RNA–Protein interactions for RNA: ENST00000483851.6

SHOX2-204, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SHOX2, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-204ENST00000483851 PNPLA5Q7Z6Z6 429 aaPredicted RBP23.27■■□□□ 1.32
SHOX2-204ENST00000483851 NR2C2APQ86WQ0 139 aa23.27■■□□□ 1.32
SHOX2-204ENST00000483851 HPS1Q92902 700 aa23.27■■□□□ 1.32
SHOX2-204ENST00000483851 COMMD4Q9H0A8 199 aa23.27■■□□□ 1.32
SHOX2-204ENST00000483851 PPIL3Q9H2H8 161 aaKnown RBP23.27■■□□□ 1.32
SHOX2-204ENST00000483851 KCNMB2Q9Y691 235 aa23.27■■□□□ 1.32
SHOX2-204ENST00000483851 DMXL1Q9Y485 3027 aa23.27■■□□□ 1.32
SHOX2-204ENST00000483851 A0A1W2PPL8 197 aa23.26■■□□□ 1.31
SHOX2-204ENST00000483851 DCTDP32321 178 aa23.26■■□□□ 1.31
SHOX2-204ENST00000483851 ASAH1Q13510 395 aa23.26■■□□□ 1.31
SHOX2-204ENST00000483851 RSPO4Q2I0M5 234 aaPredicted RBP23.26■■□□□ 1.31
SHOX2-204ENST00000483851 DEFB109BQ30KR1 87 aa23.26■■□□□ 1.31
SHOX2-204ENST00000483851 NRARPQ7Z6K4 114 aa23.26■■□□□ 1.31
SHOX2-204ENST00000483851 CELF2-AS1Q8N7Q2 184 aa23.26■■□□□ 1.31
SHOX2-204ENST00000483851 RNF133Q8WVZ7 376 aa23.26■■□□□ 1.31
SHOX2-204ENST00000483851 COMMD3Q9UBI1 195 aa23.26■■□□□ 1.31
SHOX2-204ENST00000483851 OR4C45A6NMZ5 311 aa23.26■■□□□ 1.31
SHOX2-204ENST00000483851 ZNF879B4DU55 563 aa23.26■■□□□ 1.31
SHOX2-204ENST00000483851 GFRA3O60609 400 aa23.26■■□□□ 1.31
SHOX2-204ENST00000483851 PTBP1P26599 531 aaKnown RBP eCLIP23.26■■□□□ 1.315e-6■■■■□ 24.3
SHOX2-204ENST00000483851 MAPK3P27361 379 aaPredicted RBP23.26■■□□□ 1.31
SHOX2-204ENST00000483851 GUCA1AP43080 201 aaPredicted RBP23.26■■□□□ 1.31
SHOX2-204ENST00000483851 LSM6P62312 80 aaKnown RBP23.26■■□□□ 1.31
SHOX2-204ENST00000483851 SPATC1Q76KD6 591 aa23.26■■□□□ 1.31
SHOX2-204ENST00000483851 FCRLAQ7L513 359 aa23.26■■□□□ 1.31
SHOX2-204ENST00000483851 C20orf196Q8IYI0 205 aa23.26■■□□□ 1.31
SHOX2-204ENST00000483851 ZBTB8BQ8NAP8 495 aaPredicted RBP23.26■■□□□ 1.31
SHOX2-204ENST00000483851 HSD17B8Q92506 261 aa23.26■■□□□ 1.31
SHOX2-204ENST00000483851 C4orf45Q96LM5 186 aa23.26■■□□□ 1.31
SHOX2-204ENST00000483851 SLC6A15Q9H2J7 730 aa23.26■■□□□ 1.31
SHOX2-204ENST00000483851 C1orf198Q9H425 327 aa23.26■■□□□ 1.31
SHOX2-204ENST00000483851 TRAV17A0A0B4J275 112 aa23.25■■□□□ 1.31
SHOX2-204ENST00000483851 EVX1P49640 407 aa23.25■■□□□ 1.31
SHOX2-204ENST00000483851 SCN1BQ07699 218 aa23.25■■□□□ 1.31
SHOX2-204ENST00000483851 RIN1Q13671 783 aa23.25■■□□□ 1.31
SHOX2-204ENST00000483851 ACOT12Q8WYK0 555 aa23.25■■□□□ 1.31
SHOX2-204ENST00000483851 ZDHHC11Q9H8X9 412 aa23.25■■□□□ 1.31
SHOX2-204ENST00000483851 SEC61A2Q9H9S3 476 aa23.25■■□□□ 1.31
SHOX2-204ENST00000483851 LRP12Q9Y561 859 aa23.25■■□□□ 1.31
SHOX2-204ENST00000483851 IGKV3D-15A0A087WSY6 115 aa23.24■■□□□ 1.31
SHOX2-204ENST00000483851 DLL1O00548 723 aa23.24■■□□□ 1.31
SHOX2-204ENST00000483851 HPGDSO60760 199 aa23.24■■□□□ 1.31
SHOX2-204ENST00000483851 CNIH2Q6PI25 160 aa23.24■■□□□ 1.31
SHOX2-204ENST00000483851 KCTD12Q96CX2 325 aaKnown RBP23.24■■□□□ 1.31
SHOX2-204ENST00000483851 SMAD5Q99717 465 aaKnown RBP23.24■■□□□ 1.31
SHOX2-204ENST00000483851 GPR171O14626 319 aa23.24■■□□□ 1.31
SHOX2-204ENST00000483851 SLC43A1O75387 559 aa23.24■■□□□ 1.31
SHOX2-204ENST00000483851 Q499Y3 187 aa23.24■■□□□ 1.31
SHOX2-204ENST00000483851 OR13C5Q8NGS8 318 aa23.24■■□□□ 1.31
SHOX2-204ENST00000483851 OR2AJ1Q8NGZ0 328 aa23.24■■□□□ 1.31
SHOX2-204ENST00000483851 ROBO4Q8WZ75 1007 aa23.24■■□□□ 1.31
SHOX2-204ENST00000483851 TMEM45BQ96B21 275 aa23.24■■□□□ 1.31
SHOX2-204ENST00000483851 PTPRZ1P23471 2315 aaPredicted RBP23.23■■□□□ 1.31
SHOX2-204ENST00000483851 DHHO43323 396 aa23.23■■□□□ 1.31
SHOX2-204ENST00000483851 HLA-DQB1P01920 261 aa23.23■■□□□ 1.31
SHOX2-204ENST00000483851 EIF2B2P49770 351 aaKnown RBP23.23■■□□□ 1.31
SHOX2-204ENST00000483851 OTPQ5XKR4 325 aa23.23■■□□□ 1.31
SHOX2-204ENST00000483851 MZT2AQ6P582 158 aa23.23■■□□□ 1.31
SHOX2-204ENST00000483851 NEDD4LQ96PU5 975 aa23.23■■□□□ 1.31
SHOX2-204ENST00000483851 OR14A2Q96R54 314 aa23.23■■□□□ 1.31
SHOX2-204ENST00000483851 KLK13Q9UKR3 277 aa23.23■■□□□ 1.31
SHOX2-204ENST00000483851 TRBV5-5A0A0J9YX44 114 aa23.22■■□□□ 1.31
SHOX2-204ENST00000483851 TMEM127O75204 238 aa23.22■■□□□ 1.31
SHOX2-204ENST00000483851 SYNGR4O95473 234 aa23.22■■□□□ 1.31
SHOX2-204ENST00000483851 RAF1P04049 648 aa23.22■■□□□ 1.31
SHOX2-204ENST00000483851 SELENOPP49908 381 aa23.22■■□□□ 1.31
SHOX2-204ENST00000483851 HSD17B12Q53GQ0 312 aa23.22■■□□□ 1.31
SHOX2-204ENST00000483851 LINC00346Q8IVM7 164 aa23.22■■□□□ 1.31
SHOX2-204ENST00000483851 PRSS35Q8N3Z0 413 aa23.22■■□□□ 1.31
SHOX2-204ENST00000483851 ZNF676Q8N7Q3 588 aa23.22■■□□□ 1.31
SHOX2-204ENST00000483851 RGP1Q92546 391 aaPredicted RBP23.22■■□□□ 1.31
SHOX2-204ENST00000483851 NELFAQ9H3P2 528 aa23.22■■□□□ 1.31
SHOX2-204ENST00000483851 NIPAL2Q9H841 368 aa23.22■■□□□ 1.31
SHOX2-204ENST00000483851 RNF122Q9H9V4 155 aa23.22■■□□□ 1.31
SHOX2-204ENST00000483851 MCTS1Q9ULC4 181 aaKnown RBP23.22■■□□□ 1.31
SHOX2-204ENST00000483851 R4GMQ9 66 aa23.22■■□□□ 1.31
SHOX2-204ENST00000483851 ZNF84P51523 738 aa23.22■■□□□ 1.31
SHOX2-204ENST00000483851 FAM27D1Q5T7N8 215 aa23.22■■□□□ 1.31
SHOX2-204ENST00000483851 OR7E24Q6IFN5 339 aa23.22■■□□□ 1.31
SHOX2-204ENST00000483851 AAED1Q7RTV5 226 aa23.22■■□□□ 1.31
SHOX2-204ENST00000483851 HIST2H2ABQ8IUE6 130 aaPredicted RBP23.22■■□□□ 1.31
SHOX2-204ENST00000483851 GPR148Q8TDV2 347 aa23.22■■□□□ 1.31
SHOX2-204ENST00000483851 SLAMF6Q96DU3 332 aa23.22■■□□□ 1.31
SHOX2-204ENST00000483851 ULBP2Q9BZM5 246 aa23.22■■□□□ 1.31
SHOX2-204ENST00000483851 POLR1DQ9Y2S0 133 aa23.22■■□□□ 1.31
SHOX2-204ENST00000483851 LHFPL6Q9Y693 200 aa23.22■■□□□ 1.31
SHOX2-204ENST00000483851 DCDC2BA2VCK2 349 aa23.21■■□□□ 1.31
SHOX2-204ENST00000483851 ANKRD61A6NGH8 418 aa23.21■■□□□ 1.31
SHOX2-204ENST00000483851 EFSO43281 561 aa23.21■■□□□ 1.31
SHOX2-204ENST00000483851 SRSF10O75494 262 aaKnown RBP23.21■■□□□ 1.31
SHOX2-204ENST00000483851 H2BFMP0C1H6 154 aa23.21■■□□□ 1.31
SHOX2-204ENST00000483851 MSR1P21757 451 aa23.21■■□□□ 1.31
SHOX2-204ENST00000483851 APEX1P27695 318 aaKnown RBP23.21■■□□□ 1.31
SHOX2-204ENST00000483851 THBS2P35442 1172 aa23.21■■□□□ 1.31
SHOX2-204ENST00000483851 WDR38Q5JTN6 314 aa23.21■■□□□ 1.31
SHOX2-204ENST00000483851 RIPPLY2Q5TAB7 128 aa23.21■■□□□ 1.31
SHOX2-204ENST00000483851 CATSPERDQ86XM0 798 aa23.21■■□□□ 1.31
SHOX2-204ENST00000483851 ZNF845Q96IR2 970 aaPredicted RBP23.21■■□□□ 1.31
SHOX2-204ENST00000483851 DERL3Q96Q80 235 aa23.21■■□□□ 1.31
SHOX2-204ENST00000483851 ZCCHC4Q9H5U6 513 aa23.21■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms