JDL3 420 aa1.99□□□□□ -2.09
CD44-234ENST00000531873 GPR107Q5VW38 600 aa1.99□□□□□ -2.09
CD44-234ENST00000531873 H3F3CQ6NXT2 135 aa1.99□□□□□ -2.09
CD44-234ENST00000531873 ASCL4Q6XD76 172 aa1.99□□□□□ -2.09
CD44-234ENST00000531873 STRADAQ7RTN6 431 aa1.99□□□□□ -2.09
CD44-234ENST00000531873 MRPL21Q7Z2W9 205 aaKnown RBP1.99□□□□□ -2.09
CD44-234ENST00000531873 C11orf53Q8IXP5 236 aa1.99□□□□□ -2.09
CD44-234ENST00000531873 SPAG16Q8N0X2 631 aa1.99□□□□□ -2.09
CD44-234ENST00000531873 PDCL2Q8N4E4 241 aa1.99□□□□□ -2.09
CD44-234ENST00000531873 ARRDC1Q8N5I2 433 aa1.99□□□□□ -2.09
CD44-234ENST00000531873 LINC01555Q8NAE3 123 aa1.99□□□□□ -2.09
CD44-234ENST00000531873 OR51F2Q8NH61 342 aa1.99□□□□□ -2.09
CD44-234ENST00000531873 OR4S2Q8NH73 311 aa1.99□□□□□ -2.09
CD44-234ENST00000531873 OR6X1Q8NH79 312 aa1.99□□□□□ -2.09
CD44-234ENST00000531873 LKAAEAR1Q8TD35 194 aa1.99□□□□□ -2.09
CD44-234ENST00000531873 MCOLN3Q8TDD5 553 aa1.99□□□□□ -2.09
CD44-234ENST00000531873 CD300LFQ8TDQ1 290 aa1.99□□□□□ -2.09
CD44-234ENST00000531873 CA5BP1Q8WTZ4 195 aa1.99□□□□□ -2.09
CD44-234ENST00000531873 IL22RA2Q969J5 263 aa1.99□□□□□ -2.09
CD44-234ENST00000531873 RPEQ96AT9 228 aa1.99□□□□□ -2.09
CD44-234ENST00000531873 DNAJC1Q96KC8 554 aaKnown RBP1.99□□□□□ -2.09
CD44-234ENST00000531873 CDC42EP4Q9H3Q1 356 aaKnown RBP1.99□□□□□ -2.09
CD44-234ENST00000531873 PIGUQ9H490 435 aa1.99□□□□□ -2.09
CD44-234ENST00000531873 PDFQ9HBH1 243 aa1.99□□□□□ -2.09
CD44-234ENST00000531873 CHRAC1Q9NRG0 131 aa1.99□□□□□ -2.09
CD44-234ENST00000531873 PCYOX1Q9UHG3 505 aa1.99□□□□□ -2.09
CD44-234ENST00000531873 PSG8Q9UQ74 426 aa1.99□□□□□ -2.09
CD44-234ENST00000531873 SAR1BQ9Y6B6 198 aa1.99□□□□□ -2.09
CD44-234ENST00000531873 PDS5BQ9NTI5 1447 aa1.99□□□□□ -2.09
CD44-234ENST00000531873 BRCA1P38398 1863 aaKnown RBP1.99□□□□□ -2.09
CD44-234ENST00000531873 NEURL4Q96JN8 1562 aa1.98□□□□□ -2.09
CD44-234ENST00000531873 PRRC2AP48634 2157 aaKnown RBP1.98□□□□□ -2.09
CD44-234ENST00000531873 CDC42BPBQ9Y5S2 1711 aa1.98□□□□□ -2.09
CD44-234ENST00000531873 A0A1B0GUH1 482 aa1.98□□□□□ -2.09
CD44-234ENST00000531873 A0A1B0GVY2 172 aa1.98□□□□□ -2.09
CD44-234ENST00000531873 TSPAN11A1L157 253 aa1.98□□□□□ -2.09
CD44-234ENST00000531873 H7C1H1 209 aa1.98□□□□□ -2.09
CD44-234ENST00000531873 GABRPO00591 440 aa1.98□□□□□ -2.09
CD44-234ENST00000531873 PLPP1O14494 284 aa1.98□□□□□ -2.09
CD44-234ENST00000531873 KDELR3O43731 214 aa1.98□□□□□ -2.09
CD44-234ENST00000531873 SS18L1O75177 396 aaPredicted RBP1.98□□□□□ -2.09
CD44-234ENST00000531873 LSM8O95777 96 aaKnown RBP1.98□□□□□ -2.09
CD44-234ENST00000531873 CSTAP01040 98 aa1.98□□□□□ -2.09
CD44-234ENST00000531873 KRT16P08779 473 aa1.98□□□□□ -2.09
CD44-234ENST00000531873 NR2C1P13056 603 aa1.98□□□□□ -2.09
CD44-234ENST00000531873 ATF6P18850 670 aa1.98□□□□□ -2.09
CD44-234ENST00000531873 OMGP23515 440 aa1.98□□□□□ -2.09
CD44-234ENST00000531873 GABRR2P28476 465 aa1.98□□□□□ -2.09
CD44-234ENST00000531873 RFC3P40938 356 aa1.98□□□□□ -2.09
CD44-234ENST00000531873 NMUP48645 174 aa1.98□□□□□ -2.09
CD44-234ENST00000531873 CSNK1DP48730 415 aa1.98□□□□□ -2.09
CD44-234ENST00000531873 SERPINB8P50452 374 aa1.98□□□□□ -2.09
CD44-234ENST00000531873 LHX2P50458 406 aa1.98□□□□□ -2.09
CD44-234ENST00000531873 ZNF136P52737 540 aa1.98□□□□□ -2.09
CD44-234ENST00000531873 WNT4P56705 351 aa1.98□□□□□ -2.09
CD44-234ENST00000531873 LCN2P80188 198 aa1.98□□□□□ -2.09
CD44-234ENST00000531873 SEMG2Q02383 582 aa1.98□□□□□ -2.09
CD44-234ENST00000531873 POU2AF1Q16633 256 aa1.98□□□□□ -2.09
CD44-234ENST00000531873 TMEM183BQ1AE95 376 aa1.98□□□□□ -2.09
CD44-234ENST00000531873 FAM83EQ2M2I3 478 aa1.98□□□□□ -2.09
CD44-234ENST00000531873 PIGGQ5H8A4 983 aa1.98□□□□□ -2.09
CD44-234ENST00000531873 CCNJQ5T5M9 372 aa1.98□□□□□ -2.09
CD44-234ENST00000531873 FBXW12Q6X9E4 464 aa1.98□□□□□ -2.09
CD44-234ENST00000531873 LINC00336Q6ZUF6 198 aa1.98□□□□□ -2.09
CD44-234ENST00000531873 MBOAT2Q6ZWT7 520 aa1.98□□□□□ -2.09
CD44-234ENST00000531873 H2AFVQ71UI9 128 aa1.98□□□□□ -2.09
CD44-234ENST00000531873 OAFQ86UD1 273 aa1.98□□□□□ -2.09
CD44-234ENST00000531873 ZNF547Q8IVP9 402 aa1.98□□□□□ -2.09
CD44-234ENST00000531873 TMEM183AQ8IXX5 376 aa1.98□□□□□ -2.09
CD44-234ENST00000531873 TRAM1L1Q8N609 369 aa1.98□□□□□ -2.09
CD44-234ENST00000531873 INO80EQ8NBZ0 244 aaPredicted RBP1.98□□□□□ -2.09
CD44-234ENST00000531873 CCDC54Q8NEL0 328 aa1.98□□□□□ -2.09
CD44-234ENST00000531873 OR10AD1Q8NGE0 317 aa1.98□□□□□ -2.09
CD44-234ENST00000531873 OR52E2Q8NGJ4 325 aa1.98□□□□□ -2.09
CD44-234ENST00000531873 OR51G1Q8NGK1 321 aa1.98□□□□□ -2.09
CD44-234ENST00000531873 OR4A15Q8NGL6 344 aa1.98□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms