RNA–Protein interactions for RNA: ENST00000504807.5

DDX41-204, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 794 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-204ENST00000504807 NKIRAS2Q9NYR9 191 aa11.13□□□□□ -0.63
DDX41-204ENST00000504807 METRNQ9UJH8 293 aa11.13□□□□□ -0.63
DDX41-204ENST00000504807 WIPI2Q9Y4P8 454 aa11.13□□□□□ -0.63
DDX41-204ENST00000504807 CMYA5Q8N3K9 4069 aa11.12□□□□□ -0.63
DDX41-204ENST00000504807 A0A1W2PRQ8 180 aa11.12□□□□□ -0.63
DDX41-204ENST00000504807 PRSS37A4D1T9 235 aa11.12□□□□□ -0.63
DDX41-204ENST00000504807 B4DSR2 109 aa11.12□□□□□ -0.63
DDX41-204ENST00000504807 ENTPD5O75356 428 aa11.12□□□□□ -0.63
DDX41-204ENST00000504807 ALX3O95076 343 aa11.12□□□□□ -0.63
DDX41-204ENST00000504807 PTHP01270 115 aa11.12□□□□□ -0.63
DDX41-204ENST00000504807 DBHP09172 617 aa11.12□□□□□ -0.63
DDX41-204ENST00000504807 RPL4P36578 427 aaKnown RBP11.12□□□□□ -0.63
DDX41-204ENST00000504807 CDKN2AP42771 156 aaKnown RBP11.12□□□□□ -0.63
DDX41-204ENST00000504807 PSG7Q13046 419 aa11.12□□□□□ -0.63
DDX41-204ENST00000504807 KRR1Q13601 381 aaKnown RBP11.12□□□□□ -0.63
DDX41-204ENST00000504807 DGCR6Q14129 220 aa11.12□□□□□ -0.63
DDX41-204ENST00000504807 MEP1BQ16820 701 aa11.12□□□□□ -0.63
DDX41-204ENST00000504807 CCDC92Q53HC0 331 aaPredicted RBP11.12□□□□□ -0.63
DDX41-204ENST00000504807 AWAT1Q58HT5 328 aa11.12□□□□□ -0.63
DDX41-204ENST00000504807 GLYATQ6IB77 296 aa11.12□□□□□ -0.63
DDX41-204ENST00000504807 TMEM154Q6P9G4 183 aa11.12□□□□□ -0.63
DDX41-204ENST00000504807 VASH1Q7L8A9 365 aaPredicted RBP11.12□□□□□ -0.63
DDX41-204ENST00000504807 RNF113BQ8IZP6 322 aaKnown RBP11.12□□□□□ -0.63
DDX41-204ENST00000504807 OR52J3Q8NH60 311 aa11.12□□□□□ -0.63
DDX41-204ENST00000504807 LRRC37BQ96QE4 947 aa11.12□□□□□ -0.63
DDX41-204ENST00000504807 RBP7Q96R05 134 aa11.12□□□□□ -0.63
DDX41-204ENST00000504807 FAM107BQ9H098 131 aa11.12□□□□□ -0.63
DDX41-204ENST00000504807 SYT4Q9H2B2 425 aa11.12□□□□□ -0.63
DDX41-204ENST00000504807 ZNF665Q9H7R5 613 aa11.12□□□□□ -0.63
DDX41-204ENST00000504807 MED4Q9NPJ6 270 aa11.12□□□□□ -0.63
DDX41-204ENST00000504807 NRIP3Q9NQ35 241 aa11.12□□□□□ -0.63
DDX41-204ENST00000504807 DCAF13Q9NV06 445 aaKnown RBP11.12□□□□□ -0.63
DDX41-204ENST00000504807 SLCO1C1Q9NYB5 712 aa11.12□□□□□ -0.63
DDX41-204ENST00000504807 STX18Q9P2W9 335 aaKnown RBP11.12□□□□□ -0.63
DDX41-204ENST00000504807 COA3Q9Y2R0 106 aaPredicted RBP11.12□□□□□ -0.63
DDX41-204ENST00000504807 TIMM10BQ9Y5J6 103 aa11.12□□□□□ -0.63
DDX41-204ENST00000504807 TANC2Q9HCD6 1990 aa11.11□□□□□ -0.63
DDX41-204ENST00000504807 A0A0A6YYJ9 748 aa11.11□□□□□ -0.63
DDX41-204ENST00000504807 HTR3EA5X5Y0 456 aa11.11□□□□□ -0.63
DDX41-204ENST00000504807 A6NIZ1 184 aa11.11□□□□□ -0.63
DDX41-204ENST00000504807 SOCS2O14508 198 aa11.11□□□□□ -0.63
DDX41-204ENST00000504807 PLPP2O43688 288 aa11.11□□□□□ -0.63
DDX41-204ENST00000504807 SLC16A7O60669 478 aa11.11□□□□□ -0.63
DDX41-204ENST00000504807 IGHV2-5P01817 119 aa11.11□□□□□ -0.63
DDX41-204ENST00000504807 H1F0P07305 194 aaKnown RBP11.11□□□□□ -0.63
DDX41-204ENST00000504807 RAP1BP61224 184 aa11.11□□□□□ -0.63
DDX41-204ENST00000504807 RAP1AP62834 184 aa11.11□□□□□ -0.63
DDX41-204ENST00000504807 RSPO1Q2MKA7 263 aaPredicted RBP11.11□□□□□ -0.63
DDX41-204ENST00000504807 PCGF3Q3KNV8 242 aa11.11□□□□□ -0.63
DDX41-204ENST00000504807 FGD3Q5JSP0 725 aa11.11□□□□□ -0.63
DDX41-204ENST00000504807 FAM205BPQ63HN1 556 aa11.11□□□□□ -0.63
DDX41-204ENST00000504807 GLCCI1Q86VQ1 547 aa11.11□□□□□ -0.63
DDX41-204ENST00000504807 SNX33Q8WV41 574 aa11.11□□□□□ -0.63
DDX41-204ENST00000504807 RSRC1Q96IZ7 334 aaKnown RBP11.11□□□□□ -0.63
DDX41-204ENST00000504807 C4orf45Q96LM5 186 aa11.11□□□□□ -0.63
DDX41-204ENST00000504807 ZNF570Q96NI8 536 aa11.11□□□□□ -0.63
DDX41-204ENST00000504807 GPX7Q96SL4 187 aaPredicted RBP11.11□□□□□ -0.63
DDX41-204ENST00000504807 NUAK2Q9H093 628 aa11.11□□□□□ -0.63
DDX41-204ENST00000504807 SAP30LQ9HAJ7 183 aa11.11□□□□□ -0.63
DDX41-204ENST00000504807 ARL8BQ9NVJ2 186 aa11.11□□□□□ -0.63
DDX41-204ENST00000504807 VSX1Q9NZR4 365 aaPredicted RBP11.11□□□□□ -0.63
DDX41-204ENST00000504807 AP3M1Q9Y2T2 418 aa11.11□□□□□ -0.63
DDX41-204ENST00000504807 STARD10Q9Y365 291 aa11.11□□□□□ -0.63
DDX41-204ENST00000504807 IER3IP1Q9Y5U9 82 aa11.11□□□□□ -0.63
DDX41-204ENST00000504807 LOC105371242A0A075B767 164 aa11.1□□□□□ -0.63
DDX41-204ENST00000504807 OR6C6A6NF89 314 aa11.1□□□□□ -0.63
DDX41-204ENST00000504807 RER1O15258 196 aa11.1□□□□□ -0.63
DDX41-204ENST00000504807 SNX3O60493 162 aa11.1□□□□□ -0.63
DDX41-204ENST00000504807 DOK2O60496 412 aa11.1□□□□□ -0.63
DDX41-204ENST00000504807 NDUFB2O95178 105 aa11.1□□□□□ -0.63
DDX41-204ENST00000504807 TFP02787 698 aa11.1□□□□□ -0.63
DDX41-204ENST00000504807 PSKH1P11801 424 aa11.1□□□□□ -0.63
DDX41-204ENST00000504807 SDHAP31040 664 aa11.1□□□□□ -0.63
DDX41-204ENST00000504807 PRSS12P56730 875 aa11.1□□□□□ -0.63
DDX41-204ENST00000504807 ZNF718Q3SXZ3 478 aa11.1□□□□□ -0.63
DDX41-204ENST00000504807 ZER1Q7Z7L7 766 aa11.1□□□□□ -0.63
DDX41-204ENST00000504807 PEG10Q86TG7 708 aaKnown RBP11.1□□□□□ -0.63
DDX41-204ENST00000504807 FAM216AQ8WUB2 273 aa11.1□□□□□ -0.63
DDX41-204ENST00000504807 TMPRSS13Q9BYE2 586 aa11.1□□□□□ -0.63
DDX41-204ENST00000504807 LRMDAQ9H2I8 198 aa11.1□□□□□ -0.63
DDX41-204ENST00000504807 KCNN2Q9H2S1 579 aa11.1□□□□□ -0.63
DDX41-204ENST00000504807 ANKRD19PQ9H560 264 aa11.1□□□□□ -0.63
DDX41-204ENST00000504807 RERGLQ9H628 205 aa11.1□□□□□ -0.63
DDX41-204ENST00000504807 METTL17Q9H7H0 456 aaPredicted RBP11.1□□□□□ -0.63
DDX41-204ENST00000504807 SPAG4Q9NPE6 437 aa11.1□□□□□ -0.63
DDX41-204ENST00000504807 ASH2LQ9UBL3 628 aa11.1□□□□□ -0.63
DDX41-204ENST00000504807 GRHPRQ9UBQ7 328 aa11.1□□□□□ -0.63
DDX41-204ENST00000504807 CD300AQ9UGN4 299 aa11.1□□□□□ -0.63
DDX41-204ENST00000504807 IGLV1-36A0A0B4J1U3 117 aa11.09□□□□□ -0.63
DDX41-204ENST00000504807 C12orf71A8MTZ7 269 aa11.09□□□□□ -0.63
DDX41-204ENST00000504807 SGCEO43556 437 aa11.09□□□□□ -0.63
DDX41-204ENST00000504807 PPP1R3DO95685 299 aa11.09□□□□□ -0.63
DDX41-204ENST00000504807 TXNDC12O95881 172 aa11.09□□□□□ -0.63
DDX41-204ENST00000504807 ADH4P08319 380 aa11.09□□□□□ -0.63
DDX41-204ENST00000504807 RHCEP18577 417 aa11.09□□□□□ -0.63
DDX41-204ENST00000504807 ADRA2CP18825 462 aa11.09□□□□□ -0.63
DDX41-204ENST00000504807 ZFP36P26651 326 aaKnown RBP11.09□□□□□ -0.63
DDX41-204ENST00000504807 GCH1P30793 250 aa11.09□□□□□ -0.63
DDX41-204ENST00000504807 HTR5AP47898 357 aa11.09□□□□□ -0.63
DDX41-204ENST00000504807 SELENOVP59797 346 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms