RNA–Protein interactions for RNA: ENST00000483778.5

ATG4B-221, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 3

Gene ATG4B, Length 1,103 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-221ENST00000483778 SLC7A13Q8TCU3 470 aa15.22■□□□□ 0.03
ATG4B-221ENST00000483778 C22orf15Q8WYQ4 148 aa15.22■□□□□ 0.03
ATG4B-221ENST00000483778 SLC6A7Q99884 636 aa15.22■□□□□ 0.03
ATG4B-221ENST00000483778 GAL3ST1Q99999 423 aa15.22■□□□□ 0.03
ATG4B-221ENST00000483778 ESM1Q9NQ30 184 aa15.22■□□□□ 0.03
ATG4B-221ENST00000483778 UBAP1Q9NZ09 502 aa15.22■□□□□ 0.03
ATG4B-221ENST00000483778 IL20RAQ9UHF4 553 aa15.22■□□□□ 0.03
ATG4B-221ENST00000483778 ISPDA4D126 451 aa15.21■□□□□ 0.03
ATG4B-221ENST00000483778 GMNCA6NCL1 334 aa15.21■□□□□ 0.03
ATG4B-221ENST00000483778 GSTA4O15217 222 aa15.21■□□□□ 0.03
ATG4B-221ENST00000483778 CD55P08174 381 aa15.21■□□□□ 0.03
ATG4B-221ENST00000483778 FXYD6P3P58550 94 aa15.21■□□□□ 0.03
ATG4B-221ENST00000483778 HILS1P60008 231 aa15.21■□□□□ 0.03
ATG4B-221ENST00000483778 TNFAIP6P98066 277 aaPredicted RBP15.21■□□□□ 0.03
ATG4B-221ENST00000483778 MTX3Q5HYI7 312 aa15.21■□□□□ 0.03
ATG4B-221ENST00000483778 DCAF12L2Q5VW00 463 aa15.21■□□□□ 0.03
ATG4B-221ENST00000483778 FKBP9P1Q75LS8 142 aa15.21■□□□□ 0.03
ATG4B-221ENST00000483778 VASH1Q7L8A9 365 aaPredicted RBP15.21■□□□□ 0.03
ATG4B-221ENST00000483778 SYT9Q86SS6 491 aa15.21■□□□□ 0.03
ATG4B-221ENST00000483778 FNDC8Q8TC99 324 aa15.21■□□□□ 0.03
ATG4B-221ENST00000483778 ZNF418Q8TF45 676 aaPredicted RBP15.21■□□□□ 0.03
ATG4B-221ENST00000483778 CMBLQ96DG6 245 aa15.21■□□□□ 0.03
ATG4B-221ENST00000483778 TIMD4Q96H15 378 aa15.21■□□□□ 0.03
ATG4B-221ENST00000483778 FAM46AQ96IP4 442 aaKnown RBP15.21■□□□□ 0.03
ATG4B-221ENST00000483778 RERGLQ9H628 205 aa15.21■□□□□ 0.03
ATG4B-221ENST00000483778 ELOVL3Q9HB03 270 aa15.21■□□□□ 0.03
ATG4B-221ENST00000483778 MMP26Q9NRE1 261 aa15.21■□□□□ 0.03
ATG4B-221ENST00000483778 MRGBPQ9NV56 204 aa15.21■□□□□ 0.03
ATG4B-221ENST00000483778 GRHPRQ9UBQ7 328 aa15.21■□□□□ 0.03
ATG4B-221ENST00000483778 EGFL7Q9UHF1 273 aa15.21■□□□□ 0.03
ATG4B-221ENST00000483778 PURGQ9UJV8 347 aaKnown RBP15.21■□□□□ 0.03
ATG4B-221ENST00000483778 ENPP4Q9Y6X5 453 aa15.21■□□□□ 0.03
ATG4B-221ENST00000483778 A0A0G2JMP0 313 aa15.2■□□□□ 0.02
ATG4B-221ENST00000483778 TEX13CA0A0J9YWL9 993 aa15.2■□□□□ 0.02
ATG4B-221ENST00000483778 A0A0X1KG70 313 aa15.2■□□□□ 0.02
ATG4B-221ENST00000483778 PRSS37A4D1T9 235 aa15.2■□□□□ 0.02
ATG4B-221ENST00000483778 TRAPPC2LH3BP13 241 aa15.2■□□□□ 0.02
ATG4B-221ENST00000483778 TIMM8AO60220 97 aaPredicted RBP15.2■□□□□ 0.02
ATG4B-221ENST00000483778 ABHD16AO95870 558 aa15.2■□□□□ 0.02
ATG4B-221ENST00000483778 FSHBP01225 129 aa15.2■□□□□ 0.02
ATG4B-221ENST00000483778 IGHV2-70P01814 119 aa15.2■□□□□ 0.02
ATG4B-221ENST00000483778 DBHP09172 617 aa15.2■□□□□ 0.02
ATG4B-221ENST00000483778 NR2C1P13056 603 aa15.2■□□□□ 0.02
ATG4B-221ENST00000483778 IFNA8P32881 189 aa15.2■□□□□ 0.02
ATG4B-221ENST00000483778 GUCA1AP43080 201 aaPredicted RBP15.2■□□□□ 0.02
ATG4B-221ENST00000483778 HTR5AP47898 357 aa15.2■□□□□ 0.02
ATG4B-221ENST00000483778 SEC61A1P61619 476 aaKnown RBP15.2■□□□□ 0.02
ATG4B-221ENST00000483778 SEC23BQ15437 767 aa15.2■□□□□ 0.02
ATG4B-221ENST00000483778 ANKDD1AQ495B1 522 aa15.2■□□□□ 0.02
ATG4B-221ENST00000483778 CCDC92Q53HC0 331 aaPredicted RBP15.2■□□□□ 0.02
ATG4B-221ENST00000483778 C1orf94Q6P1W5 598 aa15.2■□□□□ 0.02
ATG4B-221ENST00000483778 PTCHD4Q6ZW05 846 aa15.2■□□□□ 0.02
ATG4B-221ENST00000483778 FAM86B1Q8N7N1 296 aa15.2■□□□□ 0.02
ATG4B-221ENST00000483778 OR2Z1Q8NG97 314 aa15.2■□□□□ 0.02
ATG4B-221ENST00000483778 OR4M2Q8NGB6 313 aa15.2■□□□□ 0.02
ATG4B-221ENST00000483778 GPA33Q99795 319 aa15.2■□□□□ 0.02
ATG4B-221ENST00000483778 PLA2G12AQ9BZM1 189 aa15.2■□□□□ 0.02
ATG4B-221ENST00000483778 EGLN1Q9GZT9 426 aa15.2■□□□□ 0.02
ATG4B-221ENST00000483778 CCDC134Q9H6E4 229 aa15.2■□□□□ 0.02
ATG4B-221ENST00000483778 C7orf69Q9H7B7 122 aa15.2■□□□□ 0.02
ATG4B-221ENST00000483778 CYSLTR2Q9NS75 346 aa15.2■□□□□ 0.02
ATG4B-221ENST00000483778 ZDHHC8Q9ULC8 765 aa15.2■□□□□ 0.02
ATG4B-221ENST00000483778 SIGLEC7Q9Y286 467 aa15.2■□□□□ 0.02
ATG4B-221ENST00000483778 COA3Q9Y2R0 106 aaPredicted RBP15.2■□□□□ 0.02
ATG4B-221ENST00000483778 SLC22A2O15244 555 aa15.19■□□□□ 0.02
ATG4B-221ENST00000483778 SGCEO43556 437 aa15.19■□□□□ 0.02
ATG4B-221ENST00000483778 DOK2O60496 412 aa15.19■□□□□ 0.02
ATG4B-221ENST00000483778 SLC16A7O60669 478 aa15.19■□□□□ 0.02
ATG4B-221ENST00000483778 DIRAS1O95057 198 aa15.19■□□□□ 0.02
ATG4B-221ENST00000483778 COX5BP10606 129 aa15.19■□□□□ 0.02
ATG4B-221ENST00000483778 LIPAP38571 399 aa15.19■□□□□ 0.02
ATG4B-221ENST00000483778 CDKN2AP42771 156 aaKnown RBP15.19■□□□□ 0.02
ATG4B-221ENST00000483778 LIMS1P48059 325 aa15.19■□□□□ 0.02
ATG4B-221ENST00000483778 ARHGDIAP52565 204 aa15.19■□□□□ 0.02
ATG4B-221ENST00000483778 HLXQ14774 488 aaPredicted RBP15.19■□□□□ 0.02
ATG4B-221ENST00000483778 UNQ6126/PRO20091Q6UXV3 157 aa15.19■□□□□ 0.02
ATG4B-221ENST00000483778 ZDHHC22Q8N966 263 aa15.19■□□□□ 0.02
ATG4B-221ENST00000483778 FAM156AQ8NDB6 213 aa15.19■□□□□ 0.02
ATG4B-221ENST00000483778 ZFAND2BQ8WV99 257 aa15.19■□□□□ 0.02
ATG4B-221ENST00000483778 ITLN1Q8WWA0 313 aa15.19■□□□□ 0.02
ATG4B-221ENST00000483778 DVL3Q92997 716 aaPredicted RBP15.19■□□□□ 0.02
ATG4B-221ENST00000483778 HAVCR1Q96D42 359 aa15.19■□□□□ 0.02
ATG4B-221ENST00000483778 C7orf34Q96L11 122 aa15.19■□□□□ 0.02
ATG4B-221ENST00000483778 ZNF570Q96NI8 536 aa15.19■□□□□ 0.02
ATG4B-221ENST00000483778 TSSK2Q96PF2 358 aa15.19■□□□□ 0.02
ATG4B-221ENST00000483778 SYT4Q9H2B2 425 aa15.19■□□□□ 0.02
ATG4B-221ENST00000483778 TBCCD1Q9NVR7 557 aa15.19■□□□□ 0.02
ATG4B-221ENST00000483778 NDUFAF4Q9P032 175 aa15.19■□□□□ 0.02
ATG4B-221ENST00000483778 IER3IP1Q9Y5U9 82 aa15.19■□□□□ 0.02
ATG4B-221ENST00000483778 NPTNQ9Y639 398 aa15.19■□□□□ 0.02
ATG4B-221ENST00000483778 TRBV4-1A0A0J9YWV2 114 aa15.18■□□□□ 0.02
ATG4B-221ENST00000483778 TMEM89A2RUT3 159 aa15.18■□□□□ 0.02
ATG4B-221ENST00000483778 H3BSA7 217 aa15.18■□□□□ 0.02
ATG4B-221ENST00000483778 DCTN6O00399 190 aa15.18■□□□□ 0.02
ATG4B-221ENST00000483778 SOCS2O14508 198 aa15.18■□□□□ 0.02
ATG4B-221ENST00000483778 RER1O15258 196 aa15.18■□□□□ 0.02
ATG4B-221ENST00000483778 KITLGP21583 273 aa15.18■□□□□ 0.02
ATG4B-221ENST00000483778 OMPP47874 163 aa15.18■□□□□ 0.02
ATG4B-221ENST00000483778 RSPO1Q2MKA7 263 aaPredicted RBP15.18■□□□□ 0.02
ATG4B-221ENST00000483778 USP43Q70EL4 1123 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms