RNA–Protein interactions for RNA: ENST00000486427.1

LTN1-206, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 2

Gene LTN1, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-206ENST00000486427 UBXN8O00124 270 aa2.31□□□□□ -2.04
LTN1-206ENST00000486427 DYNC1I1O14576 645 aa2.31□□□□□ -2.04
LTN1-206ENST00000486427 MRPS12O15235 138 aaKnown RBP2.31□□□□□ -2.04
LTN1-206ENST00000486427 CBR3O75828 277 aa2.31□□□□□ -2.04
LTN1-206ENST00000486427 OR5H8P0DN80 308 aa2.31□□□□□ -2.04
LTN1-206ENST00000486427 CRYBB2P43320 205 aa2.31□□□□□ -2.04
LTN1-206ENST00000486427 YWHAGP61981 247 aaKnown RBP eCLIP2.31□□□□□ -2.04
LTN1-206ENST00000486427 CDH17Q12864 832 aa2.31□□□□□ -2.04
LTN1-206ENST00000486427 RUFY3Q7L099 469 aa2.31□□□□□ -2.04
LTN1-206ENST00000486427 ZFP41Q8N8Y5 198 aa2.31□□□□□ -2.04
LTN1-206ENST00000486427 OR2L3Q8NG85 312 aa2.31□□□□□ -2.04
LTN1-206ENST00000486427 PLPPR1Q8TBJ4 325 aa2.31□□□□□ -2.04
LTN1-206ENST00000486427 PIBF1Q8WXW3 757 aa2.31□□□□□ -2.04
LTN1-206ENST00000486427 SLC25A46Q96AG3 418 aa2.31□□□□□ -2.04
LTN1-206ENST00000486427 SLC38A10Q9HBR0 1119 aa2.31□□□□□ -2.04
LTN1-206ENST00000486427 COX16Q9P0S2 106 aa2.31□□□□□ -2.04
LTN1-206ENST00000486427 OR8U9P0C7N5 309 aa2.3□□□□□ -2.04
LTN1-206ENST00000486427 TAGLN2P37802 199 aaKnown RBP2.3□□□□□ -2.04
LTN1-206ENST00000486427 CEACAM3P40198 252 aa2.3□□□□□ -2.04
LTN1-206ENST00000486427 MRPS22P82650 360 aaKnown RBP2.3□□□□□ -2.04
LTN1-206ENST00000486427 SLC25A11Q02978 314 aaKnown RBP2.3□□□□□ -2.04
LTN1-206ENST00000486427 BST1Q10588 318 aa2.3□□□□□ -2.04
LTN1-206ENST00000486427 ZMYND11Q15326 602 aa2.3□□□□□ -2.04
LTN1-206ENST00000486427 KRTAP21-2Q3LI59 83 aa2.3□□□□□ -2.04
LTN1-206ENST00000486427 SPIN3Q5JUX0 258 aa2.3□□□□□ -2.04
LTN1-206ENST00000486427 AP1ARQ63HQ0 302 aa2.3□□□□□ -2.04
LTN1-206ENST00000486427 ANKRD26P1Q6NSI1 321 aa2.3□□□□□ -2.04
LTN1-206ENST00000486427 METTL13Q8N6R0 699 aa2.3□□□□□ -2.04
LTN1-206ENST00000486427 ST20-AS1Q8NBB2 130 aa2.3□□□□□ -2.04
LTN1-206ENST00000486427 OR13C2Q8NGS9 318 aa2.3□□□□□ -2.04
LTN1-206ENST00000486427 OR13G1Q8NGZ3 307 aa2.3□□□□□ -2.04
LTN1-206ENST00000486427 NTAN1Q96AB6 310 aa2.3□□□□□ -2.04
LTN1-206ENST00000486427 TUBGCP3Q96CW5 907 aa2.3□□□□□ -2.04
LTN1-206ENST00000486427 GCOM2Q9BZD3 368 aaPredicted RBP2.3□□□□□ -2.04
LTN1-206ENST00000486427 SUN2Q9UH99 717 aa2.3□□□□□ -2.04
LTN1-206ENST00000486427 MAPK8IP3Q9UPT6 1336 aa2.29□□□□□ -2.04
LTN1-206ENST00000486427 ARHGEF35A5YM69 484 aa2.29□□□□□ -2.04
LTN1-206ENST00000486427 EEDO75530 441 aaKnown RBP2.29□□□□□ -2.04
LTN1-206ENST00000486427 IFNA8P32881 189 aa2.29□□□□□ -2.04
LTN1-206ENST00000486427 SSR4P51571 173 aa2.29□□□□□ -2.04
LTN1-206ENST00000486427 TPMTP51580 245 aa2.29□□□□□ -2.04
LTN1-206ENST00000486427 RND2P52198 227 aa2.29□□□□□ -2.04
LTN1-206ENST00000486427 RCAN2Q14206 197 aa2.29□□□□□ -2.04
LTN1-206ENST00000486427 MAJINQ3KP22 176 aa2.29□□□□□ -2.04
LTN1-206ENST00000486427 PTX4Q96A99 478 aa2.29□□□□□ -2.04
LTN1-206ENST00000486427 CNDP1Q96KN2 507 aa2.29□□□□□ -2.04
LTN1-206ENST00000486427 KLHL28Q9NXS3 571 aa2.29□□□□□ -2.04
LTN1-206ENST00000486427 ZNF586Q9NXT0 402 aa2.29□□□□□ -2.04
LTN1-206ENST00000486427 LSM7Q9UK45 103 aaKnown RBP2.29□□□□□ -2.04
LTN1-206ENST00000486427 IKZF2Q9UKS7 526 aa2.29□□□□□ -2.04
LTN1-206ENST00000486427 SHANK1Q9Y566 2161 aa2.28□□□□□ -2.04
LTN1-206ENST00000486427 IGLV1-36A0A0B4J1U3 117 aa2.28□□□□□ -2.04
LTN1-206ENST00000486427 CLIC3O95833 236 aa2.28□□□□□ -2.04
LTN1-206ENST00000486427 HLA-DQB1P01920 261 aa2.28□□□□□ -2.04
LTN1-206ENST00000486427 CD3GP09693 182 aa2.28□□□□□ -2.04
LTN1-206ENST00000486427 P0C880 135 aa2.28□□□□□ -2.04
LTN1-206ENST00000486427 ZNF250P15622 560 aa2.28□□□□□ -2.04
LTN1-206ENST00000486427 PLP1P60201 277 aa2.28□□□□□ -2.04
LTN1-206ENST00000486427 UBE2NP61088 152 aaKnown RBP2.28□□□□□ -2.04
LTN1-206ENST00000486427 BST2Q10589 180 aaKnown RBP2.28□□□□□ -2.04
LTN1-206ENST00000486427 IL15RAQ13261 267 aa2.28□□□□□ -2.04
LTN1-206ENST00000486427 TAF9Q16594 264 aa2.28□□□□□ -2.04
LTN1-206ENST00000486427 CCDC73Q6ZRK6 1079 aa2.28□□□□□ -2.04
LTN1-206ENST00000486427 OR9A2Q8NGT5 310 aa2.28□□□□□ -2.04
LTN1-206ENST00000486427 GALNT14Q96FL9 552 aa2.28□□□□□ -2.04
LTN1-206ENST00000486427 PKNOX2Q96KN3 472 aa2.28□□□□□ -2.04
LTN1-206ENST00000486427 LHX5Q9H2C1 402 aa2.28□□□□□ -2.04
LTN1-206ENST00000486427 ETNK2Q9NVF9 386 aa2.28□□□□□ -2.04
LTN1-206ENST00000486427 REM1O75628 298 aa2.27□□□□□ -2.05
LTN1-206ENST00000486427 CLPXO76031 633 aa2.27□□□□□ -2.05
LTN1-206ENST00000486427 NDUFB10O96000 172 aa2.27□□□□□ -2.05
LTN1-206ENST00000486427 SERPIND1P05546 499 aa2.27□□□□□ -2.05
LTN1-206ENST00000486427 MCF2P10911 925 aa2.27□□□□□ -2.05
LTN1-206ENST00000486427 SLC2A3P11169 496 aa2.27□□□□□ -2.05
LTN1-206ENST00000486427 SRSF5Q13243 272 aaKnown RBP2.27□□□□□ -2.05
LTN1-206ENST00000486427 DDX39BQ13838 428 aaKnown RBP2.27□□□□□ -2.05
LTN1-206ENST00000486427 TGFBIQ15582 683 aa2.27□□□□□ -2.05
LTN1-206ENST00000486427 AVPI1Q5T686 147 aa2.27□□□□□ -2.05
LTN1-206ENST00000486427 PRAMEF5Q5TYX0 476 aa2.27□□□□□ -2.05
LTN1-206ENST00000486427 PRAMEF6Q5VXH4 476 aa2.27□□□□□ -2.05
LTN1-206ENST00000486427 NBPF5PQ86XG9 351 aaPredicted RBP2.27□□□□□ -2.05
LTN1-206ENST00000486427 TMEM105Q8N8V8 129 aa2.27□□□□□ -2.05
LTN1-206ENST00000486427 OR1P1Q8NH06 330 aa2.27□□□□□ -2.05
LTN1-206ENST00000486427 SHC3Q92529 594 aa2.27□□□□□ -2.05
LTN1-206ENST00000486427 TBL1YQ9BQ87 522 aa2.27□□□□□ -2.05
LTN1-206ENST00000486427 FGF23Q9GZV9 251 aaPredicted RBP2.27□□□□□ -2.05
LTN1-206ENST00000486427 DHCR7Q9UBM7 475 aaKnown RBP2.27□□□□□ -2.05
LTN1-206ENST00000486427 GOLT1BQ9Y3E0 138 aa2.27□□□□□ -2.05
LTN1-206ENST00000486427 HYOU1Q9Y4L1 999 aa2.27□□□□□ -2.05
LTN1-206ENST00000486427 IGHV3OR16-8A0A075B7F1 116 aa2.26□□□□□ -2.05
LTN1-206ENST00000486427 SYNJ2BP-COX16A0A087WUM0 186 aa2.26□□□□□ -2.05
LTN1-206ENST00000486427 FAM47DPA6NHR8 397 aa2.26□□□□□ -2.05
LTN1-206ENST00000486427 C16orf90A8MZG2 172 aa2.26□□□□□ -2.05
LTN1-206ENST00000486427 L7N2F9 121 aa2.26□□□□□ -2.05
LTN1-206ENST00000486427 CDC7O00311 574 aa2.26□□□□□ -2.05
LTN1-206ENST00000486427 SERPINA3P01011 423 aa2.26□□□□□ -2.05
LTN1-206ENST00000486427 CST1P01037 141 aa2.26□□□□□ -2.05
LTN1-206ENST00000486427 IL1RNP18510 177 aa2.26□□□□□ -2.05
LTN1-206ENST00000486427 NCF2P19878 526 aaPredicted RBP2.26□□□□□ -2.05
LTN1-206ENST00000486427 F2RP25116 425 aa2.26□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms