RNA–Protein interactions for RNA: ENST00000519474.5

HDAC3-215, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-215ENST00000519474 SNAP29O95721 258 aa8.01□□□□□ -1.13
HDAC3-215ENST00000519474 SCGB1D2O95969 90 aa8.01□□□□□ -1.13
HDAC3-215ENST00000519474 CST2P09228 141 aa8.01□□□□□ -1.13
HDAC3-215ENST00000519474 T-ENOLP0DO92 83 aa8.01□□□□□ -1.13
HDAC3-215ENST00000519474 DAOP14920 347 aa8.01□□□□□ -1.13
HDAC3-215ENST00000519474 ZNF250P15622 560 aa8.01□□□□□ -1.13
HDAC3-215ENST00000519474 RPL4P36578 427 aaKnown RBP8.01□□□□□ -1.13
HDAC3-215ENST00000519474 ALDH3B1P43353 468 aa8.01□□□□□ -1.13
HDAC3-215ENST00000519474 RAP1BP61224 184 aa8.01□□□□□ -1.13
HDAC3-215ENST00000519474 ERVS71-1P61550 626 aa8.01□□□□□ -1.13
HDAC3-215ENST00000519474 RAP1AP62834 184 aa8.01□□□□□ -1.13
HDAC3-215ENST00000519474 GALK2Q01415 458 aa8.01□□□□□ -1.13
HDAC3-215ENST00000519474 RIN1Q13671 783 aa8.01□□□□□ -1.13
HDAC3-215ENST00000519474 ENDOGQ14249 297 aaKnown RBP8.01□□□□□ -1.13
HDAC3-215ENST00000519474 MAD2L1BPQ15013 274 aaPredicted RBP8.01□□□□□ -1.13
HDAC3-215ENST00000519474 CARTPTQ16568 116 aa8.01□□□□□ -1.13
HDAC3-215ENST00000519474 FAM209AQ5JX71 171 aa8.01□□□□□ -1.13
HDAC3-215ENST00000519474 SAMD4BQ5PRF9 694 aaKnown RBP8.01□□□□□ -1.13
HDAC3-215ENST00000519474 ELFN2Q5R3F8 820 aa8.01□□□□□ -1.13
HDAC3-215ENST00000519474 RGS7BPQ6MZT1 257 aaPredicted RBP8.01□□□□□ -1.13
HDAC3-215ENST00000519474 UGT2A3Q6UWM9 527 aa8.01□□□□□ -1.13
HDAC3-215ENST00000519474 DEFB107AQ8IZN7 70 aa8.01□□□□□ -1.13
HDAC3-215ENST00000519474 FITM2Q8N6M3 262 aa8.01□□□□□ -1.13
HDAC3-215ENST00000519474 OR52J3Q8NH60 311 aa8.01□□□□□ -1.13
HDAC3-215ENST00000519474 AKR7LQ8NHP1 331 aa8.01□□□□□ -1.13
HDAC3-215ENST00000519474 NSL1Q96IY1 281 aa8.01□□□□□ -1.13
HDAC3-215ENST00000519474 ZNF416Q9BWM5 594 aa8.01□□□□□ -1.13
HDAC3-215ENST00000519474 TPK1Q9H3S4 243 aa8.01□□□□□ -1.13
HDAC3-215ENST00000519474 CDH20Q9HBT6 801 aa8.01□□□□□ -1.13
HDAC3-215ENST00000519474 MYOZ1Q9NP98 299 aaPredicted RBP8.01□□□□□ -1.13
HDAC3-215ENST00000519474 NRIP3Q9NQ35 241 aa8.01□□□□□ -1.13
HDAC3-215ENST00000519474 TAAR3PQ9P1P4 343 aa8.01□□□□□ -1.13
HDAC3-215ENST00000519474 GRHPRQ9UBQ7 328 aa8.01□□□□□ -1.13
HDAC3-215ENST00000519474 SLC7A8Q9UHI5 535 aa8.01□□□□□ -1.13
HDAC3-215ENST00000519474 SAMD4AQ9UPU9 718 aaKnown RBP8.01□□□□□ -1.13
HDAC3-215ENST00000519474 TIMM10BQ9Y5J6 103 aa8.01□□□□□ -1.13
HDAC3-215ENST00000519474 IER3IP1Q9Y5U9 82 aa8.01□□□□□ -1.13
HDAC3-215ENST00000519474 FKBP7Q9Y680 259 aa8.01□□□□□ -1.13
HDAC3-215ENST00000519474 IGLV3-9A0A075B6K5 115 aa8□□□□□ -1.13
HDAC3-215ENST00000519474 PRSS37A4D1T9 235 aa8□□□□□ -1.13
HDAC3-215ENST00000519474 B2RBV5 119 aa8□□□□□ -1.13
HDAC3-215ENST00000519474 H7C1C5 153 aa8□□□□□ -1.13
HDAC3-215ENST00000519474 DCTN3O75935 186 aa8□□□□□ -1.13
HDAC3-215ENST00000519474 TSPAN9O75954 239 aa8□□□□□ -1.13
HDAC3-215ENST00000519474 NDUFB2O95178 105 aa8□□□□□ -1.13
HDAC3-215ENST00000519474 HPXP02790 462 aa8□□□□□ -1.13
HDAC3-215ENST00000519474 LCKP06239 509 aa8□□□□□ -1.13
HDAC3-215ENST00000519474 STOMP27105 288 aa8□□□□□ -1.13
HDAC3-215ENST00000519474 APLNRP35414 380 aa8□□□□□ -1.13
HDAC3-215ENST00000519474 WNT5AP41221 380 aa8□□□□□ -1.13
HDAC3-215ENST00000519474 CDKN2AP42771 156 aaKnown RBP8□□□□□ -1.13
HDAC3-215ENST00000519474 HMGA2P52926 109 aa8□□□□□ -1.13
HDAC3-215ENST00000519474 LCN6P62502 163 aa8□□□□□ -1.13
HDAC3-215ENST00000519474 MS4A2Q01362 244 aa8□□□□□ -1.13
HDAC3-215ENST00000519474 HSF2Q03933 536 aa8□□□□□ -1.13
HDAC3-215ENST00000519474 GGTLC2Q14390 218 aa8□□□□□ -1.13
HDAC3-215ENST00000519474 TBC1D28Q2M2D7 210 aa8□□□□□ -1.13
HDAC3-215ENST00000519474 MESTQ5EB52 335 aa8□□□□□ -1.13
HDAC3-215ENST00000519474 FGD3Q5JSP0 725 aa8□□□□□ -1.13
HDAC3-215ENST00000519474 C6orf52Q5T4I8 152 aa8□□□□□ -1.13
HDAC3-215ENST00000519474 FAM205BPQ63HN1 556 aa8□□□□□ -1.13
HDAC3-215ENST00000519474 SYNPRQ8TBG9 265 aa8□□□□□ -1.13
HDAC3-215ENST00000519474 BCAS4Q8TDM0 211 aa8□□□□□ -1.13
HDAC3-215ENST00000519474 C11orf40Q8WZ69 217 aa8□□□□□ -1.13
HDAC3-215ENST00000519474 MSI2Q96DH6 328 aaKnown RBP8□□□□□ -1.13
HDAC3-215ENST00000519474 MNTQ99583 582 aa8□□□□□ -1.13
HDAC3-215ENST00000519474 PIMREGQ9BSJ6 248 aa8□□□□□ -1.13
HDAC3-215ENST00000519474 SOX7Q9BT81 388 aa8□□□□□ -1.13
HDAC3-215ENST00000519474 BCL2L14Q9BZR8 327 aa8□□□□□ -1.13
HDAC3-215ENST00000519474 OR2H1Q9GZK4 316 aa8□□□□□ -1.13
HDAC3-215ENST00000519474 BPESC1Q9GZL8 116 aa8□□□□□ -1.13
HDAC3-215ENST00000519474 LRMDAQ9H2I8 198 aa8□□□□□ -1.13
HDAC3-215ENST00000519474 OR51B6Q9H340 312 aa8□□□□□ -1.13
HDAC3-215ENST00000519474 C1orf198Q9H425 327 aa8□□□□□ -1.13
HDAC3-215ENST00000519474 DYNLRB1Q9NP97 96 aa8□□□□□ -1.13
HDAC3-215ENST00000519474 CCNB1IP1Q9NPC3 277 aa8□□□□□ -1.13
HDAC3-215ENST00000519474 IL1RAPQ9NPH3 570 aa8□□□□□ -1.13
HDAC3-215ENST00000519474 C8orf4Q9NR00 106 aa8□□□□□ -1.13
HDAC3-215ENST00000519474 NKIRAS2Q9NYR9 191 aa8□□□□□ -1.13
HDAC3-215ENST00000519474 IL20RAQ9UHF4 553 aa8□□□□□ -1.13
HDAC3-215ENST00000519474 KLHL21Q9UJP4 597 aa8□□□□□ -1.13
HDAC3-215ENST00000519474 COA3Q9Y2R0 106 aaPredicted RBP8□□□□□ -1.13
HDAC3-215ENST00000519474 CHTOPQ9Y3Y2 248 aaKnown RBP8□□□□□ -1.13
HDAC3-215ENST00000519474 HIVEP2P31629 2446 aa8□□□□□ -1.13
HDAC3-215ENST00000519474 C5orf49A4QMS7 147 aa7.99□□□□□ -1.13
HDAC3-215ENST00000519474 LRP5LA4QPB2 252 aa7.99□□□□□ -1.13
HDAC3-215ENST00000519474 UNC119BA6NIH7 251 aa7.99□□□□□ -1.13
HDAC3-215ENST00000519474 M0R233 179 aa7.99□□□□□ -1.13
HDAC3-215ENST00000519474 ARPC2O15144 300 aa7.99□□□□□ -1.13
HDAC3-215ENST00000519474 LMX1BO60663 402 aa7.99□□□□□ -1.13
HDAC3-215ENST00000519474 GADD45GO95257 159 aa7.99□□□□□ -1.13
HDAC3-215ENST00000519474 MPZL1O95297 269 aa7.99□□□□□ -1.13
HDAC3-215ENST00000519474 TXNDC12O95881 172 aa7.99□□□□□ -1.13
HDAC3-215ENST00000519474 NGFP01138 241 aa7.99□□□□□ -1.13
HDAC3-215ENST00000519474 IGHV3-13P01766 116 aa7.99□□□□□ -1.13
HDAC3-215ENST00000519474 TACSTD2P09758 323 aa7.99□□□□□ -1.13
HDAC3-215ENST00000519474 NR2C1P13056 603 aa7.99□□□□□ -1.13
HDAC3-215ENST00000519474 ZNF23P17027 643 aa7.99□□□□□ -1.13
HDAC3-215ENST00000519474 ITGA2P17301 1181 aa7.99□□□□□ -1.13
HDAC3-215ENST00000519474 CCNOP22674 350 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms