RNA–Protein interactions for RNA: ENST00000504554.1

RFC1-207, Transcript of replication factor C subunit 1, humanhuman

TSL 4

Gene RFC1, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-207ENST00000504554 POLE4Q9NR33 117 aa6.86□□□□□ -1.31
RFC1-207ENST00000504554 NDE1Q9NXR1 346 aa6.86□□□□□ -1.31
RFC1-207ENST00000504554 VSX1Q9NZR4 365 aaPredicted RBP6.86□□□□□ -1.31
RFC1-207ENST00000504554 GRHPRQ9UBQ7 328 aa6.86□□□□□ -1.31
RFC1-207ENST00000504554 CMAHPQ9Y471 501 aa6.86□□□□□ -1.31
RFC1-207ENST00000504554 IGHV4-61A0A0C4DH41 118 aa6.85□□□□□ -1.31
RFC1-207ENST00000504554 ANKRD34BA5PLL1 514 aa6.85□□□□□ -1.31
RFC1-207ENST00000504554 A6NIZ1 184 aa6.85□□□□□ -1.31
RFC1-207ENST00000504554 SOCS2O14508 198 aa6.85□□□□□ -1.31
RFC1-207ENST00000504554 PAX4O43316 350 aa6.85□□□□□ -1.31
RFC1-207ENST00000504554 OR10H3O60404 316 aa6.85□□□□□ -1.31
RFC1-207ENST00000504554 SLC16A7O60669 478 aa6.85□□□□□ -1.31
RFC1-207ENST00000504554 NCR1O76036 304 aa6.85□□□□□ -1.31
RFC1-207ENST00000504554 STAMBPO95630 424 aa6.85□□□□□ -1.31
RFC1-207ENST00000504554 SNAP29O95721 258 aa6.85□□□□□ -1.31
RFC1-207ENST00000504554 NGFP01138 241 aa6.85□□□□□ -1.31
RFC1-207ENST00000504554 GASTP01350 101 aa6.85□□□□□ -1.31
RFC1-207ENST00000504554 HPXP02790 462 aa6.85□□□□□ -1.31
RFC1-207ENST00000504554 TP53P04637 393 aaPredicted RBP6.85□□□□□ -1.31
RFC1-207ENST00000504554 NAT2P11245 290 aa6.85□□□□□ -1.31
RFC1-207ENST00000504554 HIST1H1CP16403 213 aaKnown RBP6.85□□□□□ -1.31
RFC1-207ENST00000504554 FPR3P25089 353 aa6.85□□□□□ -1.31
RFC1-207ENST00000504554 SDHAP31040 664 aa6.85□□□□□ -1.31
RFC1-207ENST00000504554 RBMXP38159 391 aaKnown RBP6.85□□□□□ -1.31
RFC1-207ENST00000504554 MPV17P39210 176 aa6.85□□□□□ -1.31
RFC1-207ENST00000504554 MNAT1P51948 309 aa6.85□□□□□ -1.31
RFC1-207ENST00000504554 HMGA2P52926 109 aa6.85□□□□□ -1.31
RFC1-207ENST00000504554 GP2P55259 537 aaKnown RBP6.85□□□□□ -1.31
RFC1-207ENST00000504554 UCP2P55851 309 aa6.85□□□□□ -1.31
RFC1-207ENST00000504554 RAP1BP61224 184 aa6.85□□□□□ -1.31
RFC1-207ENST00000504554 RAP1AP62834 184 aa6.85□□□□□ -1.31
RFC1-207ENST00000504554 HSF2Q03933 536 aa6.85□□□□□ -1.31
RFC1-207ENST00000504554 MEP1BQ16820 701 aa6.85□□□□□ -1.31
RFC1-207ENST00000504554 FAM205BPQ63HN1 556 aa6.85□□□□□ -1.31
RFC1-207ENST00000504554 C1orf94Q6P1W5 598 aa6.85□□□□□ -1.31
RFC1-207ENST00000504554 PGM2L1Q6PCE3 622 aa6.85□□□□□ -1.31
RFC1-207ENST00000504554 SMARCD3Q6STE5 483 aa6.85□□□□□ -1.31
RFC1-207ENST00000504554 DPY19L2P2Q6ZN68 376 aa6.85□□□□□ -1.31
RFC1-207ENST00000504554 RFPL4BQ6ZWI9 263 aa6.85□□□□□ -1.31
RFC1-207ENST00000504554 TRPM8Q7Z2W7 1104 aa6.85□□□□□ -1.31
RFC1-207ENST00000504554 PRIMA1Q86XR5 153 aa6.85□□□□□ -1.31
RFC1-207ENST00000504554 OR8D4Q8NGM9 314 aa6.85□□□□□ -1.31
RFC1-207ENST00000504554 FANK1Q8TC84 345 aa6.85□□□□□ -1.31
RFC1-207ENST00000504554 BCAS4Q8TDM0 211 aa6.85□□□□□ -1.31
RFC1-207ENST00000504554 FBLIM1Q8WUP2 373 aa6.85□□□□□ -1.31
RFC1-207ENST00000504554 ZNRF4Q8WWF5 429 aa6.85□□□□□ -1.31
RFC1-207ENST00000504554 C11orf40Q8WZ69 217 aa6.85□□□□□ -1.31
RFC1-207ENST00000504554 FAM168AQ92567 244 aa6.85□□□□□ -1.31
RFC1-207ENST00000504554 MCUR1Q96AQ8 359 aa6.85□□□□□ -1.31
RFC1-207ENST00000504554 CCDC124Q96CT7 223 aaKnown RBP6.85□□□□□ -1.31
RFC1-207ENST00000504554 SOX7Q9BT81 388 aa6.85□□□□□ -1.31
RFC1-207ENST00000504554 THTPAQ9BU02 230 aa6.85□□□□□ -1.31
RFC1-207ENST00000504554 PLA2G12AQ9BZM1 189 aa6.85□□□□□ -1.31
RFC1-207ENST00000504554 NUAK2Q9H093 628 aa6.85□□□□□ -1.31
RFC1-207ENST00000504554 EGLN3Q9H6Z9 239 aa6.85□□□□□ -1.31
RFC1-207ENST00000504554 CCNB1IP1Q9NPC3 277 aa6.85□□□□□ -1.31
RFC1-207ENST00000504554 STX18Q9P2W9 335 aaKnown RBP6.85□□□□□ -1.31
RFC1-207ENST00000504554 SLC7A8Q9UHI5 535 aa6.85□□□□□ -1.31
RFC1-207ENST00000504554 AURKCQ9UQB9 309 aa6.85□□□□□ -1.31
RFC1-207ENST00000504554 COA3Q9Y2R0 106 aaPredicted RBP6.85□□□□□ -1.31
RFC1-207ENST00000504554 CSPG4Q6UVK1 2322 aa6.85□□□□□ -1.31
RFC1-207ENST00000504554 ARFGEF3Q5TH69 2177 aa6.84□□□□□ -1.31
RFC1-207ENST00000504554 IGLV3-9A0A075B6K5 115 aa6.84□□□□□ -1.31
RFC1-207ENST00000504554 IGLV1-36A0A0B4J1U3 117 aa6.84□□□□□ -1.31
RFC1-207ENST00000504554 C5orf49A4QMS7 147 aa6.84□□□□□ -1.31
RFC1-207ENST00000504554 FAM171A2A8MVW0 826 aa6.84□□□□□ -1.31
RFC1-207ENST00000504554 TNFRSF11BO00300 401 aa6.84□□□□□ -1.31
RFC1-207ENST00000504554 IGHV4-31P0DP07 118 aa6.84□□□□□ -1.31
RFC1-207ENST00000504554 GAAP10253 952 aa6.84□□□□□ -1.31
RFC1-207ENST00000504554 PSKH1P11801 424 aa6.84□□□□□ -1.31
RFC1-207ENST00000504554 ZNF250P15622 560 aa6.84□□□□□ -1.31
RFC1-207ENST00000504554 MSR1P21757 451 aa6.84□□□□□ -1.31
RFC1-207ENST00000504554 CCNOP22674 350 aa6.84□□□□□ -1.31
RFC1-207ENST00000504554 COL8A2P25067 703 aa6.84□□□□□ -1.31
RFC1-207ENST00000504554 STOMP27105 288 aa6.84□□□□□ -1.31
RFC1-207ENST00000504554 IL2RGP31785 369 aa6.84□□□□□ -1.31
RFC1-207ENST00000504554 APLNRP35414 380 aa6.84□□□□□ -1.31
RFC1-207ENST00000504554 NR4A2P43354 598 aa6.84□□□□□ -1.31
RFC1-207ENST00000504554 MAGEB1P43366 347 aa6.84□□□□□ -1.31
RFC1-207ENST00000504554 EVX1P49640 407 aa6.84□□□□□ -1.31
RFC1-207ENST00000504554 PDLIM4P50479 330 aa6.84□□□□□ -1.31
RFC1-207ENST00000504554 SMIM11AP58511 58 aa6.84□□□□□ -1.31
RFC1-207ENST00000504554 DSCR9P59020 149 aa6.84□□□□□ -1.31
RFC1-207ENST00000504554 GALK2Q01415 458 aa6.84□□□□□ -1.31
RFC1-207ENST00000504554 LOXL1Q08397 574 aaPredicted RBP6.84□□□□□ -1.31
RFC1-207ENST00000504554 TSPAN31Q12999 210 aa6.84□□□□□ -1.31
RFC1-207ENST00000504554 CARTPTQ16568 116 aa6.84□□□□□ -1.31
RFC1-207ENST00000504554 TBC1D28Q2M2D7 210 aa6.84□□□□□ -1.31
RFC1-207ENST00000504554 TMEM249Q2WGJ8 235 aa6.84□□□□□ -1.31
RFC1-207ENST00000504554 CCDC92Q53HC0 331 aaPredicted RBP6.84□□□□□ -1.31
RFC1-207ENST00000504554 SPRNQ5BIV9 151 aa6.84□□□□□ -1.31
RFC1-207ENST00000504554 CLEC12AQ5QGZ9 265 aa6.84□□□□□ -1.31
RFC1-207ENST00000504554 ELFN2Q5R3F8 820 aa6.84□□□□□ -1.31
RFC1-207ENST00000504554 ZNF362Q5T0B9 420 aaPredicted RBP6.84□□□□□ -1.31
RFC1-207ENST00000504554 SPATA46Q5T0L3 261 aa6.84□□□□□ -1.31
RFC1-207ENST00000504554 SLC35F1Q5T1Q4 408 aa6.84□□□□□ -1.31
RFC1-207ENST00000504554 GPR139Q6DWJ6 353 aa6.84□□□□□ -1.31
RFC1-207ENST00000504554 RGS7BPQ6MZT1 257 aaPredicted RBP6.84□□□□□ -1.31
RFC1-207ENST00000504554 ZNF620Q6ZNG0 422 aa6.84□□□□□ -1.31
RFC1-207ENST00000504554 DPPA2Q7Z7J5 298 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms