RNA–Protein interactions for RNA: ENST00000508848.5

POLR2J3-213, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 5

Gene POLR2J3, Length 1,030 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-213ENST00000508848 FAM209AQ5JX71 171 aa9.14□□□□□ -0.95
POLR2J3-213ENST00000508848 KDM4DQ6B0I6 523 aa9.14□□□□□ -0.95
POLR2J3-213ENST00000508848 LEG1Q6P5S2 330 aa9.14□□□□□ -0.95
POLR2J3-213ENST00000508848 KRTAP1-3Q8IUG1 177 aa9.14□□□□□ -0.95
POLR2J3-213ENST00000508848 TEX47Q8TBZ9 253 aa9.14□□□□□ -0.95
POLR2J3-213ENST00000508848 MRPL24Q96A35 216 aaKnown RBP9.14□□□□□ -0.95
POLR2J3-213ENST00000508848 PLA2G12AQ9BZM1 189 aa9.14□□□□□ -0.95
POLR2J3-213ENST00000508848 MARCH7Q9H992 704 aa9.14□□□□□ -0.95
POLR2J3-213ENST00000508848 ELOVL3Q9HB03 270 aa9.14□□□□□ -0.95
POLR2J3-213ENST00000508848 CDH20Q9HBT6 801 aa9.14□□□□□ -0.95
POLR2J3-213ENST00000508848 SLC25A19Q9HC21 320 aa9.14□□□□□ -0.95
POLR2J3-213ENST00000508848 SRA1Q9HD15 236 aaKnown RBP9.14□□□□□ -0.95
POLR2J3-213ENST00000508848 MYOZ1Q9NP98 299 aaPredicted RBP9.14□□□□□ -0.95
POLR2J3-213ENST00000508848 EIF3KQ9UBQ5 218 aaKnown RBP9.14□□□□□ -0.95
POLR2J3-213ENST00000508848 CYB5R1Q9UHQ9 305 aa9.14□□□□□ -0.95
POLR2J3-213ENST00000508848 GPR160Q9UJ42 338 aa9.14□□□□□ -0.95
POLR2J3-213ENST00000508848 LOC100509620A0A075B734 347 aa9.13□□□□□ -0.95
POLR2J3-213ENST00000508848 A0A1W2PPL8 197 aa9.13□□□□□ -0.95
POLR2J3-213ENST00000508848 OR6C6A6NF89 314 aa9.13□□□□□ -0.95
POLR2J3-213ENST00000508848 RIIAD1A6NNX1 92 aa9.13□□□□□ -0.95
POLR2J3-213ENST00000508848 SGCEO43556 437 aa9.13□□□□□ -0.95
POLR2J3-213ENST00000508848 SYNGR3O43761 229 aa9.13□□□□□ -0.95
POLR2J3-213ENST00000508848 F12P00748 615 aaPredicted RBP9.13□□□□□ -0.95
POLR2J3-213ENST00000508848 IGHV3-13P01766 116 aa9.13□□□□□ -0.95
POLR2J3-213ENST00000508848 SCG5P05408 212 aa9.13□□□□□ -0.95
POLR2J3-213ENST00000508848 OR4A8P0C604 315 aa9.13□□□□□ -0.95
POLR2J3-213ENST00000508848 ZNF3P17036 446 aa9.13□□□□□ -0.95
POLR2J3-213ENST00000508848 APEX1P27695 318 aaKnown RBP9.13□□□□□ -0.95
POLR2J3-213ENST00000508848 GGT2P36268 569 aa9.13□□□□□ -0.95
POLR2J3-213ENST00000508848 LIPAP38571 399 aa9.13□□□□□ -0.95
POLR2J3-213ENST00000508848 GDI2P50395 445 aaKnown RBP9.13□□□□□ -0.95
POLR2J3-213ENST00000508848 EFNA4P52798 201 aa9.13□□□□□ -0.95
POLR2J3-213ENST00000508848 ATP5J2P56134 94 aa9.13□□□□□ -0.95
POLR2J3-213ENST00000508848 SNRPD2P62316 118 aaKnown RBP9.13□□□□□ -0.95
POLR2J3-213ENST00000508848 EFNB1P98172 346 aa9.13□□□□□ -0.95
POLR2J3-213ENST00000508848 TEKQ02763 1124 aa9.13□□□□□ -0.95
POLR2J3-213ENST00000508848 RAB35Q15286 201 aa9.13□□□□□ -0.95
POLR2J3-213ENST00000508848 KRTAP27-1Q3LI81 207 aa9.13□□□□□ -0.95
POLR2J3-213ENST00000508848 SLC35F1Q5T1Q4 408 aa9.13□□□□□ -0.95
POLR2J3-213ENST00000508848 COLCA1Q6ZS62 124 aa9.13□□□□□ -0.95
POLR2J3-213ENST00000508848 ATG16L2Q8NAA4 619 aa9.13□□□□□ -0.95
POLR2J3-213ENST00000508848 SLC37A3Q8NCC5 494 aa9.13□□□□□ -0.95
POLR2J3-213ENST00000508848 OR4Q3Q8NH05 313 aa9.13□□□□□ -0.95
POLR2J3-213ENST00000508848 NEU4Q8WWR8 484 aaPredicted RBP9.13□□□□□ -0.95
POLR2J3-213ENST00000508848 C11orf40Q8WZ69 217 aa9.13□□□□□ -0.95
POLR2J3-213ENST00000508848 PTP4A1Q93096 173 aa9.13□□□□□ -0.95
POLR2J3-213ENST00000508848 ITFG2Q969R8 447 aa9.13□□□□□ -0.95
POLR2J3-213ENST00000508848 HDHD2Q9H0R4 259 aa9.13□□□□□ -0.95
POLR2J3-213ENST00000508848 FN3KQ9H479 309 aa9.13□□□□□ -0.95
POLR2J3-213ENST00000508848 RPRD1BQ9NQG5 326 aaKnown RBP9.13□□□□□ -0.95
POLR2J3-213ENST00000508848 PAPOLBQ9NRJ5 636 aaKnown RBP9.13□□□□□ -0.95
POLR2J3-213ENST00000508848 TBC1D23Q9NUY8 699 aa9.13□□□□□ -0.95
POLR2J3-213ENST00000508848 NKIRAS2Q9NYR9 191 aa9.13□□□□□ -0.95
POLR2J3-213ENST00000508848 CGGBP1Q9UFW8 167 aaPredicted RBP9.13□□□□□ -0.95
POLR2J3-213ENST00000508848 ITGB1BP2Q9UKP3 347 aa9.13□□□□□ -0.95
POLR2J3-213ENST00000508848 H3BN98 237 aa9.12□□□□□ -0.95
POLR2J3-213ENST00000508848 H7C1C5 153 aa9.12□□□□□ -0.95
POLR2J3-213ENST00000508848 PRODHO43272 600 aa9.12□□□□□ -0.95
POLR2J3-213ENST00000508848 TFP02787 698 aa9.12□□□□□ -0.95
POLR2J3-213ENST00000508848 CSF3P09919 207 aa9.12□□□□□ -0.95
POLR2J3-213ENST00000508848 PAICSP22234 425 aaKnown RBP9.12□□□□□ -0.95
POLR2J3-213ENST00000508848 PRKACGP22612 351 aa9.12□□□□□ -0.95
POLR2J3-213ENST00000508848 FMO3P31513 532 aa9.12□□□□□ -0.95
POLR2J3-213ENST00000508848 RGS6P49758 472 aa9.12□□□□□ -0.95
POLR2J3-213ENST00000508848 DAPP51397 102 aa9.12□□□□□ -0.95
POLR2J3-213ENST00000508848 CRISP1P54107 249 aa9.12□□□□□ -0.95
POLR2J3-213ENST00000508848 LCN6P62502 163 aa9.12□□□□□ -0.95
POLR2J3-213ENST00000508848 MRPS11P82912 194 aaKnown RBP9.12□□□□□ -0.95
POLR2J3-213ENST00000508848 SNTB2Q13425 540 aaKnown RBP9.12□□□□□ -0.95
POLR2J3-213ENST00000508848 GINS1Q14691 196 aa9.12□□□□□ -0.95
POLR2J3-213ENST00000508848 CLEC12AQ5QGZ9 265 aa9.12□□□□□ -0.95
POLR2J3-213ENST00000508848 MBNL2Q5VZF2 373 aaKnown RBP9.12□□□□□ -0.95
POLR2J3-213ENST00000508848 ACSM5Q6NUN0 579 aa9.12□□□□□ -0.95
POLR2J3-213ENST00000508848 UGT2A3Q6UWM9 527 aa9.12□□□□□ -0.95
POLR2J3-213ENST00000508848 VASH1Q7L8A9 365 aaPredicted RBP9.12□□□□□ -0.95
POLR2J3-213ENST00000508848 SDR9C7Q8NEX9 313 aa9.12□□□□□ -0.95
POLR2J3-213ENST00000508848 OR10H5Q8NGA6 315 aa9.12□□□□□ -0.95
POLR2J3-213ENST00000508848 OR1F12Q8NHA8 337 aa9.12□□□□□ -0.95
POLR2J3-213ENST00000508848 C4orf45Q96LM5 186 aa9.12□□□□□ -0.95
POLR2J3-213ENST00000508848 TSSK2Q96PF2 358 aa9.12□□□□□ -0.95
POLR2J3-213ENST00000508848 COQ7Q99807 217 aa9.12□□□□□ -0.95
POLR2J3-213ENST00000508848 PRRG3Q9BZD7 231 aa9.12□□□□□ -0.95
POLR2J3-213ENST00000508848 RAB1BQ9H0U4 201 aa9.12□□□□□ -0.95
POLR2J3-213ENST00000508848 DLL4Q9NR61 685 aa9.12□□□□□ -0.95
POLR2J3-213ENST00000508848 SLCO1C1Q9NYB5 712 aa9.12□□□□□ -0.95
POLR2J3-213ENST00000508848 LHFPL6Q9Y693 200 aa9.12□□□□□ -0.95
POLR2J3-213ENST00000508848 TLN2Q9Y4G6 2542 aa9.12□□□□□ -0.95
POLR2J3-213ENST00000508848 ZNF469Q96JG9 3925 aaPredicted RBP9.12□□□□□ -0.95
POLR2J3-213ENST00000508848 SETD2Q9BYW2 2564 aaPredicted RBP9.11□□□□□ -0.95
POLR2J3-213ENST00000508848 FAM171A2A8MVW0 826 aa9.11□□□□□ -0.95
POLR2J3-213ENST00000508848 NDUFS8O00217 210 aa9.11□□□□□ -0.95
POLR2J3-213ENST00000508848 SURF4O15260 269 aa9.11□□□□□ -0.95
POLR2J3-213ENST00000508848 MPZL1O95297 269 aa9.11□□□□□ -0.95
POLR2J3-213ENST00000508848 ERCC1P07992 297 aaPredicted RBP9.11□□□□□ -0.95
POLR2J3-213ENST00000508848 ADH4P08319 380 aa9.11□□□□□ -0.95
POLR2J3-213ENST00000508848 ZNF823P16415 610 aa9.11□□□□□ -0.95
POLR2J3-213ENST00000508848 OTX1P32242 354 aaPredicted RBP9.11□□□□□ -0.95
POLR2J3-213ENST00000508848 NUDT6P53370 316 aa9.11□□□□□ -0.95
POLR2J3-213ENST00000508848 PPP2R2BQ00005 443 aa9.11□□□□□ -0.95
POLR2J3-213ENST00000508848 CRMP1Q14194 572 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms