RNA–Protein interactions for RNA: ENST00000513016.5

VCAN-209, Transcript of versican, humanhuman

TSL 1 (best)

Gene VCAN, Length 8,483 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-209ENST00000513016 TACR1P25103 407 aa3.86□□□□□ -1.79
VCAN-209ENST00000513016 TNFAIP6P98066 277 aaPredicted RBP3.86□□□□□ -1.79
VCAN-209ENST00000513016 ACKR1Q16570 336 aa3.86□□□□□ -1.79
VCAN-209ENST00000513016 UBE2NLQ5JXB2 153 aa3.86□□□□□ -1.79
VCAN-209ENST00000513016 TIGD3Q6B0B8 471 aa3.86□□□□□ -1.79
VCAN-209ENST00000513016 ZNF574Q6ZN55 896 aaPredicted RBP3.86□□□□□ -1.79
VCAN-209ENST00000513016 Q6ZRG5 221 aa3.86□□□□□ -1.79
VCAN-209ENST00000513016 MOB3BQ86TA1 216 aa3.86□□□□□ -1.79
VCAN-209ENST00000513016 COMTD1Q86VU5 262 aa3.86□□□□□ -1.79
VCAN-209ENST00000513016 GCNT2Q8N0V5 402 aa3.86□□□□□ -1.79
VCAN-209ENST00000513016 GTPBP8Q8N3Z3 284 aaPredicted RBP3.86□□□□□ -1.79
VCAN-209ENST00000513016 NUBPLQ8TB37 319 aa3.86□□□□□ -1.79
VCAN-209ENST00000513016 TMEM230Q96A57 120 aa3.86□□□□□ -1.79
VCAN-209ENST00000513016 DIRC2Q96SL1 478 aa3.86□□□□□ -1.79
VCAN-209ENST00000513016 PIGMQ9H3S5 423 aa3.86□□□□□ -1.79
VCAN-209ENST00000513016 HEXA-AS1Q9H8Q6 139 aa3.86□□□□□ -1.79
VCAN-209ENST00000513016 DLL4Q9NR61 685 aa3.86□□□□□ -1.79
VCAN-209ENST00000513016 GPR173Q9NS66 373 aa3.86□□□□□ -1.79
VCAN-209ENST00000513016 OCIAD1Q9NX40 245 aa3.86□□□□□ -1.79
VCAN-209ENST00000513016 KCNE1BA0A087WTH5 132 aa3.86□□□□□ -1.79
VCAN-209ENST00000513016 ZNF816-ZNF321PA0A0X1KG74 233 aa3.86□□□□□ -1.79
VCAN-209ENST00000513016 TCRBV5S1A1TA0A578 114 aa3.86□□□□□ -1.79
VCAN-209ENST00000513016 HMX3A6NHT5 357 aa3.86□□□□□ -1.79
VCAN-209ENST00000513016 C16orf97H3BN30 126 aa3.86□□□□□ -1.79
VCAN-209ENST00000513016 LCMT2O60294 686 aaKnown RBP3.86□□□□□ -1.79
VCAN-209ENST00000513016 SORBS2O94875 1100 aaKnown RBP3.86□□□□□ -1.79
VCAN-209ENST00000513016 HBE1P02100 147 aa3.86□□□□□ -1.79
VCAN-209ENST00000513016 RAF1P04049 648 aa3.86□□□□□ -1.79
VCAN-209ENST00000513016 GPX2P18283 190 aa3.86□□□□□ -1.79
VCAN-209ENST00000513016 TRIM23P36406 574 aa3.86□□□□□ -1.79
VCAN-209ENST00000513016 GNB1P62873 340 aa3.86□□□□□ -1.79
VCAN-209ENST00000513016 IL13RA1P78552 427 aa3.86□□□□□ -1.79
VCAN-209ENST00000513016 C6orf89Q6UWU4 347 aa3.86□□□□□ -1.79
VCAN-209ENST00000513016 ASCL5Q7RTU5 278 aa3.86□□□□□ -1.79
VCAN-209ENST00000513016 CDC20BQ86Y33 519 aa3.86□□□□□ -1.79
VCAN-209ENST00000513016 PTRH1Q86Y79 214 aaKnown RBP3.86□□□□□ -1.79
VCAN-209ENST00000513016 LGI3Q8N145 548 aa3.86□□□□□ -1.79
VCAN-209ENST00000513016 PRSS35Q8N3Z0 413 aa3.86□□□□□ -1.79
VCAN-209ENST00000513016 BHLHE23Q8NDY6 225 aa3.86□□□□□ -1.79
VCAN-209ENST00000513016 RPEQ96AT9 228 aa3.86□□□□□ -1.79
VCAN-209ENST00000513016 EMC6Q9BV81 110 aa3.86□□□□□ -1.79
VCAN-209ENST00000513016 COMMD5Q9GZQ3 224 aa3.86□□□□□ -1.79
VCAN-209ENST00000513016 GAL3ST2Q9H3Q3 398 aa3.86□□□□□ -1.79
VCAN-209ENST00000513016 FOXD3Q9UJU5 478 aaPredicted RBP3.86□□□□□ -1.79
VCAN-209ENST00000513016 DLG5Q8TDM6 1919 aa3.86□□□□□ -1.79
VCAN-209ENST00000513016 TRAV38-1A0A0B4J264 116 aa3.86□□□□□ -1.79
VCAN-209ENST00000513016 HSPB6O14558 160 aa3.86□□□□□ -1.79
VCAN-209ENST00000513016 TPPPO94811 219 aa3.86□□□□□ -1.79
VCAN-209ENST00000513016 TSPAN15O95858 294 aa3.86□□□□□ -1.79
VCAN-209ENST00000513016 GUSBP08236 651 aa3.86□□□□□ -1.79
VCAN-209ENST00000513016 SLC2A1P11166 492 aa3.86□□□□□ -1.79
VCAN-209ENST00000513016 RELAQ04206 551 aa3.86□□□□□ -1.79
VCAN-209ENST00000513016 RSPO4Q2I0M5 234 aaPredicted RBP3.86□□□□□ -1.79
VCAN-209ENST00000513016 CCDC58Q4VC31 144 aa3.86□□□□□ -1.79
VCAN-209ENST00000513016 FAM199XQ6PEV8 388 aaPredicted RBP3.86□□□□□ -1.79
VCAN-209ENST00000513016 NOXO1Q8NFA2 376 aa3.86□□□□□ -1.79
VCAN-209ENST00000513016 OR7G2Q8NG99 324 aa3.86□□□□□ -1.79
VCAN-209ENST00000513016 ST8SIA4Q92187 359 aa3.86□□□□□ -1.79
VCAN-209ENST00000513016 REEP6Q96HR9 211 aa3.86□□□□□ -1.79
VCAN-209ENST00000513016 BTF3L4Q96K17 158 aa3.86□□□□□ -1.79
VCAN-209ENST00000513016 IGHV5-51A0A0C4DH38 117 aa3.85□□□□□ -1.79
VCAN-209ENST00000513016 WDR1O75083 606 aa3.85□□□□□ -1.79
VCAN-209ENST00000513016 CLDN1O95832 211 aa3.85□□□□□ -1.79
VCAN-209ENST00000513016 GNG3P63215 75 aa3.85□□□□□ -1.79
VCAN-209ENST00000513016 TNK1Q13470 666 aa3.85□□□□□ -1.79
VCAN-209ENST00000513016 SELPLGQ14242 412 aa3.85□□□□□ -1.79
VCAN-209ENST00000513016 TOMM34Q15785 309 aaPredicted RBP3.85□□□□□ -1.79
VCAN-209ENST00000513016 XKR7Q5GH72 579 aa3.85□□□□□ -1.79
VCAN-209ENST00000513016 RNF220Q5VTB9 566 aa3.85□□□□□ -1.79
VCAN-209ENST00000513016 OR51A4Q8NGJ6 313 aa3.85□□□□□ -1.79
VCAN-209ENST00000513016 OR2I1PQ8NGU4 316 aa3.85□□□□□ -1.79
VCAN-209ENST00000513016 MED30Q96HR3 178 aa3.85□□□□□ -1.79
VCAN-209ENST00000513016 OPALINQ96PE5 141 aa3.85□□□□□ -1.79
VCAN-209ENST00000513016 CITED4Q96RK1 184 aa3.85□□□□□ -1.79
VCAN-209ENST00000513016 SARGQ9BW04 601 aa3.85□□□□□ -1.79
VCAN-209ENST00000513016 ZCCHC4Q9H5U6 513 aa3.85□□□□□ -1.79
VCAN-209ENST00000513016 C19orf12Q9NSK7 152 aa3.85□□□□□ -1.79
VCAN-209ENST00000513016 MRPL15Q9P015 296 aaKnown RBP3.85□□□□□ -1.79
VCAN-209ENST00000513016 MAST2Q6P0Q8 1798 aa3.85□□□□□ -1.79
VCAN-209ENST00000513016 GOSR2O14653 212 aa3.85□□□□□ -1.79
VCAN-209ENST00000513016 EFSO43281 561 aa3.85□□□□□ -1.79
VCAN-209ENST00000513016 B3GALT4O96024 378 aa3.85□□□□□ -1.79
VCAN-209ENST00000513016 MAKP20794 623 aa3.85□□□□□ -1.79
VCAN-209ENST00000513016 GALNSP34059 522 aa3.85□□□□□ -1.79
VCAN-209ENST00000513016 SOX18P35713 384 aa3.85□□□□□ -1.79
VCAN-209ENST00000513016 ETV4P43268 484 aa3.85□□□□□ -1.79
VCAN-209ENST00000513016 FUT6P51993 359 aa3.85□□□□□ -1.79
VCAN-209ENST00000513016 EGR3Q06889 387 aa3.85□□□□□ -1.79
VCAN-209ENST00000513016 ZNF468Q5VIY5 522 aaPredicted RBP3.85□□□□□ -1.79
VCAN-209ENST00000513016 LRRC28Q86X40 367 aaPredicted RBP3.85□□□□□ -1.79
VCAN-209ENST00000513016 ADGRF3Q8IZF5 1079 aa3.85□□□□□ -1.79
VCAN-209ENST00000513016 OR52N1Q8NH53 320 aa3.85□□□□□ -1.79
VCAN-209ENST00000513016 OR51F2Q8NH61 342 aa3.85□□□□□ -1.79
VCAN-209ENST00000513016 TMEM255BQ8WV15 326 aa3.85□□□□□ -1.79
VCAN-209ENST00000513016 A0A0B4J203 849 aa3.85□□□□□ -1.79
VCAN-209ENST00000513016 hADV38S2A0JD32 116 aa3.85□□□□□ -1.79
VCAN-209ENST00000513016 IFNL4K9M1U5 179 aa3.85□□□□□ -1.79
VCAN-209ENST00000513016 GOSR1O95249 250 aa3.85□□□□□ -1.79
VCAN-209ENST00000513016 CEACAM1P13688 526 aa3.85□□□□□ -1.79
VCAN-209ENST00000513016 THBS4P35443 961 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms