RNA–Protein interactions for RNA: ENST00000513578.5

RNF4-220, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-220ENST00000513578 ACKR4Q9NPB9 350 aa7.43□□□□□ -1.22
RNF4-220ENST00000513578 NOX4Q9NPH5 578 aa7.43□□□□□ -1.22
RNF4-220ENST00000513578 CYSLTR2Q9NS75 346 aa7.43□□□□□ -1.22
RNF4-220ENST00000513578 DAPK2Q9UIK4 370 aa7.43□□□□□ -1.22
RNF4-220ENST00000513578 FOXD3Q9UJU5 478 aaPredicted RBP7.43□□□□□ -1.22
RNF4-220ENST00000513578 LRP12Q9Y561 859 aa7.43□□□□□ -1.22
RNF4-220ENST00000513578 FAM186AA6NE01 2351 aa7.43□□□□□ -1.22
RNF4-220ENST00000513578 IGKV3D-15A0A087WSY6 115 aa7.42□□□□□ -1.22
RNF4-220ENST00000513578 TRABD2BA6NFA1 517 aa7.42□□□□□ -1.22
RNF4-220ENST00000513578 ACOD1A6NK06 481 aa7.42□□□□□ -1.22
RNF4-220ENST00000513578 EIF1AYO14602 144 aaKnown RBP7.42□□□□□ -1.22
RNF4-220ENST00000513578 TNFSF11O14788 317 aa7.42□□□□□ -1.22
RNF4-220ENST00000513578 DHHO43323 396 aa7.42□□□□□ -1.22
RNF4-220ENST00000513578 TBX1O43435 398 aa7.42□□□□□ -1.22
RNF4-220ENST00000513578 TRAPPC6AO75865 159 aa7.42□□□□□ -1.22
RNF4-220ENST00000513578 NCR1O76036 304 aa7.42□□□□□ -1.22
RNF4-220ENST00000513578 ACTL6AO96019 429 aa7.42□□□□□ -1.22
RNF4-220ENST00000513578 PNPP00491 289 aa7.42□□□□□ -1.22
RNF4-220ENST00000513578 HLA-DQB1P01920 261 aa7.42□□□□□ -1.22
RNF4-220ENST00000513578 APOA1P02647 267 aa7.42□□□□□ -1.22
RNF4-220ENST00000513578 OCM2P0CE71 109 aa7.42□□□□□ -1.22
RNF4-220ENST00000513578 OCMP0CE72 109 aaPredicted RBP7.42□□□□□ -1.22
RNF4-220ENST00000513578 CALCBP10092 127 aa7.42□□□□□ -1.22
RNF4-220ENST00000513578 CD46P15529 392 aa7.42□□□□□ -1.22
RNF4-220ENST00000513578 ZNF708P17019 499 aa7.42□□□□□ -1.22
RNF4-220ENST00000513578 FSTP19883 344 aa7.42□□□□□ -1.22
RNF4-220ENST00000513578 KLK2P20151 261 aa7.42□□□□□ -1.22
RNF4-220ENST00000513578 POU3F2P20265 443 aaPredicted RBP7.42□□□□□ -1.22
RNF4-220ENST00000513578 ACHEP22303 614 aa7.42□□□□□ -1.22
RNF4-220ENST00000513578 RPS27P42677 84 aaKnown RBP7.42□□□□□ -1.22
RNF4-220ENST00000513578 CLDN15P56746 228 aa7.42□□□□□ -1.22
RNF4-220ENST00000513578 CLDN20P56880 219 aa7.42□□□□□ -1.22
RNF4-220ENST00000513578 DEFA1P59665 94 aa7.42□□□□□ -1.22
RNF4-220ENST00000513578 DEFA3P59666 94 aa7.42□□□□□ -1.22
RNF4-220ENST00000513578 CAMK2BQ13554 666 aa7.42□□□□□ -1.22
RNF4-220ENST00000513578 TOMM20Q15388 145 aa7.42□□□□□ -1.22
RNF4-220ENST00000513578 TRIM16LQ309B1 348 aa7.42□□□□□ -1.22
RNF4-220ENST00000513578 IDNKQ5T6J7 187 aa7.42□□□□□ -1.22
RNF4-220ENST00000513578 TMEM244Q5VVB8 128 aa7.42□□□□□ -1.22
RNF4-220ENST00000513578 CNIH2Q6PI25 160 aa7.42□□□□□ -1.22
RNF4-220ENST00000513578 FAM131AQ6UXB0 335 aa7.42□□□□□ -1.22
RNF4-220ENST00000513578 BAIAP2L2Q6UXY1 529 aa7.42□□□□□ -1.22
RNF4-220ENST00000513578 STAC2Q6ZMT1 411 aa7.42□□□□□ -1.22
RNF4-220ENST00000513578 LRRTM1Q86UE6 522 aa7.42□□□□□ -1.22
RNF4-220ENST00000513578 ZNF676Q8N7Q3 588 aa7.42□□□□□ -1.22
RNF4-220ENST00000513578 SLAMF6Q96DU3 332 aa7.42□□□□□ -1.22
RNF4-220ENST00000513578 UCN2Q96RP3 112 aa7.42□□□□□ -1.22
RNF4-220ENST00000513578 TTTY12Q9BZ98 90 aa7.42□□□□□ -1.22
RNF4-220ENST00000513578 ZNF552Q9H707 407 aaPredicted RBP7.42□□□□□ -1.22
RNF4-220ENST00000513578 G6PC2Q9NQR9 355 aa7.42□□□□□ -1.22
RNF4-220ENST00000513578 POLE4Q9NR33 117 aa7.42□□□□□ -1.22
RNF4-220ENST00000513578 ABCB10Q9NRK6 738 aa7.42□□□□□ -1.22
RNF4-220ENST00000513578 COMMD3Q9UBI1 195 aa7.42□□□□□ -1.22
RNF4-220ENST00000513578 ING1Q9UK53 422 aaPredicted RBP7.42□□□□□ -1.22
RNF4-220ENST00000513578 SPATA2Q9UM82 520 aa7.42□□□□□ -1.22
RNF4-220ENST00000513578 FOXJ3Q9UPW0 622 aa7.42□□□□□ -1.22
RNF4-220ENST00000513578 FLVCR1Q9Y5Y0 555 aa7.42□□□□□ -1.22
RNF4-220ENST00000513578 LHFPL6Q9Y693 200 aa7.42□□□□□ -1.22
RNF4-220ENST00000513578 V9GY05 133 aa7.42□□□□□ -1.22
RNF4-220ENST00000513578 A0A1W2PPL8 197 aa7.41□□□□□ -1.22
RNF4-220ENST00000513578 ARGFXA6NJG6 315 aa7.41□□□□□ -1.22
RNF4-220ENST00000513578 ZNF878C9JN71 531 aa7.41□□□□□ -1.22
RNF4-220ENST00000513578 AIPO00170 330 aa7.41□□□□□ -1.22
RNF4-220ENST00000513578 CXCL13O43927 109 aa7.41□□□□□ -1.22
RNF4-220ENST00000513578 HPGDSO60760 199 aa7.41□□□□□ -1.22
RNF4-220ENST00000513578 SLC43A1O75387 559 aa7.41□□□□□ -1.22
RNF4-220ENST00000513578 CEACAM4O75871 244 aa7.41□□□□□ -1.22
RNF4-220ENST00000513578 H2BFMP0C1H6 154 aa7.41□□□□□ -1.22
RNF4-220ENST00000513578 UBCP0CG48 685 aaKnown RBP7.41□□□□□ -1.22
RNF4-220ENST00000513578 IL7P13232 177 aa7.41□□□□□ -1.22
RNF4-220ENST00000513578 ATF1P18846 271 aa7.41□□□□□ -1.22
RNF4-220ENST00000513578 ELK1P19419 428 aa7.41□□□□□ -1.22
RNF4-220ENST00000513578 MSR1P21757 451 aa7.41□□□□□ -1.22
RNF4-220ENST00000513578 NR4A2P43354 598 aa7.41□□□□□ -1.22
RNF4-220ENST00000513578 LHX2P50458 406 aa7.41□□□□□ -1.22
RNF4-220ENST00000513578 NOVA1P51513 510 aaKnown RBP7.41□□□□□ -1.22
RNF4-220ENST00000513578 ZNF84P51523 738 aa7.41□□□□□ -1.22
RNF4-220ENST00000513578 CLDN18P56856 261 aa7.41□□□□□ -1.22
RNF4-220ENST00000513578 OR10A3P58181 314 aa7.41□□□□□ -1.22
RNF4-220ENST00000513578 MRPS34P82930 218 aaKnown RBP7.41□□□□□ -1.22
RNF4-220ENST00000513578 SCN1BQ07699 218 aa7.41□□□□□ -1.22
RNF4-220ENST00000513578 TGIF1Q15583 401 aa7.41□□□□□ -1.22
RNF4-220ENST00000513578 SLC25A35Q3KQZ1 300 aa7.41□□□□□ -1.22
RNF4-220ENST00000513578 NRN1LQ496H8 165 aa7.41□□□□□ -1.22
RNF4-220ENST00000513578 RIPPLY2Q5TAB7 128 aa7.41□□□□□ -1.22
RNF4-220ENST00000513578 HACD4Q5VWC8 232 aa7.41□□□□□ -1.22
RNF4-220ENST00000513578 OR7E24Q6IFN5 339 aa7.41□□□□□ -1.22
RNF4-220ENST00000513578 LINC00696Q6ZRV3 163 aa7.41□□□□□ -1.22
RNF4-220ENST00000513578 SLC22A16Q86VW1 577 aa7.41□□□□□ -1.22
RNF4-220ENST00000513578 HIST2H2ABQ8IUE6 130 aaPredicted RBP7.41□□□□□ -1.22
RNF4-220ENST00000513578 FAM109AQ8N4B1 249 aa7.41□□□□□ -1.22
RNF4-220ENST00000513578 TMEM251Q8N6I4 163 aa7.41□□□□□ -1.22
RNF4-220ENST00000513578 TMEM178AQ8NBL3 297 aa7.41□□□□□ -1.22
RNF4-220ENST00000513578 OR10S1Q8NGN2 331 aa7.41□□□□□ -1.22
RNF4-220ENST00000513578 OR6N1Q8NGY5 312 aa7.41□□□□□ -1.22
RNF4-220ENST00000513578 OR2AJ1Q8NGZ0 328 aa7.41□□□□□ -1.22
RNF4-220ENST00000513578 OR10D3Q8NH80 312 aa7.41□□□□□ -1.22
RNF4-220ENST00000513578 CPT1CQ8TCG5 803 aa7.41□□□□□ -1.22
RNF4-220ENST00000513578 RELTQ969Z4 430 aa7.41□□□□□ -1.22
RNF4-220ENST00000513578 NABP1Q96AH0 204 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms