RNA–Protein interactions for RNA: ENST00000519664.1

SYNPO-204, Transcript of synaptopodin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNPO, Length 4,571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO-204ENST00000519664 EDAQ92838 391 aa10.63□□□□□ -0.71
SYNPO-204ENST00000519664 ARL11Q969Q4 196 aa10.63□□□□□ -0.71
SYNPO-204ENST00000519664 ACAD8Q9UKU7 415 aa10.63□□□□□ -0.71
SYNPO-204ENST00000519664 BAMBIQ13145 260 aa10.63□□□□□ -0.71
SYNPO-204ENST00000519664 C2orf76Q3KRA6 126 aa10.63□□□□□ -0.71
SYNPO-204ENST00000519664 PLCXD3Q63HM9 321 aa10.63□□□□□ -0.71
SYNPO-204ENST00000519664 FCRL6Q6DN72 434 aa10.63□□□□□ -0.71
SYNPO-204ENST00000519664 TEX261Q6UWH6 196 aa10.63□□□□□ -0.71
SYNPO-204ENST00000519664 AAED1Q7RTV5 226 aa10.63□□□□□ -0.71
SYNPO-204ENST00000519664 ST6GAL2Q96JF0 529 aa10.63□□□□□ -0.71
SYNPO-204ENST00000519664 CCNL2Q96S94 520 aaPredicted RBP10.63□□□□□ -0.71
SYNPO-204ENST00000519664 CMSS1Q9BQ75 279 aaKnown RBP10.63□□□□□ -0.71
SYNPO-204ENST00000519664 ZNF649Q9BS31 505 aa10.63□□□□□ -0.71
SYNPO-204ENST00000519664 PARP12Q9H0J9 701 aaKnown RBP10.63□□□□□ -0.71
SYNPO-204ENST00000519664 U3KQ87 197 aa10.63□□□□□ -0.71
SYNPO-204ENST00000519664 MDC1Q14676 2089 aaKnown RBP10.63□□□□□ -0.71
SYNPO-204ENST00000519664 AIPO00170 330 aa10.63□□□□□ -0.71
SYNPO-204ENST00000519664 SDCBPO00560 298 aaPredicted RBP10.63□□□□□ -0.71
SYNPO-204ENST00000519664 DPM1O60762 260 aa10.63□□□□□ -0.71
SYNPO-204ENST00000519664 GUSBP08236 651 aa10.63□□□□□ -0.71
SYNPO-204ENST00000519664 HSF1Q00613 529 aa10.63□□□□□ -0.71
SYNPO-204ENST00000519664 IFITM2Q01629 132 aa10.63□□□□□ -0.71
SYNPO-204ENST00000519664 MLC1Q15049 377 aa10.63□□□□□ -0.71
SYNPO-204ENST00000519664 PRSS53Q2L4Q9 553 aa10.63□□□□□ -0.71
SYNPO-204ENST00000519664 CD276Q5ZPR3 534 aa10.63□□□□□ -0.71
SYNPO-204ENST00000519664 C17orf107Q6ZR85 190 aa10.63□□□□□ -0.71
SYNPO-204ENST00000519664 SCGB1C1Q8TD33 95 aa10.63□□□□□ -0.71
SYNPO-204ENST00000519664 RRNAD1Q96FB5 475 aaKnown RBP10.63□□□□□ -0.71
SYNPO-204ENST00000519664 NICN1Q9BSH3 213 aa10.63□□□□□ -0.71
SYNPO-204ENST00000519664 PAPOLGQ9BWT3 736 aaKnown RBP10.63□□□□□ -0.71
SYNPO-204ENST00000519664 BARHL1Q9BZE3 327 aa10.63□□□□□ -0.71
SYNPO-204ENST00000519664 WWTR1Q9GZV5 400 aa10.63□□□□□ -0.71
SYNPO-204ENST00000519664 HRASLSQ9HDD0 168 aa10.63□□□□□ -0.71
SYNPO-204ENST00000519664 RAB6AP20340 208 aa10.62□□□□□ -0.71
SYNPO-204ENST00000519664 S100A11P31949 105 aa10.62□□□□□ -0.71
SYNPO-204ENST00000519664 LUMP51884 338 aaPredicted RBP10.62□□□□□ -0.71
SYNPO-204ENST00000519664 AADACL4Q5VUY2 407 aa10.62□□□□□ -0.71
SYNPO-204ENST00000519664 MAMSTRQ6ZN01 415 aa10.62□□□□□ -0.71
SYNPO-204ENST00000519664 OVCH1Q7RTY7 1134 aa10.62□□□□□ -0.71
SYNPO-204ENST00000519664 CLRN3Q8NCR9 226 aa10.62□□□□□ -0.71
SYNPO-204ENST00000519664 OR6M1Q8NGM8 313 aa10.62□□□□□ -0.71
SYNPO-204ENST00000519664 LILRB1Q8NHL6 650 aaPredicted RBP10.62□□□□□ -0.71
SYNPO-204ENST00000519664 ABHD1Q96SE0 405 aa10.62□□□□□ -0.71
SYNPO-204ENST00000519664 A0A0B4J2E0 115 aa10.62□□□□□ -0.71
SYNPO-204ENST00000519664 A0A1B0GX12 115 aa10.62□□□□□ -0.71
SYNPO-204ENST00000519664 STK17BO94768 372 aa10.62□□□□□ -0.71
SYNPO-204ENST00000519664 FOXL2P58012 376 aa10.62□□□□□ -0.71
SYNPO-204ENST00000519664 UBE2NP61088 152 aaKnown RBP10.62□□□□□ -0.71
SYNPO-204ENST00000519664 EXOSC2Q13868 293 aaKnown RBP10.62□□□□□ -0.71
SYNPO-204ENST00000519664 ZC3HAV1Q7Z2W4 902 aaKnown RBP10.62□□□□□ -0.71
SYNPO-204ENST00000519664 YRDCQ86U90 279 aaKnown RBP10.62□□□□□ -0.71
SYNPO-204ENST00000519664 PCDHGA5Q9Y5G8 931 aa10.62□□□□□ -0.71
SYNPO-204ENST00000519664 SERTM1A2A2V5 107 aa10.62□□□□□ -0.71
SYNPO-204ENST00000519664 TUBAL3A6NHL2 446 aa10.62□□□□□ -0.71
SYNPO-204ENST00000519664 SHOXO15266 292 aa10.62□□□□□ -0.71
SYNPO-204ENST00000519664 PPP3CBP16298 524 aa10.62□□□□□ -0.71
SYNPO-204ENST00000519664 TCN2P20062 427 aa10.62□□□□□ -0.71
SYNPO-204ENST00000519664 FAM53BQ14153 422 aa10.62□□□□□ -0.71
SYNPO-204ENST00000519664 CLLU1Q5K131 121 aa10.62□□□□□ -0.71
SYNPO-204ENST00000519664 C1QL3Q5VWW1 255 aa10.62□□□□□ -0.71
SYNPO-204ENST00000519664 COMTD1Q86VU5 262 aa10.62□□□□□ -0.71
SYNPO-204ENST00000519664 SYS1Q8N2H4 156 aa10.62□□□□□ -0.71
SYNPO-204ENST00000519664 SLC22A24Q8N4F4 322 aa10.62□□□□□ -0.71
SYNPO-204ENST00000519664 ZSCAN4Q8NAM6 433 aaPredicted RBP10.62□□□□□ -0.71
SYNPO-204ENST00000519664 GLYATL2Q8WU03 294 aa10.62□□□□□ -0.71
SYNPO-204ENST00000519664 TRMT61AQ96FX7 289 aaKnown RBP10.62□□□□□ -0.71
SYNPO-204ENST00000519664 NUDT9Q9BW91 350 aa10.62□□□□□ -0.71
SYNPO-204ENST00000519664 WBP1LQ9NX94 342 aa10.62□□□□□ -0.71
SYNPO-204ENST00000519664 CASP8AP2Q9UKL3 1982 aa10.62□□□□□ -0.71
SYNPO-204ENST00000519664 IGHV3-15A0A0B4J1V0 119 aa10.62□□□□□ -0.71
SYNPO-204ENST00000519664 TRAV20A0A0B4J274 112 aa10.62□□□□□ -0.71
SYNPO-204ENST00000519664 PRAMEF25A6NGN4 478 aa10.62□□□□□ -0.71
SYNPO-204ENST00000519664 GJE1A6NN92 205 aa10.62□□□□□ -0.71
SYNPO-204ENST00000519664 TTLL8A6PVC2 850 aa10.62□□□□□ -0.71
SYNPO-204ENST00000519664 TSTD3H0UI37 97 aa10.62□□□□□ -0.71
SYNPO-204ENST00000519664 SPINT1O43278 529 aa10.62□□□□□ -0.71
SYNPO-204ENST00000519664 OR2J2O76002 312 aa10.62□□□□□ -0.71
SYNPO-204ENST00000519664 S100PP25815 95 aa10.62□□□□□ -0.71
SYNPO-204ENST00000519664 RPS18P62269 152 aaKnown RBP10.62□□□□□ -0.71
SYNPO-204ENST00000519664 TMPRSS11FQ6ZWK6 438 aa10.62□□□□□ -0.71
SYNPO-204ENST00000519664 ZNF695Q8IW36 515 aa10.62□□□□□ -0.71
SYNPO-204ENST00000519664 MORN4Q8NDC4 146 aa10.62□□□□□ -0.71
SYNPO-204ENST00000519664 SLAMF9Q96A28 289 aa10.62□□□□□ -0.71
SYNPO-204ENST00000519664 LRRC46Q96FV0 321 aa10.62□□□□□ -0.71
SYNPO-204ENST00000519664 MOGAT1Q96PD6 335 aa10.62□□□□□ -0.71
SYNPO-204ENST00000519664 VRK1Q99986 396 aaPredicted RBP10.62□□□□□ -0.71
SYNPO-204ENST00000519664 EVA1AQ9H8M9 152 aa10.62□□□□□ -0.71
SYNPO-204ENST00000519664 ISYNA1Q9NPH2 558 aa10.62□□□□□ -0.71
SYNPO-204ENST00000519664 SCN10AQ9Y5Y9 1956 aa10.61□□□□□ -0.71
SYNPO-204ENST00000519664 A0A087WUJ7 227 aa10.61□□□□□ -0.71
SYNPO-204ENST00000519664 MRPL33O75394 65 aaKnown RBP10.61□□□□□ -0.71
SYNPO-204ENST00000519664 ADRB1P08588 477 aa10.61□□□□□ -0.71
SYNPO-204ENST00000519664 RPA2P15927 270 aa10.61□□□□□ -0.71
SYNPO-204ENST00000519664 FGF9P31371 208 aaPredicted RBP10.61□□□□□ -0.71
SYNPO-204ENST00000519664 RFC3P40938 356 aa10.61□□□□□ -0.71
SYNPO-204ENST00000519664 RFX2P48378 723 aa10.61□□□□□ -0.71
SYNPO-204ENST00000519664 OR4D6Q8NGJ1 314 aa10.61□□□□□ -0.71
SYNPO-204ENST00000519664 C3orf49Q96BT1 292 aa10.61□□□□□ -0.71
SYNPO-204ENST00000519664 ENKD1Q9H0I2 346 aa10.61□□□□□ -0.71
SYNPO-204ENST00000519664 POFUT1Q9H488 388 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms