RNA–Protein interactions for RNA: ENST00000493618.5

ATG4B-223, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 899 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-223ENST00000493618 ACSM5Q6NUN0 579 aa12.43□□□□□ -0.42
ATG4B-223ENST00000493618 C1orf94Q6P1W5 598 aa12.43□□□□□ -0.42
ATG4B-223ENST00000493618 SHQ1Q6PI26 577 aaKnown RBP12.43□□□□□ -0.42
ATG4B-223ENST00000493618 UNQ6126/PRO20091Q6UXV3 157 aa12.43□□□□□ -0.42
ATG4B-223ENST00000493618 FAM122BQ7Z309 247 aa12.43□□□□□ -0.42
ATG4B-223ENST00000493618 SLC7A6Q92536 515 aa12.43□□□□□ -0.42
ATG4B-223ENST00000493618 FAM107BQ9H098 131 aa12.43□□□□□ -0.42
ATG4B-223ENST00000493618 ELOVL3Q9HB03 270 aa12.43□□□□□ -0.42
ATG4B-223ENST00000493618 ADA2Q9NZK5 511 aa12.43□□□□□ -0.42
ATG4B-223ENST00000493618 ABCD2Q9UBJ2 740 aa12.43□□□□□ -0.42
ATG4B-223ENST00000493618 RPS6KA6Q9UK32 745 aa12.43□□□□□ -0.42
ATG4B-223ENST00000493618 COA3Q9Y2R0 106 aaPredicted RBP12.43□□□□□ -0.42
ATG4B-223ENST00000493618 NBEAL1Q6ZS30 2694 aa12.42□□□□□ -0.42
ATG4B-223ENST00000493618 LOC105371242A0A075B767 164 aa12.42□□□□□ -0.42
ATG4B-223ENST00000493618 TRAV20A0A0B4J274 112 aa12.42□□□□□ -0.42
ATG4B-223ENST00000493618 TRBV4-1A0A0J9YWV2 114 aa12.42□□□□□ -0.42
ATG4B-223ENST00000493618 ISPDA4D126 451 aa12.42□□□□□ -0.42
ATG4B-223ENST00000493618 PLPP2O43688 288 aa12.42□□□□□ -0.42
ATG4B-223ENST00000493618 SLC16A7O60669 478 aa12.42□□□□□ -0.42
ATG4B-223ENST00000493618 PTP4A3O75365 173 aa12.42□□□□□ -0.42
ATG4B-223ENST00000493618 DEAF1O75398 565 aaPredicted RBP12.42□□□□□ -0.42
ATG4B-223ENST00000493618 NDUFB2O95178 105 aa12.42□□□□□ -0.42
ATG4B-223ENST00000493618 VENTXO95231 258 aa12.42□□□□□ -0.42
ATG4B-223ENST00000493618 GPANK1O95872 356 aa12.42□□□□□ -0.42
ATG4B-223ENST00000493618 PNPP00491 289 aa12.42□□□□□ -0.42
ATG4B-223ENST00000493618 AVPP01185 164 aa12.42□□□□□ -0.42
ATG4B-223ENST00000493618 IGHV2-5P01817 119 aa12.42□□□□□ -0.42
ATG4B-223ENST00000493618 PSG7Q13046 419 aa12.42□□□□□ -0.42
ATG4B-223ENST00000493618 FAM209AQ5JX71 171 aa12.42□□□□□ -0.42
ATG4B-223ENST00000493618 C1orf229Q6ZS94 237 aaPredicted RBP12.42□□□□□ -0.42
ATG4B-223ENST00000493618 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.42□□□□□ -0.42
ATG4B-223ENST00000493618 SYT9Q86SS6 491 aa12.42□□□□□ -0.42
ATG4B-223ENST00000493618 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.42□□□□□ -0.42
ATG4B-223ENST00000493618 FAM156AQ8NDB6 213 aa12.42□□□□□ -0.42
ATG4B-223ENST00000493618 OR52J3Q8NH60 311 aa12.42□□□□□ -0.42
ATG4B-223ENST00000493618 RAB1CQ92928 201 aa12.42□□□□□ -0.42
ATG4B-223ENST00000493618 TIMD4Q96H15 378 aa12.42□□□□□ -0.42
ATG4B-223ENST00000493618 RSRC1Q96IZ7 334 aaKnown RBP12.42□□□□□ -0.42
ATG4B-223ENST00000493618 MYLK2Q9H1R3 596 aa12.42□□□□□ -0.42
ATG4B-223ENST00000493618 SYT4Q9H2B2 425 aa12.42□□□□□ -0.42
ATG4B-223ENST00000493618 ANKRD19PQ9H560 264 aa12.42□□□□□ -0.42
ATG4B-223ENST00000493618 MED4Q9NPJ6 270 aa12.42□□□□□ -0.42
ATG4B-223ENST00000493618 G6PC2Q9NQR9 355 aa12.42□□□□□ -0.42
ATG4B-223ENST00000493618 DCAF16Q9NXF7 216 aa12.42□□□□□ -0.42
ATG4B-223ENST00000493618 NDUFAF4Q9P032 175 aa12.42□□□□□ -0.42
ATG4B-223ENST00000493618 NDRG4Q9ULP0 352 aaKnown RBP12.42□□□□□ -0.42
ATG4B-223ENST00000493618 TMEM5Q9Y2B1 443 aa12.42□□□□□ -0.42
ATG4B-223ENST00000493618 FAM32AQ9Y421 112 aaKnown RBP12.42□□□□□ -0.42
ATG4B-223ENST00000493618 IER3IP1Q9Y5U9 82 aa12.42□□□□□ -0.42
ATG4B-223ENST00000493618 UNC119BA6NIH7 251 aa12.41□□□□□ -0.42
ATG4B-223ENST00000493618 HAX1O00165 279 aa12.41□□□□□ -0.42
ATG4B-223ENST00000493618 SGCEO43556 437 aa12.41□□□□□ -0.42
ATG4B-223ENST00000493618 UBOX5O94941 541 aa12.41□□□□□ -0.42
ATG4B-223ENST00000493618 SDHAP31040 664 aa12.41□□□□□ -0.42
ATG4B-223ENST00000493618 OMPP47874 163 aa12.41□□□□□ -0.42
ATG4B-223ENST00000493618 LIMS1P48059 325 aa12.41□□□□□ -0.42
ATG4B-223ENST00000493618 CENPAP49450 140 aa12.41□□□□□ -0.42
ATG4B-223ENST00000493618 ERFP50548 548 aa12.41□□□□□ -0.42
ATG4B-223ENST00000493618 FXYD6P3P58550 94 aa12.41□□□□□ -0.42
ATG4B-223ENST00000493618 SCRN3Q0VDG4 424 aa12.41□□□□□ -0.42
ATG4B-223ENST00000493618 DBPQ10586 325 aaPredicted RBP12.41□□□□□ -0.42
ATG4B-223ENST00000493618 PTCHD4Q6ZW05 846 aa12.41□□□□□ -0.42
ATG4B-223ENST00000493618 VASH1Q7L8A9 365 aaPredicted RBP12.41□□□□□ -0.42
ATG4B-223ENST00000493618 RAB39BQ96DA2 213 aa12.41□□□□□ -0.42
ATG4B-223ENST00000493618 CMTM5Q96DZ9 223 aa12.41□□□□□ -0.42
ATG4B-223ENST00000493618 C7orf34Q96L11 122 aa12.41□□□□□ -0.42
ATG4B-223ENST00000493618 DCLRE1CQ96SD1 692 aaKnown RBP12.41□□□□□ -0.42
ATG4B-223ENST00000493618 GPA33Q99795 319 aa12.41□□□□□ -0.42
ATG4B-223ENST00000493618 GAL3ST1Q99999 423 aa12.41□□□□□ -0.42
ATG4B-223ENST00000493618 NDEL1Q9GZM8 345 aa12.41□□□□□ -0.42
ATG4B-223ENST00000493618 EGLN1Q9GZT9 426 aa12.41□□□□□ -0.42
ATG4B-223ENST00000493618 CYSLTR2Q9NS75 346 aa12.41□□□□□ -0.42
ATG4B-223ENST00000493618 PLEK2Q9NYT0 353 aa12.41□□□□□ -0.42
ATG4B-223ENST00000493618 UBAP1Q9NZ09 502 aa12.41□□□□□ -0.42
ATG4B-223ENST00000493618 KLHL21Q9UJP4 597 aa12.41□□□□□ -0.42
ATG4B-223ENST00000493618 AURKCQ9UQB9 309 aa12.41□□□□□ -0.42
ATG4B-223ENST00000493618 SIGLEC7Q9Y286 467 aa12.41□□□□□ -0.42
ATG4B-223ENST00000493618 STARD10Q9Y365 291 aa12.41□□□□□ -0.42
ATG4B-223ENST00000493618 A0A1W2PRQ8 180 aa12.4□□□□□ -0.42
ATG4B-223ENST00000493618 H3BSA7 217 aa12.4□□□□□ -0.42
ATG4B-223ENST00000493618 NDUFAB1O14561 156 aa12.4□□□□□ -0.42
ATG4B-223ENST00000493618 ICMTO60725 284 aa12.4□□□□□ -0.42
ATG4B-223ENST00000493618 KHDRBS3O75525 346 aaKnown RBP12.4□□□□□ -0.42
ATG4B-223ENST00000493618 PPP1R3DO95685 299 aa12.4□□□□□ -0.42
ATG4B-223ENST00000493618 DBHP09172 617 aa12.4□□□□□ -0.42
ATG4B-223ENST00000493618 ANPEPP15144 967 aa12.4□□□□□ -0.42
ATG4B-223ENST00000493618 RHCEP18577 417 aa12.4□□□□□ -0.42
ATG4B-223ENST00000493618 ADRA2CP18825 462 aa12.4□□□□□ -0.42
ATG4B-223ENST00000493618 GSTM3P21266 225 aa12.4□□□□□ -0.42
ATG4B-223ENST00000493618 MSX2P35548 267 aaPredicted RBP12.4□□□□□ -0.42
ATG4B-223ENST00000493618 LCN2P80188 198 aa12.4□□□□□ -0.42
ATG4B-223ENST00000493618 TNFAIP6P98066 277 aaPredicted RBP12.4□□□□□ -0.42
ATG4B-223ENST00000493618 DGCR6Q14129 220 aa12.4□□□□□ -0.42
ATG4B-223ENST00000493618 CCDC92Q53HC0 331 aaPredicted RBP12.4□□□□□ -0.42
ATG4B-223ENST00000493618 MTX3Q5HYI7 312 aa12.4□□□□□ -0.42
ATG4B-223ENST00000493618 ARL9Q6T311 187 aa12.4□□□□□ -0.42
ATG4B-223ENST00000493618 Q6ZR03 302 aa12.4□□□□□ -0.42
ATG4B-223ENST00000493618 OR2Z1Q8NG97 314 aa12.4□□□□□ -0.42
ATG4B-223ENST00000493618 CMBLQ96DG6 245 aa12.4□□□□□ -0.42
ATG4B-223ENST00000493618 TSSK2Q96PF2 358 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms