RNA–Protein interactions for RNA: ENST00000502820.1

HTT-202, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 287 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-202ENST00000502820 CHMP1BQ7LBR1 199 aa4.61□□□□□ -1.67
HTT-202ENST00000502820 FAM122BQ7Z309 247 aa4.61□□□□□ -1.67
HTT-202ENST00000502820 UBE3DQ7Z6J8 389 aa4.61□□□□□ -1.67
HTT-202ENST00000502820 VTCN1Q7Z7D3 282 aa4.61□□□□□ -1.67
HTT-202ENST00000502820 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.61□□□□□ -1.67
HTT-202ENST00000502820 ARL6IP6Q8N6S5 226 aa4.61□□□□□ -1.67
HTT-202ENST00000502820 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.61□□□□□ -1.67
HTT-202ENST00000502820 CNEP1R1Q8N9A8 125 aa4.61□□□□□ -1.67
HTT-202ENST00000502820 AQP11Q8NBQ7 271 aa4.61□□□□□ -1.67
HTT-202ENST00000502820 PXT1Q8NFP0 134 aa4.61□□□□□ -1.67
HTT-202ENST00000502820 OR52I1Q8NGK6 324 aa4.61□□□□□ -1.67
HTT-202ENST00000502820 MOSPD2Q8NHP6 518 aa4.61□□□□□ -1.67
HTT-202ENST00000502820 GNPDA2Q8TDQ7 276 aa4.61□□□□□ -1.67
HTT-202ENST00000502820 SFT2D1Q8WV19 159 aa4.61□□□□□ -1.67
HTT-202ENST00000502820 SMIM4Q8WVI0 70 aa4.61□□□□□ -1.67
HTT-202ENST00000502820 THRSPQ92748 146 aa4.61□□□□□ -1.67
HTT-202ENST00000502820 GCDHQ92947 438 aaPredicted RBP4.61□□□□□ -1.67
HTT-202ENST00000502820 ELMOD3Q96FG2 381 aa4.61□□□□□ -1.67
HTT-202ENST00000502820 MRPL48Q96GC5 212 aaKnown RBP4.61□□□□□ -1.67
HTT-202ENST00000502820 TPD52L3Q96J77 140 aa4.61□□□□□ -1.67
HTT-202ENST00000502820 SERINC2Q96SA4 455 aa4.61□□□□□ -1.67
HTT-202ENST00000502820 EFCAB11Q9BUY7 163 aa4.61□□□□□ -1.67
HTT-202ENST00000502820 DUSP26Q9BV47 211 aa4.61□□□□□ -1.67
HTT-202ENST00000502820 MS4A8Q9BY19 250 aa4.61□□□□□ -1.67
HTT-202ENST00000502820 ACPTQ9BZG2 426 aa4.61□□□□□ -1.67
HTT-202ENST00000502820 C20orf85Q9H1P6 137 aa4.61□□□□□ -1.67
HTT-202ENST00000502820 SAV1Q9H4B6 383 aaPredicted RBP4.61□□□□□ -1.67
HTT-202ENST00000502820 NMNAT1Q9HAN9 279 aaPredicted RBP4.61□□□□□ -1.67
HTT-202ENST00000502820 TCF7L1Q9HCS4 588 aa4.61□□□□□ -1.67
HTT-202ENST00000502820 LYRM4Q9HD34 91 aa4.61□□□□□ -1.67
HTT-202ENST00000502820 KRCC1Q9NPI7 259 aaPredicted RBP4.61□□□□□ -1.67
HTT-202ENST00000502820 SLC35C2Q9NQQ7 365 aa4.61□□□□□ -1.67
HTT-202ENST00000502820 PRDM7Q9NQW5 492 aa4.61□□□□□ -1.67
HTT-202ENST00000502820 ZFP57Q9NU63 452 aa4.61□□□□□ -1.67
HTT-202ENST00000502820 ACER3Q9NUN7 267 aa4.61□□□□□ -1.67
HTT-202ENST00000502820 TAS2R8Q9NYW2 309 aa4.61□□□□□ -1.67
HTT-202ENST00000502820 TAS2R5Q9NYW4 299 aa4.61□□□□□ -1.67
HTT-202ENST00000502820 RPS6KB2Q9UBS0 482 aa4.61□□□□□ -1.67
HTT-202ENST00000502820 LPAR3Q9UBY5 353 aa4.61□□□□□ -1.67
HTT-202ENST00000502820 ZNF223Q9UK11 482 aaPredicted RBP4.61□□□□□ -1.67
HTT-202ENST00000502820 SPATA2Q9UM82 520 aa4.61□□□□□ -1.67
HTT-202ENST00000502820 DAPP1Q9UN19 280 aa4.61□□□□□ -1.67
HTT-202ENST00000502820 YARS2Q9Y2Z4 477 aaKnown RBP4.61□□□□□ -1.67
HTT-202ENST00000502820 POMT1Q9Y6A1 747 aa4.61□□□□□ -1.67
HTT-202ENST00000502820 GTF3C1Q12789 2109 aa4.61□□□□□ -1.67
HTT-202ENST00000502820 MXRA5Q9NR99 2828 aa4.6□□□□□ -1.67
HTT-202ENST00000502820 DOCK10Q96BY6 2186 aa4.6□□□□□ -1.67
HTT-202ENST00000502820 TRAV1-2A0A0B4J238 106 aa4.6□□□□□ -1.67
HTT-202ENST00000502820 SYNDIG1LA6NDD5 238 aa4.6□□□□□ -1.67
HTT-202ENST00000502820 ZNF729A6NN14 1252 aaPredicted RBP4.6□□□□□ -1.67
HTT-202ENST00000502820 DEFB108AA8MXU0 73 aa4.6□□□□□ -1.67
HTT-202ENST00000502820 MCRIP1C9JLW8 97 aa4.6□□□□□ -1.67
HTT-202ENST00000502820 ZNF593O00488 134 aaPredicted RBP4.6□□□□□ -1.67
HTT-202ENST00000502820 GABRPO00591 440 aa4.6□□□□□ -1.67
HTT-202ENST00000502820 UBE2CO00762 179 aa4.6□□□□□ -1.67
HTT-202ENST00000502820 PGRMC2O15173 223 aa4.6□□□□□ -1.67
HTT-202ENST00000502820 ST8SIA5O15466 376 aa4.6□□□□□ -1.67
HTT-202ENST00000502820 B3GALT2O43825 422 aa4.6□□□□□ -1.67
HTT-202ENST00000502820 PRKNO60260 465 aaPredicted RBP4.6□□□□□ -1.67
HTT-202ENST00000502820 LMX1BO60663 402 aa4.6□□□□□ -1.67
HTT-202ENST00000502820 EIF1BO60739 113 aaKnown RBP4.6□□□□□ -1.67
HTT-202ENST00000502820 HPGDSO60760 199 aa4.6□□□□□ -1.67
HTT-202ENST00000502820 TBX19O60806 448 aa4.6□□□□□ -1.67
HTT-202ENST00000502820 NDUFS7O75251 213 aa4.6□□□□□ -1.67
HTT-202ENST00000502820 ZFAND5O76080 213 aa4.6□□□□□ -1.67
HTT-202ENST00000502820 GLSO94925 669 aaPredicted RBP4.6□□□□□ -1.67
HTT-202ENST00000502820 OR2F2O95006 317 aa4.6□□□□□ -1.67
HTT-202ENST00000502820 HTR3BO95264 441 aa4.6□□□□□ -1.67
HTT-202ENST00000502820 PLAUP00749 431 aa4.6□□□□□ -1.67
HTT-202ENST00000502820 IFNA10P01566 189 aa4.6□□□□□ -1.67
HTT-202ENST00000502820 APOC3P02656 99 aa4.6□□□□□ -1.67
HTT-202ENST00000502820 TFP02787 698 aa4.6□□□□□ -1.67
HTT-202ENST00000502820 HIST1H2ABP04908 130 aa4.6□□□□□ -1.67
HTT-202ENST00000502820 FBP1P09467 338 aa4.6□□□□□ -1.67
HTT-202ENST00000502820 CCL3P10147 92 aa4.6□□□□□ -1.67
HTT-202ENST00000502820 PSMB1P20618 241 aaKnown RBP4.6□□□□□ -1.67
HTT-202ENST00000502820 HNF1AP20823 631 aa4.6□□□□□ -1.67
HTT-202ENST00000502820 ZNF10P21506 573 aaPredicted RBP4.6□□□□□ -1.67
HTT-202ENST00000502820 HIST1H1TP22492 207 aaPredicted RBP4.6□□□□□ -1.67
HTT-202ENST00000502820 ATP5A1P25705 553 aaKnown RBP4.6□□□□□ -1.67
HTT-202ENST00000502820 CERS1P27544 350 aa4.6□□□□□ -1.67
HTT-202ENST00000502820 PPP2R1BP30154 601 aa4.6□□□□□ -1.67
HTT-202ENST00000502820 CEACAM8P31997 349 aaPredicted RBP4.6□□□□□ -1.67
HTT-202ENST00000502820 TIMP3P35625 211 aa4.6□□□□□ -1.67
HTT-202ENST00000502820 SRP14P37108 136 aaKnown RBP4.6□□□□□ -1.67
HTT-202ENST00000502820 EIF1P41567 113 aaKnown RBP4.6□□□□□ -1.67
HTT-202ENST00000502820 SLC1A3P43003 542 aa4.6□□□□□ -1.67
HTT-202ENST00000502820 MTNR1AP48039 350 aa4.6□□□□□ -1.67
HTT-202ENST00000502820 CENPAP49450 140 aa4.6□□□□□ -1.67
HTT-202ENST00000502820 CTBP2P56545 445 aa4.6□□□□□ -1.67
HTT-202ENST00000502820 IRF8Q02556 426 aa4.6□□□□□ -1.67
HTT-202ENST00000502820 RELQ04864 619 aaPredicted RBP4.6□□□□□ -1.67
HTT-202ENST00000502820 ACSM2AQ08AH3 577 aa4.6□□□□□ -1.67
HTT-202ENST00000502820 PPP1R8Q12972 351 aaKnown RBP4.6□□□□□ -1.67
HTT-202ENST00000502820 CHIT1Q13231 466 aa4.6□□□□□ -1.67
HTT-202ENST00000502820 SNTB2Q13425 540 aaKnown RBP4.6□□□□□ -1.67
HTT-202ENST00000502820 OR2F1Q13607 317 aa4.6□□□□□ -1.67
HTT-202ENST00000502820 SCARB2Q14108 478 aa4.6□□□□□ -1.67
HTT-202ENST00000502820 ELAVL1Q15717 326 aaKnown RBP4.6□□□□□ -1.67
HTT-202ENST00000502820 NKPD1Q17RQ9 610 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms