RNA–Protein interactions for RNA: ENST00000525284.5

LRRK1-202, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best)

Gene LRRK1, Length 6,494 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-202ENST00000525284 CPMP14384 443 aa12.57□□□□□ -0.4
LRRK1-202ENST00000525284 RAD52P43351 418 aa12.57□□□□□ -0.4
LRRK1-202ENST00000525284 LRRC26Q2I0M4 334 aa12.57□□□□□ -0.4
LRRK1-202ENST00000525284 SPRYD7Q5W111 196 aa12.57□□□□□ -0.4
LRRK1-202ENST00000525284 SLC35E4Q6ICL7 350 aa12.57□□□□□ -0.4
LRRK1-202ENST00000525284 MS4A10Q96PG2 267 aa12.57□□□□□ -0.4
LRRK1-202ENST00000525284 ELOVL1Q9BW60 279 aa12.57□□□□□ -0.4
LRRK1-202ENST00000525284 MAGT1Q9H0U3 335 aa12.57□□□□□ -0.4
LRRK1-202ENST00000525284 SLIT3O75094 1523 aa12.57□□□□□ -0.4
LRRK1-202ENST00000525284 BLACEA4D250 179 aa12.57□□□□□ -0.4
LRRK1-202ENST00000525284 RAF1P04049 648 aa12.57□□□□□ -0.4
LRRK1-202ENST00000525284 SEMG1P04279 462 aa12.57□□□□□ -0.4
LRRK1-202ENST00000525284 FBP1P09467 338 aa12.57□□□□□ -0.4
LRRK1-202ENST00000525284 CCR7P32248 378 aa12.57□□□□□ -0.4
LRRK1-202ENST00000525284 CD70P32970 193 aa12.57□□□□□ -0.4
LRRK1-202ENST00000525284 MAT1AQ00266 395 aaKnown RBP12.57□□□□□ -0.4
LRRK1-202ENST00000525284 Q6ZSR6 202 aa12.57□□□□□ -0.4
LRRK1-202ENST00000525284 PPP1R3BQ86XI6 285 aa12.57□□□□□ -0.4
LRRK1-202ENST00000525284 OR52I1Q8NGK6 324 aa12.57□□□□□ -0.4
LRRK1-202ENST00000525284 XRN1Q8IZH2 1706 aaKnown RBP12.57□□□□□ -0.4
LRRK1-202ENST00000525284 FBLL1A6NHQ2 334 aaKnown RBP12.56□□□□□ -0.4
LRRK1-202ENST00000525284 TBX19O60806 448 aa12.56□□□□□ -0.4
LRRK1-202ENST00000525284 AIFM1O95831 613 aa12.56□□□□□ -0.4
LRRK1-202ENST00000525284 PTBP1P26599 531 aaKnown RBP eCLIP12.56□□□□□ -0.4
LRRK1-202ENST00000525284 RBP2P50120 134 aa12.56□□□□□ -0.4
LRRK1-202ENST00000525284 SOWAHCQ53LP3 525 aaPredicted RBP12.56□□□□□ -0.4
LRRK1-202ENST00000525284 DCXRQ7Z4W1 244 aa12.56□□□□□ -0.4
LRRK1-202ENST00000525284 OR6M1Q8NGM8 313 aa12.56□□□□□ -0.4
LRRK1-202ENST00000525284 SLC23A1Q9UHI7 598 aa12.56□□□□□ -0.4
LRRK1-202ENST00000525284 FAM87AP0C7U9 286 aa12.56□□□□□ -0.4
LRRK1-202ENST00000525284 ZNF789Q5FWF6 425 aa12.56□□□□□ -0.4
LRRK1-202ENST00000525284 GPRIN1Q7Z2K8 1008 aa12.56□□□□□ -0.4
LRRK1-202ENST00000525284 NKAIN3Q8N8D7 197 aa12.56□□□□□ -0.4
LRRK1-202ENST00000525284 C19orf47Q8N9M1 422 aaKnown RBP12.56□□□□□ -0.4
LRRK1-202ENST00000525284 MOB3AQ96BX8 217 aa12.56□□□□□ -0.4
LRRK1-202ENST00000525284 C19orf43Q9BQ61 176 aa12.56□□□□□ -0.4
LRRK1-202ENST00000525284 ESRP2Q9H6T0 727 aaKnown RBP12.56□□□□□ -0.4
LRRK1-202ENST00000525284 PSORS1C1Q9UIG5 152 aa12.56□□□□□ -0.4
LRRK1-202ENST00000525284 ZCWPW2A0A1B0GU75 182 aa12.56□□□□□ -0.4
LRRK1-202ENST00000525284 TCRBV3S1A0A5B6 114 aa12.56□□□□□ -0.4
LRRK1-202ENST00000525284 MYADML2A6NDP7 307 aa12.56□□□□□ -0.4
LRRK1-202ENST00000525284 SIRPB1O00241 398 aa12.56□□□□□ -0.4
LRRK1-202ENST00000525284 GOSR1O95249 250 aa12.56□□□□□ -0.4
LRRK1-202ENST00000525284 FECHP22830 423 aa12.56□□□□□ -0.4
LRRK1-202ENST00000525284 TACR1P25103 407 aa12.56□□□□□ -0.4
LRRK1-202ENST00000525284 SLC35A1P78382 337 aa12.56□□□□□ -0.4
LRRK1-202ENST00000525284 ZNF385BQ569K4 471 aa12.56□□□□□ -0.4
LRRK1-202ENST00000525284 ZNF595Q8IYB9 648 aa12.56□□□□□ -0.4
LRRK1-202ENST00000525284 CLRN3Q8NCR9 226 aa12.56□□□□□ -0.4
LRRK1-202ENST00000525284 ENTPD2Q9Y5L3 495 aa12.56□□□□□ -0.4
LRRK1-202ENST00000525284 ZNF487B1APH4 448 aa12.56□□□□□ -0.4
LRRK1-202ENST00000525284 ONECUT2O95948 504 aa12.56□□□□□ -0.4
LRRK1-202ENST00000525284 CLDN2P57739 230 aa12.56□□□□□ -0.4
LRRK1-202ENST00000525284 SLC16A12Q6ZSM3 486 aa12.56□□□□□ -0.4
LRRK1-202ENST00000525284 CLEC14AQ86T13 490 aa12.56□□□□□ -0.4
LRRK1-202ENST00000525284 TMEFF1Q8IYR6 380 aa12.56□□□□□ -0.4
LRRK1-202ENST00000525284 ZNF511Q8NB15 262 aa12.56□□□□□ -0.4
LRRK1-202ENST00000525284 BCL2L2Q92843 193 aaPredicted RBP12.56□□□□□ -0.4
LRRK1-202ENST00000525284 PHYHIPLQ96FC7 376 aa12.56□□□□□ -0.4
LRRK1-202ENST00000525284 COMMD5Q9GZQ3 224 aa12.56□□□□□ -0.4
LRRK1-202ENST00000525284 ZNF256Q9Y2P7 627 aaPredicted RBP12.56□□□□□ -0.4
LRRK1-202ENST00000525284 A0A0A6YYJ9 748 aa12.56□□□□□ -0.4
LRRK1-202ENST00000525284 PSMB5P28074 263 aa12.56□□□□□ -0.4
LRRK1-202ENST00000525284 RANBP10Q6VN20 620 aa12.56□□□□□ -0.4
LRRK1-202ENST00000525284 TRMT61AQ96FX7 289 aaKnown RBP12.56□□□□□ -0.4
LRRK1-202ENST00000525284 CHST6Q9GZX3 395 aa12.56□□□□□ -0.4
LRRK1-202ENST00000525284 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.56□□□□□ -0.4
LRRK1-202ENST00000525284 SPO11Q9Y5K1 396 aa12.56□□□□□ -0.4
LRRK1-202ENST00000525284 SDCBPO00560 298 aaPredicted RBP12.56□□□□□ -0.4
LRRK1-202ENST00000525284 ALPLP05186 524 aa12.56□□□□□ -0.4
LRRK1-202ENST00000525284 NAT1P18440 290 aa12.56□□□□□ -0.4
LRRK1-202ENST00000525284 BTNL3Q6UXE8 466 aa12.56□□□□□ -0.4
LRRK1-202ENST00000525284 TFAP2EQ6VUC0 442 aa12.56□□□□□ -0.4
LRRK1-202ENST00000525284 TP53RKQ96S44 253 aa12.56□□□□□ -0.4
LRRK1-202ENST00000525284 WDR61Q9GZS3 305 aaKnown RBP12.56□□□□□ -0.4
LRRK1-202ENST00000525284 KIR2DS1A0A191URI9 304 aa12.55□□□□□ -0.4
LRRK1-202ENST00000525284 FAM24AA6NFZ4 105 aa12.55□□□□□ -0.4
LRRK1-202ENST00000525284 RAB29O14966 203 aa12.55□□□□□ -0.4
LRRK1-202ENST00000525284 TOX3O15405 576 aaPredicted RBP12.55□□□□□ -0.4
LRRK1-202ENST00000525284 FUCA1P04066 466 aa12.55□□□□□ -0.4
LRRK1-202ENST00000525284 KIR2DS4P43632 304 aa12.55□□□□□ -0.4
LRRK1-202ENST00000525284 SNRPEP62304 92 aaKnown RBP12.55□□□□□ -0.4
LRRK1-202ENST00000525284 KIR2DS1Q14954 304 aa12.55□□□□□ -0.4
LRRK1-202ENST00000525284 ACY3Q96HD9 319 aa12.55□□□□□ -0.4
LRRK1-202ENST00000525284 APOOQ9BUR5 198 aa12.55□□□□□ -0.4
LRRK1-202ENST00000525284 C1QTNF6Q9BXI9 259 aa12.55□□□□□ -0.4
LRRK1-202ENST00000525284 ZNF217O75362 1048 aa12.55□□□□□ -0.4
LRRK1-202ENST00000525284 PI3P19957 117 aa12.55□□□□□ -0.4
LRRK1-202ENST00000525284 PSMB6P28072 239 aa12.55□□□□□ -0.4
LRRK1-202ENST00000525284 ACAA2P42765 397 aaKnown RBP12.55□□□□□ -0.4
LRRK1-202ENST00000525284 MFSD4AQ8N468 514 aa12.55□□□□□ -0.4
LRRK1-202ENST00000525284 C12orf42Q96LP6 360 aa12.55□□□□□ -0.4
LRRK1-202ENST00000525284 C8orf33Q9H7E9 229 aaPredicted RBP12.55□□□□□ -0.4
LRRK1-202ENST00000525284 MED17Q9NVC6 651 aa12.55□□□□□ -0.4
LRRK1-202ENST00000525284 LRP3O75074 770 aa12.55□□□□□ -0.4
LRRK1-202ENST00000525284 IGHV3-9P01782 118 aa12.55□□□□□ -0.4
LRRK1-202ENST00000525284 GALR1P47211 349 aa12.55□□□□□ -0.4
LRRK1-202ENST00000525284 ZNF140P52738 457 aaPredicted RBP12.55□□□□□ -0.4
LRRK1-202ENST00000525284 FAM3AP98173 230 aa12.55□□□□□ -0.4
LRRK1-202ENST00000525284 FOXK2Q01167 660 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms