RNA–Protein interactions for RNA: ENST00000504387.5

NEDD9-208, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NEDD9, Length 3,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-208ENST00000504387 LILRA6Q6PI73 481 aa6.88□□□□□ -1.31
NEDD9-208ENST00000504387 USP53Q70EK8 1073 aa6.88□□□□□ -1.31
NEDD9-208ENST00000504387 TRAPPC6BQ86SZ2 158 aa6.88□□□□□ -1.31
NEDD9-208ENST00000504387 ZNF563Q8TA94 476 aa6.88□□□□□ -1.31
NEDD9-208ENST00000504387 GPR148Q8TDV2 347 aa6.88□□□□□ -1.31
NEDD9-208ENST00000504387 SLC25A43Q8WUT9 341 aaPredicted RBP6.88□□□□□ -1.31
NEDD9-208ENST00000504387 SLC41A2Q96JW4 573 aa6.88□□□□□ -1.31
NEDD9-208ENST00000504387 NRIP2Q9BQI9 281 aa6.88□□□□□ -1.31
NEDD9-208ENST00000504387 ZNF251Q9BRH9 671 aa6.88□□□□□ -1.31
NEDD9-208ENST00000504387 MENTQ9BUN1 341 aa6.88□□□□□ -1.31
NEDD9-208ENST00000504387 CENPMQ9NSP4 180 aa6.88□□□□□ -1.31
NEDD9-208ENST00000504387 WBP1LQ9NX94 342 aa6.88□□□□□ -1.31
NEDD9-208ENST00000504387 KLK13Q9UKR3 277 aa6.88□□□□□ -1.31
NEDD9-208ENST00000504387 MRPS18BQ9Y676 258 aaKnown RBP6.88□□□□□ -1.31
NEDD9-208ENST00000504387 TNFSF12-TNFSF13A0A0A6YY99 330 aa6.88□□□□□ -1.31
NEDD9-208ENST00000504387 TNFSF12O43508 249 aa6.88□□□□□ -1.31
NEDD9-208ENST00000504387 CDC40O60508 579 aaKnown RBP eCLIP6.88□□□□□ -1.31
NEDD9-208ENST00000504387 OR2F2O95006 317 aa6.88□□□□□ -1.31
NEDD9-208ENST00000504387 LYPD3O95274 346 aa6.88□□□□□ -1.31
NEDD9-208ENST00000504387 CSTAP01040 98 aa6.88□□□□□ -1.31
NEDD9-208ENST00000504387 KNG1P01042 644 aa6.88□□□□□ -1.31
NEDD9-208ENST00000504387 OR8U9P0C7N5 309 aa6.88□□□□□ -1.31
NEDD9-208ENST00000504387 SLC35G6P0C7Q6 338 aa6.88□□□□□ -1.31
NEDD9-208ENST00000504387 CALCBP10092 127 aa6.88□□□□□ -1.31
NEDD9-208ENST00000504387 TPT1P13693 172 aaKnown RBP6.88□□□□□ -1.31
NEDD9-208ENST00000504387 CD53P19397 219 aa6.88□□□□□ -1.31
NEDD9-208ENST00000504387 PEBP1P30086 187 aaKnown RBP6.88□□□□□ -1.31
NEDD9-208ENST00000504387 CD96P40200 585 aa6.88□□□□□ -1.31
NEDD9-208ENST00000504387 NDUFA6P56556 154 aa6.88□□□□□ -1.31
NEDD9-208ENST00000504387 TAS2R19P59542 299 aa6.88□□□□□ -1.31
NEDD9-208ENST00000504387 OR2F1Q13607 317 aa6.88□□□□□ -1.31
NEDD9-208ENST00000504387 MLC1Q15049 377 aa6.88□□□□□ -1.31
NEDD9-208ENST00000504387 OR2B11Q5JQS5 317 aa6.88□□□□□ -1.31
NEDD9-208ENST00000504387 C1QL3Q5VWW1 255 aa6.88□□□□□ -1.31
NEDD9-208ENST00000504387 DHRS7BQ6IAN0 325 aaPredicted RBP6.88□□□□□ -1.31
NEDD9-208ENST00000504387 UNQ9370/PRO34162Q6UXP9 181 aa6.88□□□□□ -1.31
NEDD9-208ENST00000504387 PRR22Q8IZ63 422 aa6.88□□□□□ -1.31
NEDD9-208ENST00000504387 SYS1Q8N2H4 156 aa6.88□□□□□ -1.31
NEDD9-208ENST00000504387 PRSS35Q8N3Z0 413 aa6.88□□□□□ -1.31
NEDD9-208ENST00000504387 WDSUB1Q8N9V3 476 aa6.88□□□□□ -1.31
NEDD9-208ENST00000504387 ZSCAN4Q8NAM6 433 aaPredicted RBP6.88□□□□□ -1.31
NEDD9-208ENST00000504387 APCDD1LQ8NCL9 501 aa6.88□□□□□ -1.31
NEDD9-208ENST00000504387 OR8U1Q8NH10 309 aa6.88□□□□□ -1.31
NEDD9-208ENST00000504387 RNF141Q8WVD5 230 aa6.88□□□□□ -1.31
NEDD9-208ENST00000504387 SUCNR1Q9BXA5 334 aa6.88□□□□□ -1.31
NEDD9-208ENST00000504387 RAB33BQ9H082 229 aa6.88□□□□□ -1.31
NEDD9-208ENST00000504387 SLC2A4RGQ9NR83 387 aa6.88□□□□□ -1.31
NEDD9-208ENST00000504387 UPB1Q9UBR1 384 aa6.88□□□□□ -1.31
NEDD9-208ENST00000504387 MTCL1Q9Y4B5 1905 aaKnown RBP6.88□□□□□ -1.31
NEDD9-208ENST00000504387 A0A0B4J2E0 115 aa6.88□□□□□ -1.31
NEDD9-208ENST00000504387 A0A1B0GX12 115 aa6.88□□□□□ -1.31
NEDD9-208ENST00000504387 H0YIZ8 118 aa6.88□□□□□ -1.31
NEDD9-208ENST00000504387 GPRIN2O60269 458 aa6.88□□□□□ -1.31
NEDD9-208ENST00000504387 UPK3AO75631 287 aa6.88□□□□□ -1.31
NEDD9-208ENST00000504387 STK17BO94768 372 aa6.88□□□□□ -1.31
NEDD9-208ENST00000504387 KAT7O95251 611 aa6.88□□□□□ -1.31
NEDD9-208ENST00000504387 IGKV1D-16P01601 117 aa6.88□□□□□ -1.31
NEDD9-208ENST00000504387 CXCL10P02778 98 aa6.88□□□□□ -1.31
NEDD9-208ENST00000504387 TACSTD2P09758 323 aa6.88□□□□□ -1.31
NEDD9-208ENST00000504387 GDI1P31150 447 aa6.88□□□□□ -1.31
NEDD9-208ENST00000504387 RPS10P46783 165 aaKnown RBP6.88□□□□□ -1.31
NEDD9-208ENST00000504387 FHL1Q13642 323 aa6.88□□□□□ -1.31
NEDD9-208ENST00000504387 ITPRIPL2Q3MIP1 535 aa6.88□□□□□ -1.31
NEDD9-208ENST00000504387 PAPD4Q6PIY7 484 aaKnown RBP6.88□□□□□ -1.31
NEDD9-208ENST00000504387 DHRS11Q6UWP2 260 aa6.88□□□□□ -1.31
NEDD9-208ENST00000504387 VN1R4Q7Z5H5 301 aa6.88□□□□□ -1.31
NEDD9-208ENST00000504387 LINC00346Q8IVM7 164 aa6.88□□□□□ -1.31
NEDD9-208ENST00000504387 RNF113BQ8IZP6 322 aaKnown RBP6.88□□□□□ -1.31
NEDD9-208ENST00000504387 POMGNT2Q8NAT1 580 aa6.88□□□□□ -1.31
NEDD9-208ENST00000504387 ZNF784Q8NCA9 323 aaPredicted RBP6.88□□□□□ -1.31
NEDD9-208ENST00000504387 NAXEQ8NCW5 288 aa6.88□□□□□ -1.31
NEDD9-208ENST00000504387 SLC25A44Q96H78 314 aaPredicted RBP6.88□□□□□ -1.31
NEDD9-208ENST00000504387 PHB2Q99623 299 aa6.88□□□□□ -1.31
NEDD9-208ENST00000504387 PCBD2Q9H0N5 130 aa6.88□□□□□ -1.31
NEDD9-208ENST00000504387 TAS2R8Q9NYW2 309 aa6.88□□□□□ -1.31
NEDD9-208ENST00000504387 GPR34Q9UPC5 381 aa6.88□□□□□ -1.31
NEDD9-208ENST00000504387 RCL1Q9Y2P8 373 aaKnown RBP6.88□□□□□ -1.31
NEDD9-208ENST00000504387 KCNK7Q9Y2U2 307 aa6.88□□□□□ -1.31
NEDD9-208ENST00000504387 FBXO7Q9Y3I1 522 aa6.88□□□□□ -1.31
NEDD9-208ENST00000504387 PUS1Q9Y606 427 aaKnown RBP eCLIP6.88□□□□□ -1.31
NEDD9-208ENST00000504387 COL4A6Q14031 1691 aa6.87□□□□□ -1.31
NEDD9-208ENST00000504387 PQLC2LA1A4F0 135 aa6.87□□□□□ -1.31
NEDD9-208ENST00000504387 CDC14CA4D256 554 aa6.87□□□□□ -1.31
NEDD9-208ENST00000504387 SRPX2O60687 465 aaPredicted RBP6.87□□□□□ -1.31
NEDD9-208ENST00000504387 TBX19O60806 448 aa6.87□□□□□ -1.31
NEDD9-208ENST00000504387 CTSVO60911 334 aa6.87□□□□□ -1.31
NEDD9-208ENST00000504387 RNGTTO60942 597 aaKnown RBP6.87□□□□□ -1.31
NEDD9-208ENST00000504387 APBB3O95704 486 aa6.87□□□□□ -1.31
NEDD9-208ENST00000504387 HPGDP15428 266 aa6.87□□□□□ -1.31
NEDD9-208ENST00000504387 PSMB6P28072 239 aa6.87□□□□□ -1.31
NEDD9-208ENST00000504387 GRK6P43250 576 aa6.87□□□□□ -1.31
NEDD9-208ENST00000504387 CST6Q15828 149 aa6.87□□□□□ -1.31
NEDD9-208ENST00000504387 SGCAQ16586 387 aa6.87□□□□□ -1.31
NEDD9-208ENST00000504387 TANGO2Q6ICL3 276 aa6.87□□□□□ -1.31
NEDD9-208ENST00000504387 COX15Q7KZN9 410 aa6.87□□□□□ -1.31
NEDD9-208ENST00000504387 RNF144BQ7Z419 303 aa6.87□□□□□ -1.31
NEDD9-208ENST00000504387 FJX1Q86VR8 437 aa6.87□□□□□ -1.31
NEDD9-208ENST00000504387 COMMD2Q86X83 199 aa6.87□□□□□ -1.31
NEDD9-208ENST00000504387 HIST1H2BAQ96A08 127 aa6.87□□□□□ -1.31
NEDD9-208ENST00000504387 PIK3IP1Q96FE7 263 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms