RNA–Protein interactions for RNA: ENST00000511426.5

SCLT1-209, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-209ENST00000511426 PSMD9O00233 223 aa13.43□□□□□ -0.26
SCLT1-209ENST00000511426 RPP14O95059 124 aaKnown RBP13.43□□□□□ -0.26
SCLT1-209ENST00000511426 APOC1P02654 83 aa13.43□□□□□ -0.26
SCLT1-209ENST00000511426 CST2P09228 141 aa13.43□□□□□ -0.26
SCLT1-209ENST00000511426 CD8BP10966 210 aa13.43□□□□□ -0.26
SCLT1-209ENST00000511426 CTSSP25774 331 aa13.43□□□□□ -0.26
SCLT1-209ENST00000511426 S100A5P33763 92 aa13.43□□□□□ -0.26
SCLT1-209ENST00000511426 SDC2P34741 201 aa13.43□□□□□ -0.26
SCLT1-209ENST00000511426 PSMB10P40306 273 aa13.43□□□□□ -0.26
SCLT1-209ENST00000511426 NANOS3P60323 173 aaKnown RBP13.43□□□□□ -0.26
SCLT1-209ENST00000511426 RPS11P62280 158 aaKnown RBP eCLIP13.43□□□□□ -0.26
SCLT1-209ENST00000511426 HIST1H3AP68431 136 aa13.43□□□□□ -0.26
SCLT1-209ENST00000511426 Q499Y3 187 aa13.43□□□□□ -0.26
SCLT1-209ENST00000511426 HIST2H3PS2Q5TEC6 136 aa13.43□□□□□ -0.26
SCLT1-209ENST00000511426 OR7E24Q6IFN5 339 aa13.43□□□□□ -0.26
SCLT1-209ENST00000511426 ZNF704Q6ZNC4 412 aaPredicted RBP13.43□□□□□ -0.26
SCLT1-209ENST00000511426 HIST2H3AQ71DI3 136 aa13.43□□□□□ -0.26
SCLT1-209ENST00000511426 CEACAM19Q7Z692 300 aa13.43□□□□□ -0.26
SCLT1-209ENST00000511426 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.43□□□□□ -0.26
SCLT1-209ENST00000511426 GMPPAQ96IJ6 420 aaPredicted RBP13.43□□□□□ -0.26
SCLT1-209ENST00000511426 TMEM38BQ9NVV0 291 aa13.43□□□□□ -0.26
SCLT1-209ENST00000511426 ASH2LQ9UBL3 628 aa13.43□□□□□ -0.26
SCLT1-209ENST00000511426 TUBD1Q9UJT1 453 aa13.43□□□□□ -0.26
SCLT1-209ENST00000511426 PMF1-BGLAPU3KQ54 211 aa13.43□□□□□ -0.26
SCLT1-209ENST00000511426 TRBV5-5A0A0J9YX44 114 aa13.42□□□□□ -0.26
SCLT1-209ENST00000511426 AHRRA9YTQ3 701 aa13.42□□□□□ -0.26
SCLT1-209ENST00000511426 LOC110117498-PIK3R3F6TDL0 507 aa13.42□□□□□ -0.26
SCLT1-209ENST00000511426 SRSF10O75494 262 aaKnown RBP13.42□□□□□ -0.26
SCLT1-209ENST00000511426 ISG15P05161 165 aa13.42□□□□□ -0.26
SCLT1-209ENST00000511426 INHBBP09529 407 aa13.42□□□□□ -0.26
SCLT1-209ENST00000511426 UBCP0CG48 685 aaKnown RBP13.42□□□□□ -0.26
SCLT1-209ENST00000511426 PCBD1P61457 104 aa13.42□□□□□ -0.26
SCLT1-209ENST00000511426 PHYHD1Q5SRE7 291 aa13.42□□□□□ -0.26
SCLT1-209ENST00000511426 ZNF627Q7L945 461 aa13.42□□□□□ -0.26
SCLT1-209ENST00000511426 LINC00346Q8IVM7 164 aa13.42□□□□□ -0.26
SCLT1-209ENST00000511426 ZNF676Q8N7Q3 588 aa13.42□□□□□ -0.26
SCLT1-209ENST00000511426 RBMXL3Q8N7X1 1067 aaKnown RBP13.42□□□□□ -0.26
SCLT1-209ENST00000511426 ACOT12Q8WYK0 555 aa13.42□□□□□ -0.26
SCLT1-209ENST00000511426 KCTD12Q96CX2 325 aaKnown RBP13.42□□□□□ -0.26
SCLT1-209ENST00000511426 FOXB1Q99853 325 aa13.42□□□□□ -0.26
SCLT1-209ENST00000511426 PDCD1LG2Q9BQ51 273 aa13.42□□□□□ -0.26
SCLT1-209ENST00000511426 CRLF2Q9HC73 371 aa13.42□□□□□ -0.26
SCLT1-209ENST00000511426 PALMDQ9NP74 551 aa13.42□□□□□ -0.26
SCLT1-209ENST00000511426 SNTG1Q9NSN8 517 aa13.42□□□□□ -0.26
SCLT1-209ENST00000511426 CLCF1Q9UBD9 225 aa13.42□□□□□ -0.26
SCLT1-209ENST00000511426 CLDN25C9JDP6 229 aa13.41□□□□□ -0.26
SCLT1-209ENST00000511426 TAF4O00268 1085 aa13.41□□□□□ -0.26
SCLT1-209ENST00000511426 CALRP27797 417 aaKnown RBP13.41□□□□□ -0.26
SCLT1-209ENST00000511426 CDAP32320 146 aa13.41□□□□□ -0.26
SCLT1-209ENST00000511426 PTGER4P35408 488 aa13.41□□□□□ -0.26
SCLT1-209ENST00000511426 PSMA6P60900 246 aaKnown RBP13.41□□□□□ -0.26
SCLT1-209ENST00000511426 SCRN3Q0VDG4 424 aa13.41□□□□□ -0.26
SCLT1-209ENST00000511426 ENDOGQ14249 297 aaKnown RBP13.41□□□□□ -0.26
SCLT1-209ENST00000511426 SGCAQ16586 387 aa13.41□□□□□ -0.26
SCLT1-209ENST00000511426 KRTCAP3Q53RY4 240 aa13.41□□□□□ -0.26
SCLT1-209ENST00000511426 WDR38Q5JTN6 314 aa13.41□□□□□ -0.26
SCLT1-209ENST00000511426 CATSPERDQ86XM0 798 aa13.41□□□□□ -0.26
SCLT1-209ENST00000511426 APH1AQ96BI3 265 aa13.41□□□□□ -0.26
SCLT1-209ENST00000511426 DCLRE1CQ96SD1 692 aaKnown RBP13.41□□□□□ -0.26
SCLT1-209ENST00000511426 ZNF416Q9BWM5 594 aa13.41□□□□□ -0.26
SCLT1-209ENST00000511426 EMC7Q9NPA0 242 aa13.41□□□□□ -0.26
SCLT1-209ENST00000511426 ZNF587BE7ETH6 402 aa13.4□□□□□ -0.26
SCLT1-209ENST00000511426 SS18L1O75177 396 aaPredicted RBP13.4□□□□□ -0.26
SCLT1-209ENST00000511426 KRT33AO76009 404 aa13.4□□□□□ -0.26
SCLT1-209ENST00000511426 FARS2O95363 451 aaKnown RBP13.4□□□□□ -0.26
SCLT1-209ENST00000511426 FREM3P0C091 2139 aa13.4□□□□□ -0.26
SCLT1-209ENST00000511426 NTF4P34130 210 aa13.4□□□□□ -0.26
SCLT1-209ENST00000511426 ID4P47928 161 aa13.4□□□□□ -0.26
SCLT1-209ENST00000511426 ECH1Q13011 328 aa13.4□□□□□ -0.26
SCLT1-209ENST00000511426 ZNF846Q147U1 533 aa13.4□□□□□ -0.26
SCLT1-209ENST00000511426 TBR1Q16650 682 aa13.4□□□□□ -0.26
SCLT1-209ENST00000511426 HSD17B12Q53GQ0 312 aa13.4□□□□□ -0.26
SCLT1-209ENST00000511426 TMEM244Q5VVB8 128 aa13.4□□□□□ -0.26
SCLT1-209ENST00000511426 OR2A2Q6IF42 318 aa13.4□□□□□ -0.26
SCLT1-209ENST00000511426 FGD2Q7Z6J4 655 aa13.4□□□□□ -0.26
SCLT1-209ENST00000511426 DPPA2Q7Z7J5 298 aa13.4□□□□□ -0.26
SCLT1-209ENST00000511426 TUSC5Q8IXB3 177 aa13.4□□□□□ -0.26
SCLT1-209ENST00000511426 IL17RDQ8NFM7 739 aa13.4□□□□□ -0.26
SCLT1-209ENST00000511426 HSD17B8Q92506 261 aa13.4□□□□□ -0.26
SCLT1-209ENST00000511426 TAAR6Q96RI8 345 aa13.4□□□□□ -0.26
SCLT1-209ENST00000511426 HDHD2Q9H0R4 259 aa13.4□□□□□ -0.26
SCLT1-209ENST00000511426 SLITRK2Q9H156 845 aa13.4□□□□□ -0.26
SCLT1-209ENST00000511426 GPR35Q9HC97 309 aa13.4□□□□□ -0.26
SCLT1-209ENST00000511426 CENPMQ9NSP4 180 aa13.4□□□□□ -0.26
SCLT1-209ENST00000511426 ATPIF1Q9UII2 106 aa13.4□□□□□ -0.26
SCLT1-209ENST00000511426 A0A087WV48 116 aa13.4□□□□□ -0.26
SCLT1-209ENST00000511426 TMEM269A0A1B0GVZ9 245 aa13.4□□□□□ -0.26
SCLT1-209ENST00000511426 PDCD5O14737 125 aa13.4□□□□□ -0.26
SCLT1-209ENST00000511426 LRRTM2O43300 516 aa13.4□□□□□ -0.26
SCLT1-209ENST00000511426 CNOT4O95628 575 aaKnown RBP13.4□□□□□ -0.26
SCLT1-209ENST00000511426 ACHEP22303 614 aa13.4□□□□□ -0.26
SCLT1-209ENST00000511426 HSD11B1P28845 292 aa13.4□□□□□ -0.26
SCLT1-209ENST00000511426 ETV6P41212 452 aa13.4□□□□□ -0.26
SCLT1-209ENST00000511426 HNRNPA0Q13151 305 aaKnown RBP13.4□□□□□ -0.26
SCLT1-209ENST00000511426 DCTN2Q13561 401 aaKnown RBP13.4□□□□□ -0.26
SCLT1-209ENST00000511426 EIF2S3LQ2VIR3 472 aaKnown RBP13.4□□□□□ -0.26
SCLT1-209ENST00000511426 CORO6Q6QEF8 472 aa13.4□□□□□ -0.26
SCLT1-209ENST00000511426 CFAP77Q6ZQR2 320 aa13.4□□□□□ -0.26
SCLT1-209ENST00000511426 P4HA3Q7Z4N8 544 aa13.4□□□□□ -0.26
SCLT1-209ENST00000511426 PRSS35Q8N3Z0 413 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 143.4 ms