RNA–Protein interactions for RNA: ENST00000512590.6

VCAN-208, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 5,923 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-208ENST00000512590 OR7D2Q96RA2 312 aa8.17□□□□□ -1.1
VCAN-208ENST00000512590 ARMC1Q9NVT9 282 aa8.17□□□□□ -1.1
VCAN-208ENST00000512590 RAB22AQ9UL26 194 aa8.17□□□□□ -1.1
VCAN-208ENST00000512590 MADDQ8WXG6 1647 aa8.17□□□□□ -1.1
VCAN-208ENST00000512590 NWD1Q149M9 1564 aa8.16□□□□□ -1.1
VCAN-208ENST00000512590 M0R3H8 397 aa8.16□□□□□ -1.1
VCAN-208ENST00000512590 SDCBPO00560 298 aaPredicted RBP8.16□□□□□ -1.1
VCAN-208ENST00000512590 CD82P27701 267 aa8.16□□□□□ -1.1
VCAN-208ENST00000512590 PSMB5P28074 263 aa8.16□□□□□ -1.1
VCAN-208ENST00000512590 TRA2BP62995 288 aaKnown RBP8.16□□□□□ -1.1
VCAN-208ENST00000512590 Q6ZN92 141 aa8.16□□□□□ -1.1
VCAN-208ENST00000512590 C2CD4AQ8NCU7 369 aaPredicted RBP8.16□□□□□ -1.1
VCAN-208ENST00000512590 OR51F2Q8NH61 342 aa8.16□□□□□ -1.1
VCAN-208ENST00000512590 MEGF10Q96KG7 1140 aa8.16□□□□□ -1.1
VCAN-208ENST00000512590 PAAF1Q9BRP4 392 aa8.16□□□□□ -1.1
VCAN-208ENST00000512590 SIX4Q9UIU6 781 aa8.16□□□□□ -1.1
VCAN-208ENST00000512590 GLI2P10070 1586 aa8.16□□□□□ -1.1
VCAN-208ENST00000512590 VWDEQ8N2E2 1590 aa8.16□□□□□ -1.1
VCAN-208ENST00000512590 IGKV3D-15A0A087WSY6 115 aa8.16□□□□□ -1.1
VCAN-208ENST00000512590 IGHV3-15A0A0B4J1V0 119 aa8.16□□□□□ -1.1
VCAN-208ENST00000512590 TRAV38-1A0A0B4J264 116 aa8.16□□□□□ -1.1
VCAN-208ENST00000512590 IGKV3-15P01624 115 aa8.16□□□□□ -1.1
VCAN-208ENST00000512590 ADRA1AP35348 466 aa8.16□□□□□ -1.1
VCAN-208ENST00000512590 HBA1P69905 142 aa8.16□□□□□ -1.1
VCAN-208ENST00000512590 TNXAQ16473 311 aa8.16□□□□□ -1.1
VCAN-208ENST00000512590 ZNF678Q5SXM1 525 aa8.16□□□□□ -1.1
VCAN-208ENST00000512590 UBE3DQ7Z6J8 389 aa8.16□□□□□ -1.1
VCAN-208ENST00000512590 CPOQ8IVL8 374 aa8.16□□□□□ -1.1
VCAN-208ENST00000512590 C3orf56Q8N813 242 aa8.16□□□□□ -1.1
VCAN-208ENST00000512590 OR4K5Q8NGD3 323 aa8.16□□□□□ -1.1
VCAN-208ENST00000512590 SPPL3Q8TCT6 385 aa8.16□□□□□ -1.1
VCAN-208ENST00000512590 BIRC7Q96CA5 298 aa8.16□□□□□ -1.1
VCAN-208ENST00000512590 SORBS1Q9BX66 1292 aaKnown RBP8.16□□□□□ -1.1
VCAN-208ENST00000512590 ACOT13Q9NPJ3 140 aa8.16□□□□□ -1.1
VCAN-208ENST00000512590 SS18L1O75177 396 aaPredicted RBP8.16□□□□□ -1.1
VCAN-208ENST00000512590 BMP2P12643 396 aa8.16□□□□□ -1.1
VCAN-208ENST00000512590 PDLIM4P50479 330 aa8.16□□□□□ -1.1
VCAN-208ENST00000512590 ACOT7LQ6ZUV0 252 aa8.16□□□□□ -1.1
VCAN-208ENST00000512590 LHFPL2Q6ZUX7 228 aa8.16□□□□□ -1.1
VCAN-208ENST00000512590 FA2HQ7L5A8 372 aa8.16□□□□□ -1.1
VCAN-208ENST00000512590 TIPARPQ7Z3E1 657 aaKnown RBP8.16□□□□□ -1.1
VCAN-208ENST00000512590 PNPLA5Q7Z6Z6 429 aaPredicted RBP8.16□□□□□ -1.1
VCAN-208ENST00000512590 SLC24A4Q8NFF2 622 aa8.16□□□□□ -1.1
VCAN-208ENST00000512590 RDH5Q92781 318 aa8.16□□□□□ -1.1
VCAN-208ENST00000512590 GALMQ96C23 342 aa8.16□□□□□ -1.1
VCAN-208ENST00000512590 ASB9Q96DX5 294 aa8.16□□□□□ -1.1
VCAN-208ENST00000512590 ABHD14AQ9BUJ0 271 aa8.16□□□□□ -1.1
VCAN-208ENST00000512590 MS4A5Q9H3V2 200 aa8.16□□□□□ -1.1
VCAN-208ENST00000512590 NMNAT1Q9HAN9 279 aaPredicted RBP8.16□□□□□ -1.1
VCAN-208ENST00000512590 BET1LQ9NYM9 111 aa8.16□□□□□ -1.1
VCAN-208ENST00000512590 CACFD1Q9UGQ2 172 aa8.16□□□□□ -1.1
VCAN-208ENST00000512590 HSPB11Q9Y547 144 aa8.16□□□□□ -1.1
VCAN-208ENST00000512590 MICAL3Q7RTP6 2002 aa8.16□□□□□ -1.1
VCAN-208ENST00000512590 hADV38S2A0JD32 116 aa8.16□□□□□ -1.1
VCAN-208ENST00000512590 KCNAB3O43448 404 aa8.16□□□□□ -1.1
VCAN-208ENST00000512590 HPP00738 406 aa8.16□□□□□ -1.1
VCAN-208ENST00000512590 CASP3P42574 277 aa8.16□□□□□ -1.1
VCAN-208ENST00000512590 NR4A2P43354 598 aa8.16□□□□□ -1.1
VCAN-208ENST00000512590 CNN1P51911 297 aaKnown RBP8.16□□□□□ -1.1
VCAN-208ENST00000512590 HERVK_113P61574 105 aa8.16□□□□□ -1.1
VCAN-208ENST00000512590 TFF2Q03403 129 aa8.16□□□□□ -1.1
VCAN-208ENST00000512590 PHLDA2Q53GA4 152 aa8.16□□□□□ -1.1
VCAN-208ENST00000512590 CPZQ66K79 652 aa8.16□□□□□ -1.1
VCAN-208ENST00000512590 BTNL8Q6UX41 500 aa8.16□□□□□ -1.1
VCAN-208ENST00000512590 RSPO2Q6UXX9 243 aaPredicted RBP8.16□□□□□ -1.1
VCAN-208ENST00000512590 ADAT1Q9BUB4 502 aaKnown RBP8.16□□□□□ -1.1
VCAN-208ENST00000512590 B3GALT5Q9Y2C3 310 aa8.16□□□□□ -1.1
VCAN-208ENST00000512590 PTGDR2Q9Y5Y4 395 aa8.16□□□□□ -1.1
VCAN-208ENST00000512590 A0A1W2PR80 420 aa8.16□□□□□ -1.1
VCAN-208ENST00000512590 THBS1P07996 1170 aa8.16□□□□□ -1.1
VCAN-208ENST00000512590 HMGCLP35914 325 aa8.16□□□□□ -1.1
VCAN-208ENST00000512590 RAB7AP51149 207 aa8.16□□□□□ -1.1
VCAN-208ENST00000512590 KCNJ10P78508 379 aa8.16□□□□□ -1.1
VCAN-208ENST00000512590 IAH1Q2TAA2 248 aaPredicted RBP8.16□□□□□ -1.1
VCAN-208ENST00000512590 STPG1Q5TH74 334 aa8.16□□□□□ -1.1
VCAN-208ENST00000512590 RNF220Q5VTB9 566 aa8.16□□□□□ -1.1
VCAN-208ENST00000512590 OR6M1Q8NGM8 313 aa8.16□□□□□ -1.1
VCAN-208ENST00000512590 UBALD1Q8TB05 177 aa8.16□□□□□ -1.1
VCAN-208ENST00000512590 ISG20Q96AZ6 181 aaKnown RBP8.16□□□□□ -1.1
VCAN-208ENST00000512590 SLC12A9Q9BXP2 914 aa8.16□□□□□ -1.1
VCAN-208ENST00000512590 HDAC8Q9BY41 377 aa8.16□□□□□ -1.1
VCAN-208ENST00000512590 HSD3B7Q9H2F3 369 aa8.16□□□□□ -1.1
VCAN-208ENST00000512590 AIG1Q9NVV5 245 aa8.16□□□□□ -1.1
VCAN-208ENST00000512590 TMEM59LQ9UK28 342 aa8.16□□□□□ -1.1
VCAN-208ENST00000512590 KLK4Q9Y5K2 254 aa8.16□□□□□ -1.1
VCAN-208ENST00000512590 IGKV3D-11A0A0A0MRZ8 115 aa8.15□□□□□ -1.1
VCAN-208ENST00000512590 J3QR89 54 aa8.15□□□□□ -1.1
VCAN-208ENST00000512590 J3QW42 95 aa8.15□□□□□ -1.1
VCAN-208ENST00000512590 MPDU1O75352 247 aa8.15□□□□□ -1.1
VCAN-208ENST00000512590 IGKV3-11P04433 115 aa8.15□□□□□ -1.1
VCAN-208ENST00000512590 ZFP36L2P47974 494 aaKnown RBP8.15□□□□□ -1.1
VCAN-208ENST00000512590 CCR5P51681 352 aa8.15□□□□□ -1.1
VCAN-208ENST00000512590 TM4SF19Q96DZ7 209 aa8.15□□□□□ -1.1
VCAN-208ENST00000512590 THAP10Q9P2Z0 257 aaPredicted RBP8.15□□□□□ -1.1
VCAN-208ENST00000512590 A0A1W2PN81 502 aa8.15□□□□□ -1.1
VCAN-208ENST00000512590 FRS3O43559 492 aa8.15□□□□□ -1.1
VCAN-208ENST00000512590 CHRNA7P36544 502 aa8.15□□□□□ -1.1
VCAN-208ENST00000512590 RBP2P50120 134 aa8.15□□□□□ -1.1
VCAN-208ENST00000512590 Q3ZCU0 254 aa8.15□□□□□ -1.1
VCAN-208ENST00000512590 CXorf66Q5JRM2 361 aaPredicted RBP8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms