RNA–Protein interactions for RNA: ENST00000493208.1

IRF1-210, Transcript of interferon regulatory factor 1, humanhuman

TSL 1 (best)

Gene IRF1, Length 1,023 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-210ENST00000493208 ELFN2Q5R3F8 820 aa11.63□□□□□ -0.55
IRF1-210ENST00000493208 TBPL2Q6SJ96 375 aa11.63□□□□□ -0.55
IRF1-210ENST00000493208 LRP11Q86VZ4 500 aa11.63□□□□□ -0.55
IRF1-210ENST00000493208 GJC3Q8NFK1 279 aa11.63□□□□□ -0.55
IRF1-210ENST00000493208 OR52J3Q8NH60 311 aa11.63□□□□□ -0.55
IRF1-210ENST00000493208 KLF14Q8TD94 323 aaPredicted RBP11.63□□□□□ -0.55
IRF1-210ENST00000493208 Q96M85 177 aa11.63□□□□□ -0.55
IRF1-210ENST00000493208 CDADC1Q9BWV3 514 aa11.63□□□□□ -0.55
IRF1-210ENST00000493208 ZNF275Q9NSD4 429 aaPredicted RBP11.63□□□□□ -0.55
IRF1-210ENST00000493208 SIGLEC7Q9Y286 467 aa11.63□□□□□ -0.55
IRF1-210ENST00000493208 ARFGEF3Q5TH69 2177 aa11.62□□□□□ -0.55
IRF1-210ENST00000493208 CR1P17927 2039 aa11.62□□□□□ -0.55
IRF1-210ENST00000493208 TRAV20A0A0B4J274 112 aa11.62□□□□□ -0.55
IRF1-210ENST00000493208 IFNL4K9M1U5 179 aa11.62□□□□□ -0.55
IRF1-210ENST00000493208 CDC42EP2O14613 210 aa11.62□□□□□ -0.55
IRF1-210ENST00000493208 FPR3P25089 353 aa11.62□□□□□ -0.55
IRF1-210ENST00000493208 OMPP47874 163 aa11.62□□□□□ -0.55
IRF1-210ENST00000493208 CCNIQ14094 377 aa11.62□□□□□ -0.55
IRF1-210ENST00000493208 CR1LQ2VPA4 569 aa11.62□□□□□ -0.55
IRF1-210ENST00000493208 MESTQ5EB52 335 aa11.62□□□□□ -0.55
IRF1-210ENST00000493208 ACSM5Q6NUN0 579 aa11.62□□□□□ -0.55
IRF1-210ENST00000493208 ZNF774Q6NX45 483 aa11.62□□□□□ -0.55
IRF1-210ENST00000493208 SLC27A4Q6P1M0 643 aa11.62□□□□□ -0.55
IRF1-210ENST00000493208 PAQR4Q8N4S7 273 aaPredicted RBP11.62□□□□□ -0.55
IRF1-210ENST00000493208 RNF148Q8N7C7 305 aa11.62□□□□□ -0.55
IRF1-210ENST00000493208 OR2AJ1Q8NGZ0 328 aa11.62□□□□□ -0.55
IRF1-210ENST00000493208 SLC25A40Q8TBP6 338 aa11.62□□□□□ -0.55
IRF1-210ENST00000493208 CDRT15Q96T59 188 aa11.62□□□□□ -0.55
IRF1-210ENST00000493208 IFT27Q9BW83 186 aa11.62□□□□□ -0.55
IRF1-210ENST00000493208 OR2J1Q9GZK6 312 aa11.62□□□□□ -0.55
IRF1-210ENST00000493208 HDHD2Q9H0R4 259 aa11.62□□□□□ -0.55
IRF1-210ENST00000493208 SYT4Q9H2B2 425 aa11.62□□□□□ -0.55
IRF1-210ENST00000493208 VSX1Q9NZR4 365 aaPredicted RBP11.62□□□□□ -0.55
IRF1-210ENST00000493208 ADAM18Q9Y3Q7 739 aa11.62□□□□□ -0.55
IRF1-210ENST00000493208 IER3IP1Q9Y5U9 82 aa11.62□□□□□ -0.55
IRF1-210ENST00000493208 ALPK2Q86TB3 2170 aa11.61□□□□□ -0.55
IRF1-210ENST00000493208 ZANQ9Y493 2812 aa11.61□□□□□ -0.55
IRF1-210ENST00000493208 H7C1C5 153 aa11.61□□□□□ -0.55
IRF1-210ENST00000493208 SOCS2O14508 198 aa11.61□□□□□ -0.55
IRF1-210ENST00000493208 PTP4A3O75365 173 aa11.61□□□□□ -0.55
IRF1-210ENST00000493208 TXNDC12O95881 172 aa11.61□□□□□ -0.55
IRF1-210ENST00000493208 CLPTM1O96005 669 aa11.61□□□□□ -0.55
IRF1-210ENST00000493208 MSMBP08118 114 aa11.61□□□□□ -0.55
IRF1-210ENST00000493208 SELEP16581 610 aa11.61□□□□□ -0.55
IRF1-210ENST00000493208 GATA3P23771 443 aa11.61□□□□□ -0.55
IRF1-210ENST00000493208 LIMS1P48059 325 aa11.61□□□□□ -0.55
IRF1-210ENST00000493208 LCN6P62502 163 aa11.61□□□□□ -0.55
IRF1-210ENST00000493208 ECH1Q13011 328 aa11.61□□□□□ -0.55
IRF1-210ENST00000493208 GK3PQ14409 553 aa11.61□□□□□ -0.55
IRF1-210ENST00000493208 TSTQ16762 297 aaKnown RBP11.61□□□□□ -0.55
IRF1-210ENST00000493208 RFX4Q33E94 735 aa11.61□□□□□ -0.55
IRF1-210ENST00000493208 USP51Q70EK9 711 aa11.61□□□□□ -0.55
IRF1-210ENST00000493208 FAM122BQ7Z309 247 aa11.61□□□□□ -0.55
IRF1-210ENST00000493208 DEFB107AQ8IZN7 70 aa11.61□□□□□ -0.55
IRF1-210ENST00000493208 RFLNBQ8N5W9 214 aa11.61□□□□□ -0.55
IRF1-210ENST00000493208 OR4C15Q8NGM1 316 aa11.61□□□□□ -0.55
IRF1-210ENST00000493208 GNPDA2Q8TDQ7 276 aa11.61□□□□□ -0.55
IRF1-210ENST00000493208 ST7LQ8TDW4 575 aa11.61□□□□□ -0.55
IRF1-210ENST00000493208 TMEM186Q96B77 213 aa11.61□□□□□ -0.55
IRF1-210ENST00000493208 RASD2Q96D21 266 aa11.61□□□□□ -0.55
IRF1-210ENST00000493208 MARS2Q96GW9 593 aaKnown RBP11.61□□□□□ -0.55
IRF1-210ENST00000493208 C1orf159Q96HA4 380 aa11.61□□□□□ -0.55
IRF1-210ENST00000493208 C7orf34Q96L11 122 aa11.61□□□□□ -0.55
IRF1-210ENST00000493208 DHRS1Q96LJ7 313 aa11.61□□□□□ -0.55
IRF1-210ENST00000493208 ERMAPQ96PL5 475 aaPredicted RBP11.61□□□□□ -0.55
IRF1-210ENST00000493208 TRIM15Q9C019 465 aa11.61□□□□□ -0.55
IRF1-210ENST00000493208 WNT5BQ9H1J7 359 aa11.61□□□□□ -0.55
IRF1-210ENST00000493208 IL1RAPQ9NPH3 570 aa11.61□□□□□ -0.55
IRF1-210ENST00000493208 MYEF2Q9P2K5 600 aaKnown RBP11.61□□□□□ -0.55
IRF1-210ENST00000493208 METRNQ9UJH8 293 aa11.61□□□□□ -0.55
IRF1-210ENST00000493208 NOP16Q9Y3C1 178 aaKnown RBP11.61□□□□□ -0.55
IRF1-210ENST00000493208 V9GYQ6 96 aa11.61□□□□□ -0.55
IRF1-210ENST00000493208 LOC100509620A0A075B734 347 aa11.6□□□□□ -0.55
IRF1-210ENST00000493208 IGKV1D-43A0A0B4J1Z2 117 aa11.6□□□□□ -0.55
IRF1-210ENST00000493208 LYNX1G3V0Z9 82 aa11.6□□□□□ -0.55
IRF1-210ENST00000493208 ARPC2O15144 300 aa11.6□□□□□ -0.55
IRF1-210ENST00000493208 ARPC3O15145 178 aa11.6□□□□□ -0.55
IRF1-210ENST00000493208 PHF1O43189 567 aaPredicted RBP11.6□□□□□ -0.55
IRF1-210ENST00000493208 SPRY3O43610 288 aa11.6□□□□□ -0.55
IRF1-210ENST00000493208 CDC14BO60729 498 aa11.6□□□□□ -0.55
IRF1-210ENST00000493208 HLA-DQA2P01906 255 aa11.6□□□□□ -0.55
IRF1-210ENST00000493208 ADH4P08319 380 aa11.6□□□□□ -0.55
IRF1-210ENST00000493208 LYNX1P0DP58 116 aa11.6□□□□□ -0.55
IRF1-210ENST00000493208 COL8A2P25067 703 aa11.6□□□□□ -0.55
IRF1-210ENST00000493208 MAGEB1P43366 347 aa11.6□□□□□ -0.55
IRF1-210ENST00000493208 TRIP10Q15642 601 aa11.6□□□□□ -0.55
IRF1-210ENST00000493208 FAM98BQ52LJ0 330 aaKnown RBP11.6□□□□□ -0.55
IRF1-210ENST00000493208 SPATA46Q5T0L3 261 aa11.6□□□□□ -0.55
IRF1-210ENST00000493208 ZDHHC21Q8IVQ6 265 aa11.6□□□□□ -0.55
IRF1-210ENST00000493208 ZNF101Q8IZC7 436 aa11.6□□□□□ -0.55
IRF1-210ENST00000493208 CLDN22Q8N7P3 220 aa11.6□□□□□ -0.55
IRF1-210ENST00000493208 OR1F12Q8NHA8 337 aa11.6□□□□□ -0.55
IRF1-210ENST00000493208 CLDND2Q8NHS1 167 aa11.6□□□□□ -0.55
IRF1-210ENST00000493208 CCL17Q92583 94 aa11.6□□□□□ -0.55
IRF1-210ENST00000493208 PTP4A1Q93096 173 aa11.6□□□□□ -0.55
IRF1-210ENST00000493208 APOBEC3DQ96AK3 386 aaPredicted RBP11.6□□□□□ -0.55
IRF1-210ENST00000493208 LRGUKQ96M69 825 aa11.6□□□□□ -0.55
IRF1-210ENST00000493208 GAL3ST1Q99999 423 aa11.6□□□□□ -0.55
IRF1-210ENST00000493208 EMC7Q9NPA0 242 aa11.6□□□□□ -0.55
IRF1-210ENST00000493208 ASH2LQ9UBL3 628 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms