RNA–Protein interactions for RNA: ENST00000506018.5

NR1I3-222, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 1,380 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-222ENST00000506018 RIN1Q13671 783 aa8.94□□□□□ -0.98
NR1I3-222ENST00000506018 MAD2L1BPQ15013 274 aaPredicted RBP8.94□□□□□ -0.98
NR1I3-222ENST00000506018 SNCBQ16143 134 aa8.94□□□□□ -0.98
NR1I3-222ENST00000506018 ZNF718Q3SXZ3 478 aa8.94□□□□□ -0.98
NR1I3-222ENST00000506018 PABPC1L2AQ5JQF8 200 aa8.94□□□□□ -0.98
NR1I3-222ENST00000506018 FAM27BQ5VT28 67 aa8.94□□□□□ -0.98
NR1I3-222ENST00000506018 MBOAT2Q6ZWT7 520 aa8.94□□□□□ -0.98
NR1I3-222ENST00000506018 ZDHHC13Q8IUH4 622 aa8.94□□□□□ -0.98
NR1I3-222ENST00000506018 CPEB3Q8NE35 698 aaKnown RBP8.94□□□□□ -0.98
NR1I3-222ENST00000506018 OR1J1Q8NGS3 322 aa8.94□□□□□ -0.98
NR1I3-222ENST00000506018 OR51A7Q8NH64 312 aa8.94□□□□□ -0.98
NR1I3-222ENST00000506018 LRTOMTQ8WZ04 291 aa8.94□□□□□ -0.98
NR1I3-222ENST00000506018 HDAC2Q92769 488 aaKnown RBP8.94□□□□□ -0.98
NR1I3-222ENST00000506018 NRBF2Q96F24 287 aa8.94□□□□□ -0.98
NR1I3-222ENST00000506018 C9orf16Q9BUW7 83 aa8.94□□□□□ -0.98
NR1I3-222ENST00000506018 ELOVL3Q9HB03 270 aa8.94□□□□□ -0.98
NR1I3-222ENST00000506018 HINT3Q9NQE9 182 aaKnown RBP8.94□□□□□ -0.98
NR1I3-222ENST00000506018 DECR2Q9NUI1 292 aa8.94□□□□□ -0.98
NR1I3-222ENST00000506018 RHCGQ9UBD6 479 aa8.94□□□□□ -0.98
NR1I3-222ENST00000506018 TIMM10BQ9Y5J6 103 aa8.94□□□□□ -0.98
NR1I3-222ENST00000506018 IGLV3-9A0A075B6K5 115 aa8.93□□□□□ -0.98
NR1I3-222ENST00000506018 TRAV27A0A087WT01 109 aa8.93□□□□□ -0.98
NR1I3-222ENST00000506018 A0A1W2PPL8 197 aa8.93□□□□□ -0.98
NR1I3-222ENST00000506018 PLSCR5A0PG75 271 aa8.93□□□□□ -0.98
NR1I3-222ENST00000506018 C5orf49A4QMS7 147 aa8.93□□□□□ -0.98
NR1I3-222ENST00000506018 C12orf71A8MTZ7 269 aa8.93□□□□□ -0.98
NR1I3-222ENST00000506018 C17orf100A8MU93 164 aa8.93□□□□□ -0.98
NR1I3-222ENST00000506018 B4DSR2 109 aa8.93□□□□□ -0.98
NR1I3-222ENST00000506018 TNFRSF11BO00300 401 aa8.93□□□□□ -0.98
NR1I3-222ENST00000506018 AHCYL1O43865 530 aa8.93□□□□□ -0.98
NR1I3-222ENST00000506018 LILRA1O75019 489 aa8.93□□□□□ -0.98
NR1I3-222ENST00000506018 TFP02787 698 aa8.93□□□□□ -0.98
NR1I3-222ENST00000506018 CST2P09228 141 aa8.93□□□□□ -0.98
NR1I3-222ENST00000506018 MMP7P09237 267 aaPredicted RBP8.93□□□□□ -0.98
NR1I3-222ENST00000506018 ZNF32P17041 273 aa8.93□□□□□ -0.98
NR1I3-222ENST00000506018 MAKP20794 623 aa8.93□□□□□ -0.98
NR1I3-222ENST00000506018 MSR1P21757 451 aa8.93□□□□□ -0.98
NR1I3-222ENST00000506018 CDAP32320 146 aa8.93□□□□□ -0.98
NR1I3-222ENST00000506018 SRP14P37108 136 aaKnown RBP8.93□□□□□ -0.98
NR1I3-222ENST00000506018 LIPAP38571 399 aa8.93□□□□□ -0.98
NR1I3-222ENST00000506018 FMODQ06828 376 aa8.93□□□□□ -0.98
NR1I3-222ENST00000506018 SCGB2A2Q13296 93 aa8.93□□□□□ -0.98
NR1I3-222ENST00000506018 ZMAT1Q5H9K5 638 aa8.93□□□□□ -0.98
NR1I3-222ENST00000506018 FAM209AQ5JX71 171 aa8.93□□□□□ -0.98
NR1I3-222ENST00000506018 ELFN2Q5R3F8 820 aa8.93□□□□□ -0.98
NR1I3-222ENST00000506018 SLC25A47Q6Q0C1 308 aa8.93□□□□□ -0.98
NR1I3-222ENST00000506018 LRP11Q86VZ4 500 aa8.93□□□□□ -0.98
NR1I3-222ENST00000506018 ARIH2OSQ8N7S6 290 aa8.93□□□□□ -0.98
NR1I3-222ENST00000506018 EME1Q96AY2 570 aa8.93□□□□□ -0.98
NR1I3-222ENST00000506018 CYSLTR2Q9NS75 346 aa8.93□□□□□ -0.98
NR1I3-222ENST00000506018 CGGBP1Q9UFW8 167 aaPredicted RBP8.93□□□□□ -0.98
NR1I3-222ENST00000506018 TMEFF2Q9UIK5 374 aaPredicted RBP8.93□□□□□ -0.98
NR1I3-222ENST00000506018 SAMHD1Q9Y3Z3 626 aaKnown RBP8.93□□□□□ -0.98
NR1I3-222ENST00000506018 A0A1W2PRQ8 180 aa8.92□□□□□ -0.98
NR1I3-222ENST00000506018 LYNX1G3V0Z9 82 aa8.92□□□□□ -0.98
NR1I3-222ENST00000506018 G3V2T6 193 aa8.92□□□□□ -0.98
NR1I3-222ENST00000506018 H3BSA7 217 aa8.92□□□□□ -0.98
NR1I3-222ENST00000506018 J3KTA2 159 aa8.92□□□□□ -0.98
NR1I3-222ENST00000506018 PHF1O43189 567 aaPredicted RBP8.92□□□□□ -0.98
NR1I3-222ENST00000506018 PPIHO43447 177 aaKnown RBP8.92□□□□□ -0.98
NR1I3-222ENST00000506018 HPXP02790 462 aa8.92□□□□□ -0.98
NR1I3-222ENST00000506018 LYNX1P0DP58 116 aa8.92□□□□□ -0.98
NR1I3-222ENST00000506018 HMGA2P52926 109 aa8.92□□□□□ -0.98
NR1I3-222ENST00000506018 CDH15P55291 814 aa8.92□□□□□ -0.98
NR1I3-222ENST00000506018 ERVK-25P63136 954 aa8.92□□□□□ -0.98
NR1I3-222ENST00000506018 DGCR6Q14129 220 aa8.92□□□□□ -0.98
NR1I3-222ENST00000506018 TRIP10Q15642 601 aa8.92□□□□□ -0.98
NR1I3-222ENST00000506018 MSMPQ1L6U9 139 aa8.92□□□□□ -0.98
NR1I3-222ENST00000506018 CR1LQ2VPA4 569 aa8.92□□□□□ -0.98
NR1I3-222ENST00000506018 ALKBH6Q3KRA9 238 aa8.92□□□□□ -0.98
NR1I3-222ENST00000506018 ZBED5Q49AG3 693 aa8.92□□□□□ -0.98
NR1I3-222ENST00000506018 LIPNQ5VXI9 398 aa8.92□□□□□ -0.98
NR1I3-222ENST00000506018 LIAT1Q6ZQX7 453 aa8.92□□□□□ -0.98
NR1I3-222ENST00000506018 TMPRSS11FQ6ZWK6 438 aa8.92□□□□□ -0.98
NR1I3-222ENST00000506018 ZER1Q7Z7L7 766 aa8.92□□□□□ -0.98
NR1I3-222ENST00000506018 AMIGO2Q86SJ2 522 aa8.92□□□□□ -0.98
NR1I3-222ENST00000506018 SYT9Q86SS6 491 aa8.92□□□□□ -0.98
NR1I3-222ENST00000506018 IGFN1Q86VF2 1251 aa8.92□□□□□ -0.98
NR1I3-222ENST00000506018 GLCCI1Q86VQ1 547 aa8.92□□□□□ -0.98
NR1I3-222ENST00000506018 PAQR4Q8N4S7 273 aaPredicted RBP8.92□□□□□ -0.98
NR1I3-222ENST00000506018 TEX29Q8N6K0 151 aa8.92□□□□□ -0.98
NR1I3-222ENST00000506018 OR13C2Q8NGS9 318 aa8.92□□□□□ -0.98
NR1I3-222ENST00000506018 OR5K1Q8NHB7 308 aa8.92□□□□□ -0.98
NR1I3-222ENST00000506018 NABP1Q96AH0 204 aa8.92□□□□□ -0.98
NR1I3-222ENST00000506018 TIMD4Q96H15 378 aa8.92□□□□□ -0.98
NR1I3-222ENST00000506018 ZNF570Q96NI8 536 aa8.92□□□□□ -0.98
NR1I3-222ENST00000506018 TSPAN32Q96QS1 320 aa8.92□□□□□ -0.98
NR1I3-222ENST00000506018 PKP2Q99959 881 aa8.92□□□□□ -0.98
NR1I3-222ENST00000506018 ZNF556Q9HAH1 456 aa8.92□□□□□ -0.98
NR1I3-222ENST00000506018 NMNAT1Q9HAN9 279 aaPredicted RBP8.92□□□□□ -0.98
NR1I3-222ENST00000506018 MAN2C1Q9NTJ4 1040 aa8.92□□□□□ -0.98
NR1I3-222ENST00000506018 NKIRAS2Q9NYR9 191 aa8.92□□□□□ -0.98
NR1I3-222ENST00000506018 MYEF2Q9P2K5 600 aaKnown RBP8.92□□□□□ -0.98
NR1I3-222ENST00000506018 NDRG4Q9ULP0 352 aaKnown RBP8.92□□□□□ -0.98
NR1I3-222ENST00000506018 UGT2A1Q9Y4X1 527 aa8.92□□□□□ -0.98
NR1I3-222ENST00000506018 ORC6Q9Y5N6 252 aa8.92□□□□□ -0.98
NR1I3-222ENST00000506018 MXRA5Q9NR99 2828 aa8.91□□□□□ -0.98
NR1I3-222ENST00000506018 A0A087WUU8 490 aa8.91□□□□□ -0.98
NR1I3-222ENST00000506018 FFAR1O14842 300 aa8.91□□□□□ -0.98
NR1I3-222ENST00000506018 DIRAS1O95057 198 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms