RNA–Protein interactions for RNA: ENST00000491881.1

VTA1-204, Transcript of vesicle trafficking 1, humanhuman

TSL 2

Gene VTA1, Length 528 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-204ENST00000491881 FBXL13Q8NEE6 735 aa2.32□□□□□ -2.04
VTA1-204ENST00000491881 ABHD3Q8WU67 409 aa2.32□□□□□ -2.04
VTA1-204ENST00000491881 ZNF578Q96N58 590 aaPredicted RBP2.32□□□□□ -2.04
VTA1-204ENST00000491881 OR5B12Q96R08 314 aa2.32□□□□□ -2.04
VTA1-204ENST00000491881 CCDC77Q9BR77 488 aa2.32□□□□□ -2.04
VTA1-204ENST00000491881 ZNF430Q9H8G1 570 aaPredicted RBP2.32□□□□□ -2.04
VTA1-204ENST00000491881 HMG20AQ9NP66 347 aa2.32□□□□□ -2.04
VTA1-204ENST00000491881 TRMT112Q9UI30 125 aaKnown RBP2.32□□□□□ -2.04
VTA1-204ENST00000491881 MTCL1Q9Y4B5 1905 aaKnown RBP2.32□□□□□ -2.04
VTA1-204ENST00000491881 FASNP49327 2511 aaKnown RBP2.32□□□□□ -2.04
VTA1-204ENST00000491881 BLMP54132 1417 aaPredicted RBP2.32□□□□□ -2.04
VTA1-204ENST00000491881 FBN3Q75N90 2809 aa2.32□□□□□ -2.04
VTA1-204ENST00000491881 MAP3K4Q9Y6R4 1608 aa2.31□□□□□ -2.04
VTA1-204ENST00000491881 EPG5Q9HCE0 2579 aa2.31□□□□□ -2.04
VTA1-204ENST00000491881 IGHV5-10-1A0A0J9YXX1 117 aa2.31□□□□□ -2.04
VTA1-204ENST00000491881 A0A1B0GVX0 72 aa2.31□□□□□ -2.04
VTA1-204ENST00000491881 BET1O15155 118 aa2.31□□□□□ -2.04
VTA1-204ENST00000491881 VAMP5O95183 116 aa2.31□□□□□ -2.04
VTA1-204ENST00000491881 TSPAN13O95857 204 aa2.31□□□□□ -2.04
VTA1-204ENST00000491881 SERPINA5P05154 406 aa2.31□□□□□ -2.04
VTA1-204ENST00000491881 ACSM4P0C7M7 580 aa2.31□□□□□ -2.04
VTA1-204ENST00000491881 CISD3P0C7P0 127 aa2.31□□□□□ -2.04
VTA1-204ENST00000491881 EIF2S2P20042 333 aaKnown RBP2.31□□□□□ -2.04
VTA1-204ENST00000491881 SLC25A11Q02978 314 aaKnown RBP2.31□□□□□ -2.04
VTA1-204ENST00000491881 MXD1Q05195 221 aa2.31□□□□□ -2.04
VTA1-204ENST00000491881 LRRC74AQ0VAA2 488 aa2.31□□□□□ -2.04
VTA1-204ENST00000491881 RGNQ15493 299 aa2.31□□□□□ -2.04
VTA1-204ENST00000491881 STK11Q15831 433 aa2.31□□□□□ -2.04
VTA1-204ENST00000491881 C5orf47Q569G3 176 aa2.31□□□□□ -2.04
VTA1-204ENST00000491881 RAET1LQ5VY80 246 aa2.31□□□□□ -2.04
VTA1-204ENST00000491881 FBXW9Q5XUX1 488 aa2.31□□□□□ -2.04
VTA1-204ENST00000491881 DNAJC24Q6P3W2 148 aa2.31□□□□□ -2.04
VTA1-204ENST00000491881 ARL9Q6T311 187 aa2.31□□□□□ -2.04
VTA1-204ENST00000491881 ZYG11AQ6WRX3 759 aa2.31□□□□□ -2.04
VTA1-204ENST00000491881 RIMKLAQ8IXN7 391 aa2.31□□□□□ -2.04
VTA1-204ENST00000491881 C15orf56Q8N910 161 aa2.31□□□□□ -2.04
VTA1-204ENST00000491881 NOXO1Q8NFA2 376 aa2.31□□□□□ -2.04
VTA1-204ENST00000491881 OR7G2Q8NG99 324 aa2.31□□□□□ -2.04
VTA1-204ENST00000491881 NTAN1Q96AB6 310 aa2.31□□□□□ -2.04
VTA1-204ENST00000491881 NMRK1Q9NWW6 199 aa2.31□□□□□ -2.04
VTA1-204ENST00000491881 ZNRD1Q9P1U0 126 aa2.31□□□□□ -2.04
VTA1-204ENST00000491881 ST3GAL6Q9Y274 331 aa2.31□□□□□ -2.04
VTA1-204ENST00000491881 RRP15Q9Y3B9 282 aaKnown RBP2.31□□□□□ -2.04
VTA1-204ENST00000491881 TMEM14AQ9Y6G1 99 aa2.31□□□□□ -2.04
VTA1-204ENST00000491881 BPTFQ12830 3046 aa2.31□□□□□ -2.04
VTA1-204ENST00000491881 MAPK8IP3Q9UPT6 1336 aa2.31□□□□□ -2.04
VTA1-204ENST00000491881 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP2.31□□□□□ -2.04
VTA1-204ENST00000491881 FHOD3Q2V2M9 1422 aa2.31□□□□□ -2.04
VTA1-204ENST00000491881 KDM5BQ9UGL1 1544 aa2.31□□□□□ -2.04
VTA1-204ENST00000491881 SCN2AQ99250 2005 aa2.3□□□□□ -2.04
VTA1-204ENST00000491881 REV3LO60673 3130 aa2.3□□□□□ -2.04
VTA1-204ENST00000491881 C5orf42Q9H799 3197 aa2.3□□□□□ -2.04
VTA1-204ENST00000491881 TMEM150BA6NC51 233 aa2.3□□□□□ -2.04
VTA1-204ENST00000491881 LRCOL1A6NCL2 159 aa2.3□□□□□ -2.04
VTA1-204ENST00000491881 CCDC169A6NNP5 214 aa2.3□□□□□ -2.04
VTA1-204ENST00000491881 OR5H8P0DN80 308 aa2.3□□□□□ -2.04
VTA1-204ENST00000491881 WARSP23381 471 aaKnown RBP2.3□□□□□ -2.04
VTA1-204ENST00000491881 NPY1RP25929 384 aa2.3□□□□□ -2.04
VTA1-204ENST00000491881 DCKP27707 260 aa2.3□□□□□ -2.04
VTA1-204ENST00000491881 GDI1P31150 447 aa2.3□□□□□ -2.04
VTA1-204ENST00000491881 CEACAM3P40198 252 aa2.3□□□□□ -2.04
VTA1-204ENST00000491881 SLC1A1P43005 524 aa2.3□□□□□ -2.04
VTA1-204ENST00000491881 CSNK1EP49674 416 aaKnown RBP2.3□□□□□ -2.04
VTA1-204ENST00000491881 ZNF138P52744 262 aa2.3□□□□□ -2.04
VTA1-204ENST00000491881 PRMT2P55345 433 aa2.3□□□□□ -2.04
VTA1-204ENST00000491881 ABCA11PQ4W5N1 156 aa2.3□□□□□ -2.04
VTA1-204ENST00000491881 FAM78AQ5JUQ0 283 aa2.3□□□□□ -2.04
VTA1-204ENST00000491881 PRAMEF20Q5VT98 475 aa2.3□□□□□ -2.04
VTA1-204ENST00000491881 CERS6Q6ZMG9 384 aa2.3□□□□□ -2.04
VTA1-204ENST00000491881 Q6ZR03 302 aa2.3□□□□□ -2.04
VTA1-204ENST00000491881 SLC16A14Q7RTX9 510 aa2.3□□□□□ -2.04
VTA1-204ENST00000491881 MMAAQ8IVH4 418 aaKnown RBP2.3□□□□□ -2.04
VTA1-204ENST00000491881 OR10J6PQ8NGY7 276 aa2.3□□□□□ -2.04
VTA1-204ENST00000491881 RAB3IL1Q8TBN0 382 aa2.3□□□□□ -2.04
VTA1-204ENST00000491881 ELMO1Q92556 727 aa2.3□□□□□ -2.04
VTA1-204ENST00000491881 SLC38A4Q969I6 547 aa2.3□□□□□ -2.04
VTA1-204ENST00000491881 DNAJC1Q96KC8 554 aaKnown RBP2.3□□□□□ -2.04
VTA1-204ENST00000491881 ZNF382Q96SR6 550 aa2.3□□□□□ -2.04
VTA1-204ENST00000491881 MICU1Q9BPX6 476 aa2.3□□□□□ -2.04
VTA1-204ENST00000491881 OR51M1Q9H341 326 aa2.3□□□□□ -2.04
VTA1-204ENST00000491881 SYNDIG1Q9H7V2 258 aa2.3□□□□□ -2.04
VTA1-204ENST00000491881 HRASLS2Q9NWW9 162 aa2.3□□□□□ -2.04
VTA1-204ENST00000491881 PITPNC1Q9UKF7 332 aa2.3□□□□□ -2.04
VTA1-204ENST00000491881 RABL2BQ9UNT1 228 aa2.3□□□□□ -2.04
VTA1-204ENST00000491881 KCNE3Q9Y6H6 103 aa2.3□□□□□ -2.04
VTA1-204ENST00000491881 ARHGAP21Q5T5U3 1957 aa2.29□□□□□ -2.04
VTA1-204ENST00000491881 LRP6O75581 1613 aa2.29□□□□□ -2.04
VTA1-204ENST00000491881 SCRIBQ14160 1630 aa2.29□□□□□ -2.04
VTA1-204ENST00000491881 AHDC1Q5TGY3 1603 aaPredicted RBP2.29□□□□□ -2.04
VTA1-204ENST00000491881 ADCY10Q96PN6 1610 aa2.29□□□□□ -2.04
VTA1-204ENST00000491881 IGSF9BQ9UPX0 1349 aa2.29□□□□□ -2.04
VTA1-204ENST00000491881 IGLV1-50A0A075B6I6 118 aa2.29□□□□□ -2.04
VTA1-204ENST00000491881 IGKV6-21A0A0C4DH24 114 aa2.29□□□□□ -2.04
VTA1-204ENST00000491881 AP3B1O00203 1094 aa2.29□□□□□ -2.04
VTA1-204ENST00000491881 RAD51BO15315 384 aa2.29□□□□□ -2.04
VTA1-204ENST00000491881 NUPL2O15504 423 aaKnown RBP2.29□□□□□ -2.04
VTA1-204ENST00000491881 KLHL41O60662 606 aa2.29□□□□□ -2.04
VTA1-204ENST00000491881 FTH1P02794 183 aa2.29□□□□□ -2.04
VTA1-204ENST00000491881 ADRA2AP08913 450 aa2.29□□□□□ -2.04
VTA1-204ENST00000491881 UBTFL6P0CB48 400 aaPredicted RBP2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms