RNA–Protein interactions for RNA: ENST00000490283.1

SEC13-218, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-218ENST00000490283 C4orf45Q96LM5 186 aa14.93□□□□□ -0.02
SEC13-218ENST00000490283 FUZQ9BT04 418 aa14.93□□□□□ -0.02
SEC13-218ENST00000490283 IFT27Q9BW83 186 aa14.93□□□□□ -0.02
SEC13-218ENST00000490283 OR52D1Q9H346 318 aa14.93□□□□□ -0.02
SEC13-218ENST00000490283 CYSLTR2Q9NS75 346 aa14.93□□□□□ -0.02
SEC13-218ENST00000490283 NKIRAS2Q9NYR9 191 aa14.93□□□□□ -0.02
SEC13-218ENST00000490283 IMPA2O14732 288 aa14.92□□□□□ -0.02
SEC13-218ENST00000490283 PPP1R3DO95685 299 aa14.92□□□□□ -0.02
SEC13-218ENST00000490283 TXNDC12O95881 172 aa14.92□□□□□ -0.02
SEC13-218ENST00000490283 RENP00797 406 aa14.92□□□□□ -0.02
SEC13-218ENST00000490283 FAM157CP0CG43 387 aa14.92□□□□□ -0.02
SEC13-218ENST00000490283 GSTM3P21266 225 aa14.92□□□□□ -0.02
SEC13-218ENST00000490283 CALB2P22676 271 aa14.92□□□□□ -0.02
SEC13-218ENST00000490283 ZNF81P51508 661 aa14.92□□□□□ -0.02
SEC13-218ENST00000490283 TMEM33P57088 247 aa14.92□□□□□ -0.02
SEC13-218ENST00000490283 LSM6P62312 80 aaKnown RBP14.92□□□□□ -0.02
SEC13-218ENST00000490283 CCL8P80075 99 aa14.92□□□□□ -0.02
SEC13-218ENST00000490283 RFX4Q33E94 735 aa14.92□□□□□ -0.02
SEC13-218ENST00000490283 ZMAT1Q5H9K5 638 aa14.92□□□□□ -0.02
SEC13-218ENST00000490283 RFPL4BQ6ZWI9 263 aa14.92□□□□□ -0.02
SEC13-218ENST00000490283 LINC00471Q8N535 108 aa14.92□□□□□ -0.02
SEC13-218ENST00000490283 NPEPL1Q8NDH3 523 aa14.92□□□□□ -0.02
SEC13-218ENST00000490283 SLC25A40Q8TBP6 338 aa14.92□□□□□ -0.02
SEC13-218ENST00000490283 GNPDA2Q8TDQ7 276 aa14.92□□□□□ -0.02
SEC13-218ENST00000490283 POP5Q969H6 163 aaKnown RBP14.92□□□□□ -0.02
SEC13-218ENST00000490283 OR2J1Q9GZK6 312 aa14.92□□□□□ -0.02
SEC13-218ENST00000490283 NUAK2Q9H093 628 aa14.92□□□□□ -0.02
SEC13-218ENST00000490283 PLEK2Q9NYT0 353 aa14.92□□□□□ -0.02
SEC13-218ENST00000490283 CGGBP1Q9UFW8 167 aaPredicted RBP14.92□□□□□ -0.02
SEC13-218ENST00000490283 COA3Q9Y2R0 106 aaPredicted RBP14.92□□□□□ -0.02
SEC13-218ENST00000490283 RTTNQ86VV8 2226 aa14.92□□□□□ -0.02
SEC13-218ENST00000490283 CHD3Q12873 2000 aaKnown RBP14.92□□□□□ -0.02
SEC13-218ENST00000490283 PPIHO43447 177 aaKnown RBP14.91□□□□□ -0.02
SEC13-218ENST00000490283 ICMTO60725 284 aa14.91□□□□□ -0.02
SEC13-218ENST00000490283 LILRA1O75019 489 aa14.91□□□□□ -0.02
SEC13-218ENST00000490283 NCR1O76036 304 aa14.91□□□□□ -0.02
SEC13-218ENST00000490283 TUBG1P23258 451 aa14.91□□□□□ -0.02
SEC13-218ENST00000490283 COL8A2P25067 703 aa14.91□□□□□ -0.02
SEC13-218ENST00000490283 LIPAP38571 399 aa14.91□□□□□ -0.02
SEC13-218ENST00000490283 MAGEB1P43366 347 aa14.91□□□□□ -0.02
SEC13-218ENST00000490283 FXYD6P3P58550 94 aa14.91□□□□□ -0.02
SEC13-218ENST00000490283 MBNL2Q5VZF2 373 aaKnown RBP14.91□□□□□ -0.02
SEC13-218ENST00000490283 LEG1Q6P5S2 330 aa14.91□□□□□ -0.02
SEC13-218ENST00000490283 DHFR2Q86XF0 187 aa14.91□□□□□ -0.02
SEC13-218ENST00000490283 LINC01356Q8N9X3 169 aa14.91□□□□□ -0.02
SEC13-218ENST00000490283 OR52L1Q8NGH7 329 aa14.91□□□□□ -0.02
SEC13-218ENST00000490283 KLF14Q8TD94 323 aaPredicted RBP14.91□□□□□ -0.02
SEC13-218ENST00000490283 IPCEF1Q8WWN9 437 aaPredicted RBP14.91□□□□□ -0.02
SEC13-218ENST00000490283 MARS2Q96GW9 593 aaKnown RBP14.91□□□□□ -0.02
SEC13-218ENST00000490283 COG8Q96MW5 612 aa14.91□□□□□ -0.02
SEC13-218ENST00000490283 GPA33Q99795 319 aa14.91□□□□□ -0.02
SEC13-218ENST00000490283 SAP30LQ9HAJ7 183 aa14.91□□□□□ -0.02
SEC13-218ENST00000490283 TUBG2Q9NRH3 451 aa14.91□□□□□ -0.02
SEC13-218ENST00000490283 ZNF275Q9NSD4 429 aaPredicted RBP14.91□□□□□ -0.02
SEC13-218ENST00000490283 ASH2LQ9UBL3 628 aa14.91□□□□□ -0.02
SEC13-218ENST00000490283 TNFRSF11BO00300 401 aa14.9□□□□□ -0.02
SEC13-218ENST00000490283 ARPC3O15145 178 aa14.9□□□□□ -0.02
SEC13-218ENST00000490283 IDH3BO43837 385 aa14.9□□□□□ -0.02
SEC13-218ENST00000490283 SCG5P05408 212 aa14.9□□□□□ -0.02
SEC13-218ENST00000490283 MPV17P39210 176 aa14.9□□□□□ -0.02
SEC13-218ENST00000490283 CDKN2AP42771 156 aaKnown RBP14.9□□□□□ -0.02
SEC13-218ENST00000490283 TSPAN31Q12999 210 aa14.9□□□□□ -0.02
SEC13-218ENST00000490283 CCNIQ14094 377 aa14.9□□□□□ -0.02
SEC13-218ENST00000490283 TRIP10Q15642 601 aa14.9□□□□□ -0.02
SEC13-218ENST00000490283 FAM209AQ5JX71 171 aa14.9□□□□□ -0.02
SEC13-218ENST00000490283 RPL13AP3Q6NVV1 102 aa14.9□□□□□ -0.02
SEC13-218ENST00000490283 C1orf94Q6P1W5 598 aa14.9□□□□□ -0.02
SEC13-218ENST00000490283 PTCHD4Q6ZW05 846 aa14.9□□□□□ -0.02
SEC13-218ENST00000490283 VASH1Q7L8A9 365 aaPredicted RBP14.9□□□□□ -0.02
SEC13-218ENST00000490283 SAMD8Q96LT4 415 aa14.9□□□□□ -0.02
SEC13-218ENST00000490283 EGLN1Q9GZT9 426 aa14.9□□□□□ -0.02
SEC13-218ENST00000490283 TBCCD1Q9NVR7 557 aa14.9□□□□□ -0.02
SEC13-218ENST00000490283 IGHV1-69-2A0A0G2JMI3 117 aa14.89□□□□□ -0.03
SEC13-218ENST00000490283 SPRY3O43610 288 aa14.89□□□□□ -0.03
SEC13-218ENST00000490283 TIMM8AO60220 97 aaPredicted RBP14.89□□□□□ -0.03
SEC13-218ENST00000490283 CDC14BO60729 498 aa14.89□□□□□ -0.03
SEC13-218ENST00000490283 SRD5A1P18405 259 aa14.89□□□□□ -0.03
SEC13-218ENST00000490283 ATP6V1B2P21281 511 aa14.89□□□□□ -0.03
SEC13-218ENST00000490283 PCMT1P22061 227 aa14.89□□□□□ -0.03
SEC13-218ENST00000490283 IGFBP5P24593 272 aa14.89□□□□□ -0.03
SEC13-218ENST00000490283 GSSP48637 474 aa14.89□□□□□ -0.03
SEC13-218ENST00000490283 TSTQ16762 297 aaKnown RBP14.89□□□□□ -0.03
SEC13-218ENST00000490283 HFEQ30201 348 aa14.89□□□□□ -0.03
SEC13-218ENST00000490283 PGBD2Q6P3X8 592 aa14.89□□□□□ -0.03
SEC13-218ENST00000490283 ZSCAN2Q7Z7L9 614 aaPredicted RBP14.89□□□□□ -0.03
SEC13-218ENST00000490283 YIPF5Q969M3 257 aa14.89□□□□□ -0.03
SEC13-218ENST00000490283 ELMOD3Q96FG2 381 aa14.89□□□□□ -0.03
SEC13-218ENST00000490283 LRGUKQ96M69 825 aa14.89□□□□□ -0.03
SEC13-218ENST00000490283 DIRC2Q96SL1 478 aa14.89□□□□□ -0.03
SEC13-218ENST00000490283 NMNAT3Q96T66 252 aa14.89□□□□□ -0.03
SEC13-218ENST00000490283 NARFLQ9H6Q4 476 aa14.89□□□□□ -0.03
SEC13-218ENST00000490283 MAGIXQ9H6Y5 334 aa14.89□□□□□ -0.03
SEC13-218ENST00000490283 ATPIF1Q9UII2 106 aa14.89□□□□□ -0.03
SEC13-218ENST00000490283 PRPF19Q9UMS4 504 aaKnown RBP14.89□□□□□ -0.03
SEC13-218ENST00000490283 GRIP1Q9Y3R0 1128 aa14.89□□□□□ -0.03
SEC13-218ENST00000490283 CCNB2O95067 398 aa14.88□□□□□ -0.03
SEC13-218ENST00000490283 MPZL1O95297 269 aa14.88□□□□□ -0.03
SEC13-218ENST00000490283 NGFP01138 241 aa14.88□□□□□ -0.03
SEC13-218ENST00000490283 TFP02787 698 aa14.88□□□□□ -0.03
SEC13-218ENST00000490283 HIST1H1CP16403 213 aaKnown RBP14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms