RNA–Protein interactions for RNA: ENST00000508499.5

USP46-207, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2 BASIC

Gene USP46, Length 1,419 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-207ENST00000508499 EGR3Q06889 387 aa7.54□□□□□ -1.2
USP46-207ENST00000508499 FAM27E3Q08E93 113 aa7.54□□□□□ -1.2
USP46-207ENST00000508499 SCRN3Q0VDG4 424 aa7.54□□□□□ -1.2
USP46-207ENST00000508499 ECH1Q13011 328 aa7.54□□□□□ -1.2
USP46-207ENST00000508499 CDSNQ15517 529 aa7.54□□□□□ -1.2
USP46-207ENST00000508499 KLHL12Q53G59 568 aa7.54□□□□□ -1.2
USP46-207ENST00000508499 KLHL24Q6TFL4 600 aa7.54□□□□□ -1.2
USP46-207ENST00000508499 SEZ6L2Q6UXD5 910 aa7.54□□□□□ -1.2
USP46-207ENST00000508499 BCDIN3DQ7Z5W3 292 aaKnown RBP7.54□□□□□ -1.2
USP46-207ENST00000508499 SKA3Q8IX90 412 aa7.54□□□□□ -1.2
USP46-207ENST00000508499 WDR31Q8NA23 367 aa7.54□□□□□ -1.2
USP46-207ENST00000508499 HAVCR2Q8TDQ0 301 aa7.54□□□□□ -1.2
USP46-207ENST00000508499 SSC4DQ8WTU2 575 aa7.54□□□□□ -1.2
USP46-207ENST00000508499 ASB17Q8WXJ9 295 aa7.54□□□□□ -1.2
USP46-207ENST00000508499 NSMAFQ92636 917 aa7.54□□□□□ -1.2
USP46-207ENST00000508499 FBXO17Q96EF6 278 aa7.54□□□□□ -1.2
USP46-207ENST00000508499 ZNF649Q9BS31 505 aa7.54□□□□□ -1.2
USP46-207ENST00000508499 HDHD2Q9H0R4 259 aa7.54□□□□□ -1.2
USP46-207ENST00000508499 KCNN2Q9H2S1 579 aa7.54□□□□□ -1.2
USP46-207ENST00000508499 C1orf198Q9H425 327 aa7.54□□□□□ -1.2
USP46-207ENST00000508499 CCNB1IP1Q9NPC3 277 aa7.54□□□□□ -1.2
USP46-207ENST00000508499 UBAP1Q9NZ09 502 aa7.54□□□□□ -1.2
USP46-207ENST00000508499 DIMT1Q9UNQ2 313 aaKnown RBP7.54□□□□□ -1.2
USP46-207ENST00000508499 TPRKBQ9Y3C4 175 aa7.54□□□□□ -1.2
USP46-207ENST00000508499 TIMM10BQ9Y5J6 103 aa7.54□□□□□ -1.2
USP46-207ENST00000508499 ADGRG4Q8IZF6 3080 aa7.54□□□□□ -1.2
USP46-207ENST00000508499 USP9XQ93008 2570 aaPredicted RBP7.54□□□□□ -1.2
USP46-207ENST00000508499 A0A1W2PPL8 197 aa7.53□□□□□ -1.2
USP46-207ENST00000508499 CIB4A0PJX0 185 aa7.53□□□□□ -1.2
USP46-207ENST00000508499 J3QW42 95 aa7.53□□□□□ -1.2
USP46-207ENST00000508499 ZNF593O00488 134 aaPredicted RBP7.53□□□□□ -1.2
USP46-207ENST00000508499 ZNF254O75437 659 aa7.53□□□□□ -1.2
USP46-207ENST00000508499 RAD51DO75771 328 aa7.53□□□□□ -1.2
USP46-207ENST00000508499 ZNF14P17017 642 aaPredicted RBP7.53□□□□□ -1.2
USP46-207ENST00000508499 IL32P24001 234 aa7.53□□□□□ -1.2
USP46-207ENST00000508499 HOXC12P31275 282 aa7.53□□□□□ -1.2
USP46-207ENST00000508499 RPS7P62081 194 aaKnown RBP7.53□□□□□ -1.2
USP46-207ENST00000508499 SMN1Q16637 294 aaKnown RBP7.53□□□□□ -1.2
USP46-207ENST00000508499 GSG1Q2KHT4 349 aa7.53□□□□□ -1.2
USP46-207ENST00000508499 KRTAP27-1Q3LI81 207 aa7.53□□□□□ -1.2
USP46-207ENST00000508499 KCTD21Q4G0X4 260 aa7.53□□□□□ -1.2
USP46-207ENST00000508499 ZNF684Q5T5D7 378 aa7.53□□□□□ -1.2
USP46-207ENST00000508499 KCTD18Q6PI47 426 aaPredicted RBP7.53□□□□□ -1.2
USP46-207ENST00000508499 UGT2A3Q6UWM9 527 aa7.53□□□□□ -1.2
USP46-207ENST00000508499 SLC16A14Q7RTX9 510 aa7.53□□□□□ -1.2
USP46-207ENST00000508499 DPY19L4Q7Z388 723 aa7.53□□□□□ -1.2
USP46-207ENST00000508499 KCTD20Q7Z5Y7 419 aa7.53□□□□□ -1.2
USP46-207ENST00000508499 C1orf174Q8IYL3 243 aa7.53□□□□□ -1.2
USP46-207ENST00000508499 ALDH16A1Q8IZ83 802 aa7.53□□□□□ -1.2
USP46-207ENST00000508499 ACBD7Q8N6N7 88 aa7.53□□□□□ -1.2
USP46-207ENST00000508499 IL17RDQ8NFM7 739 aa7.53□□□□□ -1.2
USP46-207ENST00000508499 OR10H5Q8NGA6 315 aa7.53□□□□□ -1.2
USP46-207ENST00000508499 OR51L1Q8NGJ5 315 aa7.53□□□□□ -1.2
USP46-207ENST00000508499 RNF133Q8WVZ7 376 aa7.53□□□□□ -1.2
USP46-207ENST00000508499 ITFG2Q969R8 447 aa7.53□□□□□ -1.2
USP46-207ENST00000508499 S100PBPQ96BU1 408 aa7.53□□□□□ -1.2
USP46-207ENST00000508499 MUCL1Q96DR8 90 aa7.53□□□□□ -1.2
USP46-207ENST00000508499 LGALS12Q96DT0 336 aa7.53□□□□□ -1.2
USP46-207ENST00000508499 ZMYND19Q96E35 227 aaPredicted RBP7.53□□□□□ -1.2
USP46-207ENST00000508499 RNFT2Q96EX2 444 aa7.53□□□□□ -1.2
USP46-207ENST00000508499 CNBD2Q96M20 576 aa7.53□□□□□ -1.2
USP46-207ENST00000508499 DACH2Q96NX9 599 aa7.53□□□□□ -1.2
USP46-207ENST00000508499 NR1H4Q96RI1 486 aaPredicted RBP7.53□□□□□ -1.2
USP46-207ENST00000508499 CDCA4Q9BXL8 241 aa7.53□□□□□ -1.2
USP46-207ENST00000508499 ACTR6Q9GZN1 396 aa7.53□□□□□ -1.2
USP46-207ENST00000508499 NIPAL2Q9H841 368 aa7.53□□□□□ -1.2
USP46-207ENST00000508499 SEC61A2Q9H9S3 476 aa7.53□□□□□ -1.2
USP46-207ENST00000508499 PNRC2Q9NPJ4 139 aaKnown RBP7.53□□□□□ -1.2
USP46-207ENST00000508499 SCN3BQ9NY72 215 aa7.53□□□□□ -1.2
USP46-207ENST00000508499 NDRG3Q9UGV2 375 aa7.53□□□□□ -1.2
USP46-207ENST00000508499 NKX2-6A6NCS4 301 aa7.52□□□□□ -1.2
USP46-207ENST00000508499 OR6C6A6NF89 314 aa7.52□□□□□ -1.2
USP46-207ENST00000508499 SYNGR3O43761 229 aa7.52□□□□□ -1.2
USP46-207ENST00000508499 SELENOFO60613 162 aa7.52□□□□□ -1.2
USP46-207ENST00000508499 SULT1C4O75897 302 aa7.52□□□□□ -1.2
USP46-207ENST00000508499 AGFG2O95081 481 aa7.52□□□□□ -1.2
USP46-207ENST00000508499 MPZL1O95297 269 aa7.52□□□□□ -1.2
USP46-207ENST00000508499 RAB36O95755 333 aa7.52□□□□□ -1.2
USP46-207ENST00000508499 HLA-DQA2P01906 255 aa7.52□□□□□ -1.2
USP46-207ENST00000508499 SERPINA5P05154 406 aa7.52□□□□□ -1.2
USP46-207ENST00000508499 LYNP07948 512 aa7.52□□□□□ -1.2
USP46-207ENST00000508499 ZNF32P17041 273 aa7.52□□□□□ -1.2
USP46-207ENST00000508499 UBE2NP61088 152 aaKnown RBP7.52□□□□□ -1.2
USP46-207ENST00000508499 ACTA2P62736 377 aa7.52□□□□□ -1.2
USP46-207ENST00000508499 RAB1AP62820 205 aa7.52□□□□□ -1.2
USP46-207ENST00000508499 ACTG2P63267 376 aa7.52□□□□□ -1.2
USP46-207ENST00000508499 PSG4Q00888 419 aa7.52□□□□□ -1.2
USP46-207ENST00000508499 MRPL28Q13084 256 aaKnown RBP7.52□□□□□ -1.2
USP46-207ENST00000508499 PPA1Q15181 289 aa7.52□□□□□ -1.2
USP46-207ENST00000508499 RAB35Q15286 201 aa7.52□□□□□ -1.2
USP46-207ENST00000508499 TAB1Q15750 504 aa7.52□□□□□ -1.2
USP46-207ENST00000508499 SGCAQ16586 387 aa7.52□□□□□ -1.2
USP46-207ENST00000508499 MEP1BQ16820 701 aa7.52□□□□□ -1.2
USP46-207ENST00000508499 HIKESHIQ53FT3 197 aa7.52□□□□□ -1.2
USP46-207ENST00000508499 ELFN2Q5R3F8 820 aa7.52□□□□□ -1.2
USP46-207ENST00000508499 TMEM53Q6P2H8 277 aa7.52□□□□□ -1.2
USP46-207ENST00000508499 PRSS48Q7RTY5 328 aa7.52□□□□□ -1.2
USP46-207ENST00000508499 ERI1Q8IV48 349 aaKnown RBP7.52□□□□□ -1.2
USP46-207ENST00000508499 SLC35F2Q8IXU6 374 aa7.52□□□□□ -1.2
USP46-207ENST00000508499 SYS1Q8N2H4 156 aa7.52□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms