RNA–Protein interactions for RNA: ENST00000503215.5

SCLT1-204, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,364 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-204ENST00000503215 MSL2Q9HCI7 577 aa13.81□□□□□ -0.2
SCLT1-204ENST00000503215 BATF3Q9NR55 127 aa13.81□□□□□ -0.2
SCLT1-204ENST00000503215 DECR2Q9NUI1 292 aa13.81□□□□□ -0.2
SCLT1-204ENST00000503215 DCAF13Q9NV06 445 aaKnown RBP13.81□□□□□ -0.2
SCLT1-204ENST00000503215 DCAF16Q9NXF7 216 aa13.81□□□□□ -0.2
SCLT1-204ENST00000503215 ADA2Q9NZK5 511 aa13.81□□□□□ -0.2
SCLT1-204ENST00000503215 KLHL21Q9UJP4 597 aa13.81□□□□□ -0.2
SCLT1-204ENST00000503215 A0A1W2PRQ8 180 aa13.8□□□□□ -0.2
SCLT1-204ENST00000503215 C12orf71A8MTZ7 269 aa13.8□□□□□ -0.2
SCLT1-204ENST00000503215 GPANK1O95872 356 aa13.8□□□□□ -0.2
SCLT1-204ENST00000503215 AVPP01185 164 aa13.8□□□□□ -0.2
SCLT1-204ENST00000503215 TFP02787 698 aa13.8□□□□□ -0.2
SCLT1-204ENST00000503215 GUCA1AP43080 201 aaPredicted RBP13.8□□□□□ -0.2
SCLT1-204ENST00000503215 PCBD1P61457 104 aa13.8□□□□□ -0.2
SCLT1-204ENST00000503215 PSG7Q13046 419 aa13.8□□□□□ -0.2
SCLT1-204ENST00000503215 DGCR6Q14129 220 aa13.8□□□□□ -0.2
SCLT1-204ENST00000503215 SNCBQ16143 134 aa13.8□□□□□ -0.2
SCLT1-204ENST00000503215 C1orf229Q6ZS94 237 aaPredicted RBP13.8□□□□□ -0.2
SCLT1-204ENST00000503215 PTCHD4Q6ZW05 846 aa13.8□□□□□ -0.2
SCLT1-204ENST00000503215 RRM2BQ7LG56 351 aa13.8□□□□□ -0.2
SCLT1-204ENST00000503215 GLCCI1Q86VQ1 547 aa13.8□□□□□ -0.2
SCLT1-204ENST00000503215 CYP4Z1Q86W10 505 aa13.8□□□□□ -0.2
SCLT1-204ENST00000503215 ALDH16A1Q8IZ83 802 aa13.8□□□□□ -0.2
SCLT1-204ENST00000503215 ZNF570Q96NI8 536 aa13.8□□□□□ -0.2
SCLT1-204ENST00000503215 SYT4Q9H2B2 425 aa13.8□□□□□ -0.2
SCLT1-204ENST00000503215 ANKRD19PQ9H560 264 aa13.8□□□□□ -0.2
SCLT1-204ENST00000503215 RERGLQ9H628 205 aa13.8□□□□□ -0.2
SCLT1-204ENST00000503215 SAP30LQ9HAJ7 183 aa13.8□□□□□ -0.2
SCLT1-204ENST00000503215 COA3Q9Y2R0 106 aaPredicted RBP13.8□□□□□ -0.2
SCLT1-204ENST00000503215 WIPI2Q9Y4P8 454 aa13.8□□□□□ -0.2
SCLT1-204ENST00000503215 IER3IP1Q9Y5U9 82 aa13.8□□□□□ -0.2
SCLT1-204ENST00000503215 ARHGAP32A7KAX9 2087 aa13.79□□□□□ -0.2
SCLT1-204ENST00000503215 SOCS2O14508 198 aa13.79□□□□□ -0.2
SCLT1-204ENST00000503215 SLC16A7O60669 478 aa13.79□□□□□ -0.2
SCLT1-204ENST00000503215 ICMTO60725 284 aa13.79□□□□□ -0.2
SCLT1-204ENST00000503215 DEAF1O75398 565 aaPredicted RBP13.79□□□□□ -0.2
SCLT1-204ENST00000503215 RHCEP18577 417 aa13.79□□□□□ -0.2
SCLT1-204ENST00000503215 CDKN2AP42771 156 aaKnown RBP13.79□□□□□ -0.2
SCLT1-204ENST00000503215 KRR1Q13601 381 aaKnown RBP13.79□□□□□ -0.2
SCLT1-204ENST00000503215 MOGQ16653 247 aa13.79□□□□□ -0.2
SCLT1-204ENST00000503215 VASH1Q7L8A9 365 aaPredicted RBP13.79□□□□□ -0.2
SCLT1-204ENST00000503215 CCL17Q92583 94 aa13.79□□□□□ -0.2
SCLT1-204ENST00000503215 CMTM5Q96DZ9 223 aa13.79□□□□□ -0.2
SCLT1-204ENST00000503215 RSRC1Q96IZ7 334 aaKnown RBP13.79□□□□□ -0.2
SCLT1-204ENST00000503215 DHRS1Q96LJ7 313 aa13.79□□□□□ -0.2
SCLT1-204ENST00000503215 METTL17Q9H7H0 456 aaPredicted RBP13.79□□□□□ -0.2
SCLT1-204ENST00000503215 ZNF665Q9H7R5 613 aa13.79□□□□□ -0.2
SCLT1-204ENST00000503215 SPAG4Q9NPE6 437 aa13.79□□□□□ -0.2
SCLT1-204ENST00000503215 NRIP3Q9NQ35 241 aa13.79□□□□□ -0.2
SCLT1-204ENST00000503215 RPS6KA6Q9UK32 745 aa13.79□□□□□ -0.2
SCLT1-204ENST00000503215 TMEM5Q9Y2B1 443 aa13.79□□□□□ -0.2
SCLT1-204ENST00000503215 FAM32AQ9Y421 112 aaKnown RBP13.79□□□□□ -0.2
SCLT1-204ENST00000503215 WNK2Q9Y3S1 2297 aa13.78□□□□□ -0.2
SCLT1-204ENST00000503215 DCTN6O00399 190 aa13.78□□□□□ -0.2
SCLT1-204ENST00000503215 XKRYO14609 159 aa13.78□□□□□ -0.2
SCLT1-204ENST00000503215 SNX3O60493 162 aa13.78□□□□□ -0.2
SCLT1-204ENST00000503215 DOK2O60496 412 aa13.78□□□□□ -0.2
SCLT1-204ENST00000503215 DNAJC8O75937 253 aaPredicted RBP13.78□□□□□ -0.2
SCLT1-204ENST00000503215 UBOX5O94941 541 aa13.78□□□□□ -0.2
SCLT1-204ENST00000503215 NDUFB2O95178 105 aa13.78□□□□□ -0.2
SCLT1-204ENST00000503215 MT-ND5P03915 603 aa13.78□□□□□ -0.2
SCLT1-204ENST00000503215 ITGA2P17301 1181 aa13.78□□□□□ -0.2
SCLT1-204ENST00000503215 HTR5AP47898 357 aa13.78□□□□□ -0.2
SCLT1-204ENST00000503215 ERFP50548 548 aa13.78□□□□□ -0.2
SCLT1-204ENST00000503215 SYT9Q86SS6 491 aa13.78□□□□□ -0.2
SCLT1-204ENST00000503215 TSSK2Q96PF2 358 aa13.78□□□□□ -0.2
SCLT1-204ENST00000503215 NUAK2Q9H093 628 aa13.78□□□□□ -0.2
SCLT1-204ENST00000503215 STARD10Q9Y365 291 aa13.78□□□□□ -0.2
SCLT1-204ENST00000503215 PLSCR5A0PG75 271 aa13.77□□□□□ -0.21
SCLT1-204ENST00000503215 UNC119BA6NIH7 251 aa13.77□□□□□ -0.21
SCLT1-204ENST00000503215 ANKRD65E5RJM6 399 aa13.77□□□□□ -0.21
SCLT1-204ENST00000503215 SGCEO43556 437 aa13.77□□□□□ -0.21
SCLT1-204ENST00000503215 PLPP2O43688 288 aa13.77□□□□□ -0.21
SCLT1-204ENST00000503215 KHDRBS3O75525 346 aaKnown RBP13.77□□□□□ -0.21
SCLT1-204ENST00000503215 RGS9O75916 674 aaPredicted RBP13.77□□□□□ -0.21
SCLT1-204ENST00000503215 ABHD16AO95870 558 aa13.77□□□□□ -0.21
SCLT1-204ENST00000503215 DBHP09172 617 aa13.77□□□□□ -0.21
SCLT1-204ENST00000503215 PRDX6P30041 224 aa13.77□□□□□ -0.21
SCLT1-204ENST00000503215 SDHAP31040 664 aa13.77□□□□□ -0.21
SCLT1-204ENST00000503215 TEKQ02763 1124 aa13.77□□□□□ -0.21
SCLT1-204ENST00000503215 RIPK1Q13546 671 aa13.77□□□□□ -0.21
SCLT1-204ENST00000503215 MEP1BQ16820 701 aa13.77□□□□□ -0.21
SCLT1-204ENST00000503215 HFEQ30201 348 aa13.77□□□□□ -0.21
SCLT1-204ENST00000503215 CCDC92Q53HC0 331 aaPredicted RBP13.77□□□□□ -0.21
SCLT1-204ENST00000503215 FAM209AQ5JX71 171 aa13.77□□□□□ -0.21
SCLT1-204ENST00000503215 FAHD2BQ6P2I3 314 aaPredicted RBP13.77□□□□□ -0.21
SCLT1-204ENST00000503215 Q6ZR03 302 aa13.77□□□□□ -0.21
SCLT1-204ENST00000503215 ZER1Q7Z7L7 766 aa13.77□□□□□ -0.21
SCLT1-204ENST00000503215 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.77□□□□□ -0.21
SCLT1-204ENST00000503215 OR51F2Q8NH61 342 aa13.77□□□□□ -0.21
SCLT1-204ENST00000503215 FAHD2AQ96GK7 314 aa13.77□□□□□ -0.21
SCLT1-204ENST00000503215 GPX7Q96SL4 187 aaPredicted RBP13.77□□□□□ -0.21
SCLT1-204ENST00000503215 G6PC2Q9NQR9 355 aa13.77□□□□□ -0.21
SCLT1-204ENST00000503215 VSX1Q9NZR4 365 aaPredicted RBP13.77□□□□□ -0.21
SCLT1-204ENST00000503215 ASH2LQ9UBL3 628 aa13.77□□□□□ -0.21
SCLT1-204ENST00000503215 GRIP1Q9Y3R0 1128 aa13.77□□□□□ -0.21
SCLT1-204ENST00000503215 CLDN25C9JDP6 229 aa13.76□□□□□ -0.21
SCLT1-204ENST00000503215 RER1O15258 196 aa13.76□□□□□ -0.21
SCLT1-204ENST00000503215 AHCYL1O43865 530 aa13.76□□□□□ -0.21
SCLT1-204ENST00000503215 PPP1R3DO95685 299 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms