RNA–Protein interactions for RNA: ENST00000509006.1

DEPDC1B-204, Transcript of DEP domain containing 1B, humanhuman

TSL 4

Gene DEPDC1B, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-204ENST00000509006 EFCAB7A8K855 629 aa1.88□□□□□ -2.11
DEPDC1B-204ENST00000509006 ZNF487B1APH4 448 aa1.88□□□□□ -2.11
DEPDC1B-204ENST00000509006 PRAMEF26H0Y7S4 382 aa1.88□□□□□ -2.11
DEPDC1B-204ENST00000509006 CLDN34H7C241 214 aa1.88□□□□□ -2.11
DEPDC1B-204ENST00000509006 GFYI3L273 518 aa1.88□□□□□ -2.11
DEPDC1B-204ENST00000509006 hCG_2039718K7EN88 272 aa1.88□□□□□ -2.11
DEPDC1B-204ENST00000509006 M0R036 132 aa1.88□□□□□ -2.11
DEPDC1B-204ENST00000509006 DFFAO00273 331 aa1.88□□□□□ -2.11
DEPDC1B-204ENST00000509006 SULT1C2O00338 296 aa1.88□□□□□ -2.11
DEPDC1B-204ENST00000509006 SLC17A2O00624 439 aa1.88□□□□□ -2.11
DEPDC1B-204ENST00000509006 RAD51CO43502 376 aa1.88□□□□□ -2.11
DEPDC1B-204ENST00000509006 TBL1XO60907 577 aa1.88□□□□□ -2.11
DEPDC1B-204ENST00000509006 GPX5O75715 221 aa1.88□□□□□ -2.11
DEPDC1B-204ENST00000509006 GJB5O95377 273 aa1.88□□□□□ -2.11
DEPDC1B-204ENST00000509006 TNFAIP8O95379 198 aa1.88□□□□□ -2.11
DEPDC1B-204ENST00000509006 DEXIO95424 95 aa1.88□□□□□ -2.11
DEPDC1B-204ENST00000509006 SNAP29O95721 258 aa1.88□□□□□ -2.11
DEPDC1B-204ENST00000509006 GCGP01275 180 aa1.88□□□□□ -2.11
DEPDC1B-204ENST00000509006 HPNP05981 417 aa1.88□□□□□ -2.11
DEPDC1B-204ENST00000509006 HCKP08631 526 aa1.88□□□□□ -2.11
DEPDC1B-204ENST00000509006 HOXD4P09016 255 aaPredicted RBP1.88□□□□□ -2.11
DEPDC1B-204ENST00000509006 OR8U9P0C7N5 309 aa1.88□□□□□ -2.11
DEPDC1B-204ENST00000509006 ZNF853P0CG23 659 aa1.88□□□□□ -2.11
DEPDC1B-204ENST00000509006 WARSP23381 471 aaKnown RBP1.88□□□□□ -2.11
DEPDC1B-204ENST00000509006 MYL9P24844 172 aa1.88□□□□□ -2.11
DEPDC1B-204ENST00000509006 OR1E1P30953 314 aa1.88□□□□□ -2.11
DEPDC1B-204ENST00000509006 HOXA6P31267 233 aa1.88□□□□□ -2.11
DEPDC1B-204ENST00000509006 RPA3P35244 121 aaPredicted RBP1.88□□□□□ -2.11
DEPDC1B-204ENST00000509006 MAS1LP35410 378 aa1.88□□□□□ -2.11
DEPDC1B-204ENST00000509006 OR1D4P47884 311 aa1.88□□□□□ -2.11
DEPDC1B-204ENST00000509006 CDC34P49427 236 aaPredicted RBP1.88□□□□□ -2.11
DEPDC1B-204ENST00000509006 CCR8P51685 355 aa1.88□□□□□ -2.11
DEPDC1B-204ENST00000509006 XKP51811 444 aa1.88□□□□□ -2.11
DEPDC1B-204ENST00000509006 SUB1P53999 127 aaKnown RBP eCLIP1.88□□□□□ -2.11
DEPDC1B-204ENST00000509006 ATP5J2P56134 94 aa1.88□□□□□ -2.11
DEPDC1B-204ENST00000509006 OR2B6P58173 313 aa1.88□□□□□ -2.11
DEPDC1B-204ENST00000509006 VSX2P58304 361 aaPredicted RBP1.88□□□□□ -2.11
DEPDC1B-204ENST00000509006 UBE2MP61081 183 aaKnown RBP1.88□□□□□ -2.11
DEPDC1B-204ENST00000509006 UBE2KP61086 200 aa1.88□□□□□ -2.11
DEPDC1B-204ENST00000509006 ATP6V0D1P61421 351 aa1.88□□□□□ -2.11
DEPDC1B-204ENST00000509006 ACTA2P62736 377 aa1.88□□□□□ -2.11
DEPDC1B-204ENST00000509006 ACTG2P63267 376 aa1.88□□□□□ -2.11
DEPDC1B-204ENST00000509006 ACTC1P68032 377 aa1.88□□□□□ -2.11
DEPDC1B-204ENST00000509006 ACTA1P68133 377 aa1.88□□□□□ -2.11
DEPDC1B-204ENST00000509006 DR1Q01658 176 aa1.88□□□□□ -2.11
DEPDC1B-204ENST00000509006 SLAMF1Q13291 335 aa1.88□□□□□ -2.11
DEPDC1B-204ENST00000509006 DPYSL3Q14195 570 aa1.88□□□□□ -2.11
DEPDC1B-204ENST00000509006 SLC10A1Q14973 349 aa1.88□□□□□ -2.11
DEPDC1B-204ENST00000509006 ZNF146Q15072 292 aa1.88□□□□□ -2.11
DEPDC1B-204ENST00000509006 PON2Q15165 354 aa1.88□□□□□ -2.11
DEPDC1B-204ENST00000509006 NECTIN1Q15223 517 aa1.88□□□□□ -2.11
DEPDC1B-204ENST00000509006 TNXAQ16473 311 aa1.88□□□□□ -2.11
DEPDC1B-204ENST00000509006 GOLGA7BQ2TAP0 167 aa1.88□□□□□ -2.11
DEPDC1B-204ENST00000509006 TMEM249Q2WGJ8 235 aa1.88□□□□□ -2.11
DEPDC1B-204ENST00000509006 BSXQ3C1V8 233 aa1.88□□□□□ -2.11
DEPDC1B-204ENST00000509006 SLC36A2Q495M3 483 aa1.88□□□□□ -2.11
DEPDC1B-204ENST00000509006 ZBED5Q49AG3 693 aa1.88□□□□□ -2.11
DEPDC1B-204ENST00000509006 FAM120AOSQ5T036 256 aa1.88□□□□□ -2.11
DEPDC1B-204ENST00000509006 CCNJQ5T5M9 372 aa1.88□□□□□ -2.11
DEPDC1B-204ENST00000509006 CPTPQ5TA50 214 aa1.88□□□□□ -2.11
DEPDC1B-204ENST00000509006 ZNF658Q5TYW1 1059 aaPredicted RBP1.88□□□□□ -2.11
DEPDC1B-204ENST00000509006 MFSD14CQ5VZR4 134 aa1.88□□□□□ -2.11
DEPDC1B-204ENST00000509006 RESP18Q5W5W9 173 aa1.88□□□□□ -2.11
DEPDC1B-204ENST00000509006 LPCAT4Q643R3 524 aa1.88□□□□□ -2.11
DEPDC1B-204ENST00000509006 FRMPD2BQ6IN97 320 aa1.88□□□□□ -2.11
DEPDC1B-204ENST00000509006 FAM45BPQ6NSW5 357 aa1.88□□□□□ -2.11
DEPDC1B-204ENST00000509006 MBOAT1Q6ZNC8 495 aa1.88□□□□□ -2.11
DEPDC1B-204ENST00000509006 TMEM179Q6ZVK1 233 aa1.88□□□□□ -2.11
DEPDC1B-204ENST00000509006 HORMAD1Q86X24 394 aa1.88□□□□□ -2.11
DEPDC1B-204ENST00000509006 CA13Q8N1Q1 262 aa1.88□□□□□ -2.11
DEPDC1B-204ENST00000509006 PRELID2Q8N945 189 aa1.88□□□□□ -2.11
DEPDC1B-204ENST00000509006 CYB561A3Q8NBI2 242 aa1.88□□□□□ -2.11
DEPDC1B-204ENST00000509006 CATSPER1Q8NEC5 780 aa1.88□□□□□ -2.11
DEPDC1B-204ENST00000509006 VN1R2Q8NFZ6 395 aa1.88□□□□□ -2.11
DEPDC1B-204ENST00000509006 OR2AP1Q8NGE2 309 aa1.88□□□□□ -2.11
DEPDC1B-204ENST00000509006 OR6Q1Q8NGQ2 317 aa1.88□□□□□ -2.11
DEPDC1B-204ENST00000509006 OR8U1Q8NH10 309 aa1.88□□□□□ -2.11
DEPDC1B-204ENST00000509006 OR51F2Q8NH61 342 aa1.88□□□□□ -2.11
DEPDC1B-204ENST00000509006 OR51A7Q8NH64 312 aa1.88□□□□□ -2.11
DEPDC1B-204ENST00000509006 OR56B4Q8NH76 319 aa1.88□□□□□ -2.11
DEPDC1B-204ENST00000509006 CCDC26Q8TAB7 109 aa1.88□□□□□ -2.11
DEPDC1B-204ENST00000509006 ZNF519Q8TB69 540 aa1.88□□□□□ -2.11
DEPDC1B-204ENST00000509006 FAM45AQ8TCE6 357 aa1.88□□□□□ -2.11
DEPDC1B-204ENST00000509006 MCOLN3Q8TDD5 553 aa1.88□□□□□ -2.11
DEPDC1B-204ENST00000509006 VN1R17PQ8TDU5 208 aa1.88□□□□□ -2.11
DEPDC1B-204ENST00000509006 OR8D1Q8WZ84 308 aa1.88□□□□□ -2.11
DEPDC1B-204ENST00000509006 ESR2Q92731 530 aa1.88□□□□□ -2.11
DEPDC1B-204ENST00000509006 TFGQ92734 400 aaPredicted RBP1.88□□□□□ -2.11
DEPDC1B-204ENST00000509006 RORBQ92753 470 aa1.88□□□□□ -2.11
DEPDC1B-204ENST00000509006 FRAT1Q92837 279 aaPredicted RBP1.88□□□□□ -2.11
DEPDC1B-204ENST00000509006 CDS1Q92903 461 aa1.88□□□□□ -2.11
DEPDC1B-204ENST00000509006 FGF11Q92914 225 aa1.88□□□□□ -2.11
DEPDC1B-204ENST00000509006 NEIL2Q969S2 332 aa1.88□□□□□ -2.11
DEPDC1B-204ENST00000509006 PSMG2Q969U7 264 aa1.88□□□□□ -2.11
DEPDC1B-204ENST00000509006 TMEM230Q96A57 120 aa1.88□□□□□ -2.11
DEPDC1B-204ENST00000509006 NABP1Q96AH0 204 aa1.88□□□□□ -2.11
DEPDC1B-204ENST00000509006 RPEQ96AT9 228 aa1.88□□□□□ -2.11
DEPDC1B-204ENST00000509006 CCDC127Q96BQ5 260 aa1.88□□□□□ -2.11
DEPDC1B-204ENST00000509006 NTNG2Q96CW9 530 aa1.88□□□□□ -2.11
DEPDC1B-204ENST00000509006 RAB3CQ96E17 227 aa1.88□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms