RNA–Protein interactions for RNA: ENST00000508274.5

RAB28-205, Transcript of RAB28, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB28, Length 1,551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-205ENST00000508274 RERGLQ9H628 205 aa12.15□□□□□ -0.46
RAB28-205ENST00000508274 NRIP3Q9NQ35 241 aa12.15□□□□□ -0.46
RAB28-205ENST00000508274 ARL8BQ9NVJ2 186 aa12.15□□□□□ -0.46
RAB28-205ENST00000508274 NKIRAS2Q9NYR9 191 aa12.15□□□□□ -0.46
RAB28-205ENST00000508274 IER3IP1Q9Y5U9 82 aa12.15□□□□□ -0.46
RAB28-205ENST00000508274 B4DSR2 109 aa12.14□□□□□ -0.47
RAB28-205ENST00000508274 SLC16A7O60669 478 aa12.14□□□□□ -0.47
RAB28-205ENST00000508274 ICMTO60725 284 aa12.14□□□□□ -0.47
RAB28-205ENST00000508274 GAAP10253 952 aa12.14□□□□□ -0.47
RAB28-205ENST00000508274 RBMXP38159 391 aaKnown RBP12.14□□□□□ -0.47
RAB28-205ENST00000508274 CRYBB2P43320 205 aa12.14□□□□□ -0.47
RAB28-205ENST00000508274 HTR5AP47898 357 aa12.14□□□□□ -0.47
RAB28-205ENST00000508274 DVL1P1P54792 670 aaPredicted RBP12.14□□□□□ -0.47
RAB28-205ENST00000508274 LMO4P61968 165 aa12.14□□□□□ -0.47
RAB28-205ENST00000508274 GNGT1P63211 74 aa12.14□□□□□ -0.47
RAB28-205ENST00000508274 SPRNQ5BIV9 151 aa12.14□□□□□ -0.47
RAB28-205ENST00000508274 VASH1Q7L8A9 365 aaPredicted RBP12.14□□□□□ -0.47
RAB28-205ENST00000508274 SYT9Q86SS6 491 aa12.14□□□□□ -0.47
RAB28-205ENST00000508274 SLC7A6Q92536 515 aa12.14□□□□□ -0.47
RAB28-205ENST00000508274 GORASP2Q9H8Y8 452 aa12.14□□□□□ -0.47
RAB28-205ENST00000508274 SAP30LQ9HAJ7 183 aa12.14□□□□□ -0.47
RAB28-205ENST00000508274 DECR2Q9NUI1 292 aa12.14□□□□□ -0.47
RAB28-205ENST00000508274 AURKCQ9UQB9 309 aa12.14□□□□□ -0.47
RAB28-205ENST00000508274 COA3Q9Y2R0 106 aaPredicted RBP12.14□□□□□ -0.47
RAB28-205ENST00000508274 SGCEO43556 437 aa12.13□□□□□ -0.47
RAB28-205ENST00000508274 GMNNO75496 209 aa12.13□□□□□ -0.47
RAB28-205ENST00000508274 ABHD16AO95870 558 aa12.13□□□□□ -0.47
RAB28-205ENST00000508274 GPANK1O95872 356 aa12.13□□□□□ -0.47
RAB28-205ENST00000508274 TFP02787 698 aa12.13□□□□□ -0.47
RAB28-205ENST00000508274 MT-ND5P03915 603 aa12.13□□□□□ -0.47
RAB28-205ENST00000508274 HSD17B1P14061 328 aa12.13□□□□□ -0.47
RAB28-205ENST00000508274 CDKN2AP42771 156 aaKnown RBP12.13□□□□□ -0.47
RAB28-205ENST00000508274 SPIBQ01892 262 aa12.13□□□□□ -0.47
RAB28-205ENST00000508274 SCRN3Q0VDG4 424 aa12.13□□□□□ -0.47
RAB28-205ENST00000508274 KRT72Q14CN4 511 aa12.13□□□□□ -0.47
RAB28-205ENST00000508274 MOGQ16653 247 aa12.13□□□□□ -0.47
RAB28-205ENST00000508274 PGAM4Q8N0Y7 254 aa12.13□□□□□ -0.47
RAB28-205ENST00000508274 PYURFQ96I23 114 aa12.13□□□□□ -0.47
RAB28-205ENST00000508274 TSSK2Q96PF2 358 aa12.13□□□□□ -0.47
RAB28-205ENST00000508274 REPIN1Q9BWE0 567 aaKnown RBP12.13□□□□□ -0.47
RAB28-205ENST00000508274 NDEL1Q9GZM8 345 aa12.13□□□□□ -0.47
RAB28-205ENST00000508274 NUAK2Q9H093 628 aa12.13□□□□□ -0.47
RAB28-205ENST00000508274 MSL2Q9HCI7 577 aa12.13□□□□□ -0.47
RAB28-205ENST00000508274 CD300AQ9UGN4 299 aa12.13□□□□□ -0.47
RAB28-205ENST00000508274 MAGEL2Q9UJ55 1249 aa12.13□□□□□ -0.47
RAB28-205ENST00000508274 ARHGAP32A7KAX9 2087 aa12.13□□□□□ -0.47
RAB28-205ENST00000508274 PLSCR5A0PG75 271 aa12.13□□□□□ -0.47
RAB28-205ENST00000508274 UNC119BA6NIH7 251 aa12.13□□□□□ -0.47
RAB28-205ENST00000508274 ARPC2O15144 300 aa12.13□□□□□ -0.47
RAB28-205ENST00000508274 AHCYL1O43865 530 aa12.13□□□□□ -0.47
RAB28-205ENST00000508274 GADD45GO95257 159 aa12.13□□□□□ -0.47
RAB28-205ENST00000508274 PPP1R3DO95685 299 aa12.13□□□□□ -0.47
RAB28-205ENST00000508274 MSMBP08118 114 aa12.13□□□□□ -0.47
RAB28-205ENST00000508274 THBS2P35442 1172 aa12.13□□□□□ -0.47
RAB28-205ENST00000508274 GPR139Q6DWJ6 353 aa12.13□□□□□ -0.47
RAB28-205ENST00000508274 UNQ6126/PRO20091Q6UXV3 157 aa12.13□□□□□ -0.47
RAB28-205ENST00000508274 ZER1Q7Z7L7 766 aa12.13□□□□□ -0.47
RAB28-205ENST00000508274 GLCCI1Q86VQ1 547 aa12.13□□□□□ -0.47
RAB28-205ENST00000508274 FANK1Q8TC84 345 aa12.13□□□□□ -0.47
RAB28-205ENST00000508274 CDRT15Q96T59 188 aa12.13□□□□□ -0.47
RAB28-205ENST00000508274 ELOVL3Q9HB03 270 aa12.13□□□□□ -0.47
RAB28-205ENST00000508274 HIF1ANQ9NWT6 349 aa12.13□□□□□ -0.47
RAB28-205ENST00000508274 PLEK2Q9NYT0 353 aa12.13□□□□□ -0.47
RAB28-205ENST00000508274 VSX1Q9NZR4 365 aaPredicted RBP12.13□□□□□ -0.47
RAB28-205ENST00000508274 ASH2LQ9UBL3 628 aa12.13□□□□□ -0.47
RAB28-205ENST00000508274 TAGLN3Q9UI15 199 aa12.13□□□□□ -0.47
RAB28-205ENST00000508274 NDRG4Q9ULP0 352 aaKnown RBP12.13□□□□□ -0.47
RAB28-205ENST00000508274 WIPI2Q9Y4P8 454 aa12.13□□□□□ -0.47
RAB28-205ENST00000508274 FBN3Q75N90 2809 aa12.13□□□□□ -0.47
RAB28-205ENST00000508274 DCTN6O00399 190 aa12.12□□□□□ -0.47
RAB28-205ENST00000508274 KHDRBS3O75525 346 aaKnown RBP12.12□□□□□ -0.47
RAB28-205ENST00000508274 COX5BP10606 129 aa12.12□□□□□ -0.47
RAB28-205ENST00000508274 ITGA2P17301 1181 aa12.12□□□□□ -0.47
RAB28-205ENST00000508274 SRP14P37108 136 aaKnown RBP12.12□□□□□ -0.47
RAB28-205ENST00000508274 ARHGDIAP52565 204 aa12.12□□□□□ -0.47
RAB28-205ENST00000508274 PSG7Q13046 419 aa12.12□□□□□ -0.47
RAB28-205ENST00000508274 AQP6Q13520 282 aa12.12□□□□□ -0.47
RAB28-205ENST00000508274 CCDC92Q53HC0 331 aaPredicted RBP12.12□□□□□ -0.47
RAB28-205ENST00000508274 FAM209AQ5JX71 171 aa12.12□□□□□ -0.47
RAB28-205ENST00000508274 SAMD4BQ5PRF9 694 aaKnown RBP12.12□□□□□ -0.47
RAB28-205ENST00000508274 SMARCD3Q6STE5 483 aa12.12□□□□□ -0.47
RAB28-205ENST00000508274 DPY19L2P2Q6ZN68 376 aa12.12□□□□□ -0.47
RAB28-205ENST00000508274 ZNF771Q7L3S4 317 aaPredicted RBP12.12□□□□□ -0.47
RAB28-205ENST00000508274 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.12□□□□□ -0.47
RAB28-205ENST00000508274 GLB1L2Q8IW92 636 aa12.12□□□□□ -0.47
RAB28-205ENST00000508274 TMEM186Q96B77 213 aa12.12□□□□□ -0.47
RAB28-205ENST00000508274 NSMCE2Q96MF7 247 aa12.12□□□□□ -0.47
RAB28-205ENST00000508274 KRCC1Q9NPI7 259 aaPredicted RBP12.12□□□□□ -0.47
RAB28-205ENST00000508274 KLHL21Q9UJP4 597 aa12.12□□□□□ -0.47
RAB28-205ENST00000508274 GRIP1Q9Y3R0 1128 aa12.12□□□□□ -0.47
RAB28-205ENST00000508274 WNK2Q9Y3S1 2297 aa12.12□□□□□ -0.47
RAB28-205ENST00000508274 DYSFO75923 2080 aa12.12□□□□□ -0.47
RAB28-205ENST00000508274 CLDN25C9JDP6 229 aa12.11□□□□□ -0.47
RAB28-205ENST00000508274 H3BSA7 217 aa12.11□□□□□ -0.47
RAB28-205ENST00000508274 RER1O15258 196 aa12.11□□□□□ -0.47
RAB28-205ENST00000508274 TIMM8AO60220 97 aaPredicted RBP12.11□□□□□ -0.47
RAB28-205ENST00000508274 UBOX5O94941 541 aa12.11□□□□□ -0.47
RAB28-205ENST00000508274 TXNDC12O95881 172 aa12.11□□□□□ -0.47
RAB28-205ENST00000508274 DBHP09172 617 aa12.11□□□□□ -0.47
RAB28-205ENST00000508274 RRM2P31350 389 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms