RNA–Protein interactions for RNA: ENST00000520532.5

TRAPPC9-207, Transcript of trafficking protein particle complex 9, humanhuman

TSL 5

Gene TRAPPC9, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-207ENST00000520532 CMAHPQ9Y471 501 aa6.4□□□□□ -1.38
TRAPPC9-207ENST00000520532 AP4S1Q9Y587 144 aa6.4□□□□□ -1.38
TRAPPC9-207ENST00000520532 NIPBLQ6KC79 2804 aaeCLIP6.39□□□□□ -1.39
TRAPPC9-207ENST00000520532 OR6C68A6NDL8 312 aa6.39□□□□□ -1.39
TRAPPC9-207ENST00000520532 OR6C6A6NF89 314 aa6.39□□□□□ -1.39
TRAPPC9-207ENST00000520532 H3BN98 237 aa6.39□□□□□ -1.39
TRAPPC9-207ENST00000520532 SYNGR3O43761 229 aa6.39□□□□□ -1.39
TRAPPC9-207ENST00000520532 SOX14O95416 240 aa6.39□□□□□ -1.39
TRAPPC9-207ENST00000520532 IGHV4-39P01824 125 aa6.39□□□□□ -1.39
TRAPPC9-207ENST00000520532 MT-ND5P03915 603 aa6.39□□□□□ -1.39
TRAPPC9-207ENST00000520532 ZNF250P15622 560 aa6.39□□□□□ -1.39
TRAPPC9-207ENST00000520532 THBS4P35443 961 aa6.39□□□□□ -1.39
TRAPPC9-207ENST00000520532 LIPAP38571 399 aa6.39□□□□□ -1.39
TRAPPC9-207ENST00000520532 CDKN1AP38936 164 aa6.39□□□□□ -1.39
TRAPPC9-207ENST00000520532 GDI2P50395 445 aaKnown RBP6.39□□□□□ -1.39
TRAPPC9-207ENST00000520532 EFNA4P52798 201 aa6.39□□□□□ -1.39
TRAPPC9-207ENST00000520532 KLF3P57682 345 aaPredicted RBP6.39□□□□□ -1.39
TRAPPC9-207ENST00000520532 SELENOVP59797 346 aa6.39□□□□□ -1.39
TRAPPC9-207ENST00000520532 MRPS11P82912 194 aaKnown RBP6.39□□□□□ -1.39
TRAPPC9-207ENST00000520532 CCNIQ14094 377 aa6.39□□□□□ -1.39
TRAPPC9-207ENST00000520532 SGCAQ16586 387 aa6.39□□□□□ -1.39
TRAPPC9-207ENST00000520532 MOGQ16653 247 aa6.39□□□□□ -1.39
TRAPPC9-207ENST00000520532 PCK2Q16822 640 aa6.39□□□□□ -1.39
TRAPPC9-207ENST00000520532 CLEC12AQ5QGZ9 265 aa6.39□□□□□ -1.39
TRAPPC9-207ENST00000520532 MBNL2Q5VZF2 373 aaKnown RBP6.39□□□□□ -1.39
TRAPPC9-207ENST00000520532 KRT80Q6KB66 452 aa6.39□□□□□ -1.39
TRAPPC9-207ENST00000520532 RGS7BPQ6MZT1 257 aaPredicted RBP6.39□□□□□ -1.39
TRAPPC9-207ENST00000520532 VASH1Q7L8A9 365 aaPredicted RBP6.39□□□□□ -1.39
TRAPPC9-207ENST00000520532 OR6V1Q8N148 313 aa6.39□□□□□ -1.39
TRAPPC9-207ENST00000520532 ATG16L2Q8NAA4 619 aa6.39□□□□□ -1.39
TRAPPC9-207ENST00000520532 SLC37A3Q8NCC5 494 aa6.39□□□□□ -1.39
TRAPPC9-207ENST00000520532 PROKR2Q8NFJ6 384 aa6.39□□□□□ -1.39
TRAPPC9-207ENST00000520532 OR10H5Q8NGA6 315 aa6.39□□□□□ -1.39
TRAPPC9-207ENST00000520532 OR52E2Q8NGJ4 325 aa6.39□□□□□ -1.39
TRAPPC9-207ENST00000520532 OR4K13Q8NH42 304 aa6.39□□□□□ -1.39
TRAPPC9-207ENST00000520532 OR5K1Q8NHB7 308 aa6.39□□□□□ -1.39
TRAPPC9-207ENST00000520532 FGFBP3Q8TAT2 258 aa6.39□□□□□ -1.39
TRAPPC9-207ENST00000520532 NEU4Q8WWR8 484 aaPredicted RBP6.39□□□□□ -1.39
TRAPPC9-207ENST00000520532 CENPNQ96H22 339 aaPredicted RBP6.39□□□□□ -1.39
TRAPPC9-207ENST00000520532 DDOQ99489 341 aa6.39□□□□□ -1.39
TRAPPC9-207ENST00000520532 WNT5BQ9H1J7 359 aa6.39□□□□□ -1.39
TRAPPC9-207ENST00000520532 MS4A5Q9H3V2 200 aa6.39□□□□□ -1.39
TRAPPC9-207ENST00000520532 NTN4Q9HB63 628 aa6.39□□□□□ -1.39
TRAPPC9-207ENST00000520532 PAPOLBQ9NRJ5 636 aaKnown RBP6.39□□□□□ -1.39
TRAPPC9-207ENST00000520532 DDX28Q9NUL7 540 aaKnown RBP6.39□□□□□ -1.39
TRAPPC9-207ENST00000520532 TBCCD1Q9NVR7 557 aa6.39□□□□□ -1.39
TRAPPC9-207ENST00000520532 SLCO1C1Q9NYB5 712 aa6.39□□□□□ -1.39
TRAPPC9-207ENST00000520532 PLEK2Q9NYT0 353 aa6.39□□□□□ -1.39
TRAPPC9-207ENST00000520532 EIF3KQ9UBQ5 218 aaKnown RBP6.39□□□□□ -1.39
TRAPPC9-207ENST00000520532 ITGB1BP2Q9UKP3 347 aa6.39□□□□□ -1.39
TRAPPC9-207ENST00000520532 B9D1Q9UPM9 204 aa6.39□□□□□ -1.39
TRAPPC9-207ENST00000520532 COA3Q9Y2R0 106 aaPredicted RBP6.39□□□□□ -1.39
TRAPPC9-207ENST00000520532 POLR1DQ9Y2S0 133 aa6.39□□□□□ -1.39
TRAPPC9-207ENST00000520532 LHFPL6Q9Y693 200 aa6.39□□□□□ -1.39
TRAPPC9-207ENST00000520532 COMMD3-BMI1R4GMX3 469 aa6.39□□□□□ -1.39
TRAPPC9-207ENST00000520532 MED13LQ71F56 2210 aa6.39□□□□□ -1.39
TRAPPC9-207ENST00000520532 G3V2T6 193 aa6.38□□□□□ -1.39
TRAPPC9-207ENST00000520532 DCTN6O00399 190 aa6.38□□□□□ -1.39
TRAPPC9-207ENST00000520532 TIPRLO75663 272 aa6.38□□□□□ -1.39
TRAPPC9-207ENST00000520532 IGHV3-13P01766 116 aa6.38□□□□□ -1.39
TRAPPC9-207ENST00000520532 HMGN1P05114 100 aa6.38□□□□□ -1.39
TRAPPC9-207ENST00000520532 ADH4P08319 380 aa6.38□□□□□ -1.39
TRAPPC9-207ENST00000520532 CD99P14209 185 aa6.38□□□□□ -1.39
TRAPPC9-207ENST00000520532 SLC25A16P16260 332 aa6.38□□□□□ -1.39
TRAPPC9-207ENST00000520532 ZNF23P17027 643 aa6.38□□□□□ -1.39
TRAPPC9-207ENST00000520532 APEX1P27695 318 aaKnown RBP6.38□□□□□ -1.39
TRAPPC9-207ENST00000520532 HTR5AP47898 357 aa6.38□□□□□ -1.39
TRAPPC9-207ENST00000520532 NUDT6P53370 316 aa6.38□□□□□ -1.39
TRAPPC9-207ENST00000520532 UCP2P55851 309 aa6.38□□□□□ -1.39
TRAPPC9-207ENST00000520532 CDK5Q00535 292 aa6.38□□□□□ -1.39
TRAPPC9-207ENST00000520532 CRMP1Q14194 572 aa6.38□□□□□ -1.39
TRAPPC9-207ENST00000520532 MST1LQ2TV78 715 aa6.38□□□□□ -1.39
TRAPPC9-207ENST00000520532 PCGF3Q3KNV8 242 aa6.38□□□□□ -1.39
TRAPPC9-207ENST00000520532 KRTAP27-1Q3LI81 207 aa6.38□□□□□ -1.39
TRAPPC9-207ENST00000520532 TEX30Q5JUR7 227 aa6.38□□□□□ -1.39
TRAPPC9-207ENST00000520532 SLC35D3Q5M8T2 416 aa6.38□□□□□ -1.39
TRAPPC9-207ENST00000520532 ZNF362Q5T0B9 420 aaPredicted RBP6.38□□□□□ -1.39
TRAPPC9-207ENST00000520532 KDM4DQ6B0I6 523 aa6.38□□□□□ -1.39
TRAPPC9-207ENST00000520532 SLC18B1Q6NT16 456 aa6.38□□□□□ -1.39
TRAPPC9-207ENST00000520532 CLEC2AQ6UVW9 174 aa6.38□□□□□ -1.39
TRAPPC9-207ENST00000520532 TMEM179BQ7Z7N9 219 aa6.38□□□□□ -1.39
TRAPPC9-207ENST00000520532 BIVMQ86UB2 503 aa6.38□□□□□ -1.39
TRAPPC9-207ENST00000520532 CPEB3Q8NE35 698 aaKnown RBP6.38□□□□□ -1.39
TRAPPC9-207ENST00000520532 WFDC11Q8NEX6 87 aa6.38□□□□□ -1.39
TRAPPC9-207ENST00000520532 OR4Q3Q8NH05 313 aa6.38□□□□□ -1.39
TRAPPC9-207ENST00000520532 SNX33Q8WV41 574 aa6.38□□□□□ -1.39
TRAPPC9-207ENST00000520532 C11orf40Q8WZ69 217 aa6.38□□□□□ -1.39
TRAPPC9-207ENST00000520532 HTRA1Q92743 480 aa6.38□□□□□ -1.39
TRAPPC9-207ENST00000520532 C18orf12Q96KH6 178 aa6.38□□□□□ -1.39
TRAPPC9-207ENST00000520532 DIRC2Q96SL1 478 aa6.38□□□□□ -1.39
TRAPPC9-207ENST00000520532 ATF6BQ99941 703 aa6.38□□□□□ -1.39
TRAPPC9-207ENST00000520532 GABARAPL3Q9BY60 117 aa6.38□□□□□ -1.39
TRAPPC9-207ENST00000520532 RAB1BQ9H0U4 201 aa6.38□□□□□ -1.39
TRAPPC9-207ENST00000520532 OPA3Q9H6K4 179 aa6.38□□□□□ -1.39
TRAPPC9-207ENST00000520532 MARCH7Q9H992 704 aa6.38□□□□□ -1.39
TRAPPC9-207ENST00000520532 DYNLRB1Q9NP97 96 aa6.38□□□□□ -1.39
TRAPPC9-207ENST00000520532 EMC7Q9NPA0 242 aa6.38□□□□□ -1.39
TRAPPC9-207ENST00000520532 CYSLTR2Q9NS75 346 aa6.38□□□□□ -1.39
TRAPPC9-207ENST00000520532 KRT84Q9NSB2 600 aa6.38□□□□□ -1.39
TRAPPC9-207ENST00000520532 NKIRAS2Q9NYR9 191 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms