RNA–Protein interactions for RNA: ENST00000506632.2

PDLIM5-209, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 907 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-209ENST00000506632 KCNMB1Q16558 191 aa7.73□□□□□ -1.17
PDLIM5-209ENST00000506632 MOGQ16653 247 aa7.73□□□□□ -1.17
PDLIM5-209ENST00000506632 ZNF718Q3SXZ3 478 aa7.73□□□□□ -1.17
PDLIM5-209ENST00000506632 FAM209AQ5JX71 171 aa7.73□□□□□ -1.17
PDLIM5-209ENST00000506632 FAM120AOSQ5T036 256 aa7.73□□□□□ -1.17
PDLIM5-209ENST00000506632 UNQ6126/PRO20091Q6UXV3 157 aa7.73□□□□□ -1.17
PDLIM5-209ENST00000506632 DPY19L2P2Q6ZN68 376 aa7.73□□□□□ -1.17
PDLIM5-209ENST00000506632 ZER1Q7Z7L7 766 aa7.73□□□□□ -1.17
PDLIM5-209ENST00000506632 ADCK1Q86TW2 530 aa7.73□□□□□ -1.17
PDLIM5-209ENST00000506632 DEFB107AQ8IZN7 70 aa7.73□□□□□ -1.17
PDLIM5-209ENST00000506632 LINC01356Q8N9X3 169 aa7.73□□□□□ -1.17
PDLIM5-209ENST00000506632 ICA1LQ8NDH6 482 aa7.73□□□□□ -1.17
PDLIM5-209ENST00000506632 OR52J3Q8NH60 311 aa7.73□□□□□ -1.17
PDLIM5-209ENST00000506632 CLDND2Q8NHS1 167 aa7.73□□□□□ -1.17
PDLIM5-209ENST00000506632 SLC25A40Q8TBP6 338 aa7.73□□□□□ -1.17
PDLIM5-209ENST00000506632 KLF14Q8TD94 323 aaPredicted RBP7.73□□□□□ -1.17
PDLIM5-209ENST00000506632 SNX33Q8WV41 574 aa7.73□□□□□ -1.17
PDLIM5-209ENST00000506632 IPCEF1Q8WWN9 437 aaPredicted RBP7.73□□□□□ -1.17
PDLIM5-209ENST00000506632 NSMCE2Q96MF7 247 aa7.73□□□□□ -1.17
PDLIM5-209ENST00000506632 OR2J1Q9GZK6 312 aa7.73□□□□□ -1.17
PDLIM5-209ENST00000506632 SYT4Q9H2B2 425 aa7.73□□□□□ -1.17
PDLIM5-209ENST00000506632 EMC7Q9NPA0 242 aa7.73□□□□□ -1.17
PDLIM5-209ENST00000506632 IL1RAPQ9NPH3 570 aa7.73□□□□□ -1.17
PDLIM5-209ENST00000506632 KRCC1Q9NPI7 259 aaPredicted RBP7.73□□□□□ -1.17
PDLIM5-209ENST00000506632 NDE1Q9NXR1 346 aa7.73□□□□□ -1.17
PDLIM5-209ENST00000506632 EIF3KQ9UBQ5 218 aaKnown RBP7.73□□□□□ -1.17
PDLIM5-209ENST00000506632 IL20RAQ9UHF4 553 aa7.73□□□□□ -1.17
PDLIM5-209ENST00000506632 KLHL21Q9UJP4 597 aa7.73□□□□□ -1.17
PDLIM5-209ENST00000506632 NDRG4Q9ULP0 352 aaKnown RBP7.73□□□□□ -1.17
PDLIM5-209ENST00000506632 AURKCQ9UQB9 309 aa7.73□□□□□ -1.17
PDLIM5-209ENST00000506632 IER3IP1Q9Y5U9 82 aa7.73□□□□□ -1.17
PDLIM5-209ENST00000506632 V9GYQ6 96 aa7.73□□□□□ -1.17
PDLIM5-209ENST00000506632 OR6C6A6NF89 314 aa7.72□□□□□ -1.17
PDLIM5-209ENST00000506632 ZSCAN5BA6NJL1 495 aa7.72□□□□□ -1.17
PDLIM5-209ENST00000506632 DCTN6O00399 190 aa7.72□□□□□ -1.17
PDLIM5-209ENST00000506632 SOCS2O14508 198 aa7.72□□□□□ -1.17
PDLIM5-209ENST00000506632 WNT9BO14905 357 aa7.72□□□□□ -1.17
PDLIM5-209ENST00000506632 ARPC3O15145 178 aa7.72□□□□□ -1.17
PDLIM5-209ENST00000506632 SGCEO43556 437 aa7.72□□□□□ -1.17
PDLIM5-209ENST00000506632 SLC16A7O60669 478 aa7.72□□□□□ -1.17
PDLIM5-209ENST00000506632 KHDRBS3O75525 346 aaKnown RBP7.72□□□□□ -1.17
PDLIM5-209ENST00000506632 GADD45GO95257 159 aa7.72□□□□□ -1.17
PDLIM5-209ENST00000506632 IGHV1-46P01743 117 aa7.72□□□□□ -1.17
PDLIM5-209ENST00000506632 TFP02787 698 aa7.72□□□□□ -1.17
PDLIM5-209ENST00000506632 FABP3P05413 133 aa7.72□□□□□ -1.17
PDLIM5-209ENST00000506632 GAAP10253 952 aa7.72□□□□□ -1.17
PDLIM5-209ENST00000506632 FPR3P25089 353 aa7.72□□□□□ -1.17
PDLIM5-209ENST00000506632 GCH1P30793 250 aa7.72□□□□□ -1.17
PDLIM5-209ENST00000506632 CDKN2AP42771 156 aaKnown RBP7.72□□□□□ -1.17
PDLIM5-209ENST00000506632 GSSP48637 474 aa7.72□□□□□ -1.17
PDLIM5-209ENST00000506632 RPS6KA3P51812 740 aa7.72□□□□□ -1.17
PDLIM5-209ENST00000506632 HMGA2P52926 109 aa7.72□□□□□ -1.17
PDLIM5-209ENST00000506632 LMO4P61968 165 aa7.72□□□□□ -1.17
PDLIM5-209ENST00000506632 PPP1CBP62140 327 aa7.72□□□□□ -1.17
PDLIM5-209ENST00000506632 SPIBQ01892 262 aa7.72□□□□□ -1.17
PDLIM5-209ENST00000506632 GLO1Q04760 184 aa7.72□□□□□ -1.17
PDLIM5-209ENST00000506632 SCRN3Q0VDG4 424 aa7.72□□□□□ -1.17
PDLIM5-209ENST00000506632 CCNIQ14094 377 aa7.72□□□□□ -1.17
PDLIM5-209ENST00000506632 KRT72Q14CN4 511 aa7.72□□□□□ -1.17
PDLIM5-209ENST00000506632 CR1LQ2VPA4 569 aa7.72□□□□□ -1.17
PDLIM5-209ENST00000506632 RFX4Q33E94 735 aa7.72□□□□□ -1.17
PDLIM5-209ENST00000506632 C11orf91Q3C1V1 193 aa7.72□□□□□ -1.17
PDLIM5-209ENST00000506632 SPATA46Q5T0L3 261 aa7.72□□□□□ -1.17
PDLIM5-209ENST00000506632 TMEM154Q6P9G4 183 aa7.72□□□□□ -1.17
PDLIM5-209ENST00000506632 SMARCD3Q6STE5 483 aa7.72□□□□□ -1.17
PDLIM5-209ENST00000506632 C16orf89Q6UX73 402 aa7.72□□□□□ -1.17
PDLIM5-209ENST00000506632 IL17RELQ6ZVW7 336 aa7.72□□□□□ -1.17
PDLIM5-209ENST00000506632 GLB1L2Q8IW92 636 aa7.72□□□□□ -1.17
PDLIM5-209ENST00000506632 FITM2Q8N6M3 262 aa7.72□□□□□ -1.17
PDLIM5-209ENST00000506632 SPATA3Q8NHX4 192 aa7.72□□□□□ -1.17
PDLIM5-209ENST00000506632 ABHD4Q8TB40 342 aa7.72□□□□□ -1.17
PDLIM5-209ENST00000506632 C4orf45Q96LM5 186 aa7.72□□□□□ -1.17
PDLIM5-209ENST00000506632 NUAK2Q9H093 628 aa7.72□□□□□ -1.17
PDLIM5-209ENST00000506632 OR52D1Q9H346 318 aa7.72□□□□□ -1.17
PDLIM5-209ENST00000506632 ELOVL3Q9HB03 270 aa7.72□□□□□ -1.17
PDLIM5-209ENST00000506632 TBCCD1Q9NVR7 557 aa7.72□□□□□ -1.17
PDLIM5-209ENST00000506632 ATPIF1Q9UII2 106 aa7.72□□□□□ -1.17
PDLIM5-209ENST00000506632 COA3Q9Y2R0 106 aaPredicted RBP7.72□□□□□ -1.17
PDLIM5-209ENST00000506632 IGLV1-36A0A0B4J1U3 117 aa7.71□□□□□ -1.18
PDLIM5-209ENST00000506632 IGHV1-69-2A0A0G2JMI3 117 aa7.71□□□□□ -1.18
PDLIM5-209ENST00000506632 B4DSR2 109 aa7.71□□□□□ -1.18
PDLIM5-209ENST00000506632 FAM157AC9JC47 383 aa7.71□□□□□ -1.18
PDLIM5-209ENST00000506632 PPIHO43447 177 aaKnown RBP7.71□□□□□ -1.18
PDLIM5-209ENST00000506632 DOK2O60496 412 aa7.71□□□□□ -1.18
PDLIM5-209ENST00000506632 MPZL1O95297 269 aa7.71□□□□□ -1.18
PDLIM5-209ENST00000506632 PPP1R3DO95685 299 aa7.71□□□□□ -1.18
PDLIM5-209ENST00000506632 ABHD16AO95870 558 aa7.71□□□□□ -1.18
PDLIM5-209ENST00000506632 MT-ND5P03915 603 aa7.71□□□□□ -1.18
PDLIM5-209ENST00000506632 CD55P08174 381 aa7.71□□□□□ -1.18
PDLIM5-209ENST00000506632 SRD5A1P18405 259 aa7.71□□□□□ -1.18
PDLIM5-209ENST00000506632 HNF1AP20823 631 aa7.71□□□□□ -1.18
PDLIM5-209ENST00000506632 ATP6V1B2P21281 511 aa7.71□□□□□ -1.18
PDLIM5-209ENST00000506632 TUBG1P23258 451 aa7.71□□□□□ -1.18
PDLIM5-209ENST00000506632 CRABP1P29762 137 aa7.71□□□□□ -1.18
PDLIM5-209ENST00000506632 RRM2P31350 389 aa7.71□□□□□ -1.18
PDLIM5-209ENST00000506632 LIPAP38571 399 aa7.71□□□□□ -1.18
PDLIM5-209ENST00000506632 MAGEA2P43356 314 aa7.71□□□□□ -1.18
PDLIM5-209ENST00000506632 HTR5AP47898 357 aa7.71□□□□□ -1.18
PDLIM5-209ENST00000506632 ZNF81P51508 661 aa7.71□□□□□ -1.18
PDLIM5-209ENST00000506632 DVL1P1P54792 670 aaPredicted RBP7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms